Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G2936 Erigeron canadensis HOM05D007695 ORTHO05D009675 1.4e-66 256.5 165 100.0
HanXRQChr15g0494421 Helianthus annuus HOM05D007695 ORTHO05D009675 2.1e-38 162.9 102 78.4
Lsat_1_v5_gn_7_110340 Lactuca sativa HOM05D007695 ORTHO05D009675 4.7e-35 151.8 86 82.6
Hma1.2p1_0119F.1_g056770 Hydrangea macrophylla HOM05D007695 ORTHO05D009675 9.0e-26 120.9 81 67.9
MD10G1206200 Malus domestica HOM05D007695 ORTHO05D009675 9.0e-26 120.9 93 66.7
Duzib213G0064 Durio zibethinus HOM05D007695 ORTHO05D009675 1.5e-25 120.2 85 68.2
QL04p080880 Quercus lobata HOM05D007695 ORTHO05D009675 2.6e-25 119.4 83 66.3
SalBow8G0946 Salvia bowleyana HOM05D007695 ORTHO05D009675 7.6e-25 117.9 89 61.8
GSVIVG01036789001 Vitis vinifera HOM05D007695 ORTHO05D009675 9.9e-25 117.5 120 53.3
Dinv19595 Davidia involucrata HOM05D007695 ORTHO05D009675 1.7e-24 116.7 73 72.6
Gohir.A13G123700 Gossypium hirsutum HOM05D007695 ORTHO05D009675 1.7e-24 116.7 82 68.3
Gohir.D13G127533 Gossypium hirsutum HOM05D007695 ORTHO05D009675 2.2e-24 116.3 83 67.5
Gorai.013G142800 Gossypium raimondii HOM05D007695 ORTHO05D009675 2.2e-24 116.3 83 67.5
Migut.M01534 Erythranthe guttata HOM05D007695 ORTHO05D009675 3.8e-24 115.5 90 64.4
Ciclev10006169m.g Citrus clementina HOM05D007695 ORTHO05D009675 4.9e-24 115.2 83 63.9
MSTRG.7074 Avicennia marina HOM05D007695 ORTHO05D009675 6.4e-24 114.8 83 63.9
CsaV3_7G022890 Cucumis sativus L. HOM05D007695 ORTHO05D009675 6.4e-24 114.8 90 63.3
Thecc.07G171400 Theobroma cacao HOM05D007695 ORTHO05D009675 6.4e-24 114.8 89 65.2
MD05G1224500 Malus domestica HOM05D007695 ORTHO05D009675 8.4e-24 114.4 82 68.3
Duzib187G1742 Durio zibethinus HOM05D000001 ORTHO05D000003 1.4e-23 113.6 87 63.2
COL.COLO4_32235 Corchorus olitorius HOM05D007695 ORTHO05D009675 1.9e-23 113.2 80 66.2
RcHm_v2.0_Chr5g0025651 Rosa chinensis HOM05D007695 ORTHO05D009675 1.9e-23 113.2 72 72.2
ClCG09G022690 Citrullus lanatus HOM05D007695 ORTHO05D009675 3.2e-23 112.5 77 67.5
CSS0012508 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 4.2e-23 112.1 98 59.2
CiPaw.11G064100 Carya illinoinensis HOM05D007695 ORTHO05D009675 4.2e-23 112.1 85 62.4
DCAR_016834 Daucus carota HOM05D007695 ORTHO05D009675 4.2e-23 112.1 84 60.7
Oeu034976.1 Olea europaea HOM05D000672 ORTHO05D009675 4.2e-23 112.1 106 55.7
Psat1g013560 Pisum sativum HOM05D007695 ORTHO05D009675 7.1e-23 111.3 74 68.9
Actinidia37127 Actinidia chinensis HOM05D007695 ORTHO05D009675 9.3e-23 110.9 81 61.7
FAN11G1768 Fragaria x ananassa HOM05D007695 ORTHO05D009675 9.3e-23 110.9 72 70.8
FAN21G0117 Fragaria x ananassa HOM05D007695 ORTHO05D009675 9.3e-23 110.9 72 70.8
FAN25G3643 Fragaria x ananassa HOM05D007695 ORTHO05D009675 9.3e-23 110.9 72 70.8
EL10Ac2g03268 Beta vulgaris HOM05D007695 ORTHO05D009675 1.2e-22 110.5 82 65.9
vmacro09774 Vaccinium macrocarpon HOM05D007695 ORTHO05D009675 1.2e-22 110.5 82 59.8
Eucgr.F04454 Eucalyptus grandis HOM05D007695 ORTHO05D009675 2.7e-22 109.4 83 63.9
VMungo0147G0001 Vigna mungo HOM05D007695 ORTHO05D009675 2.7e-22 109.4 96 58.3
Cfa010552 Carpinus fangiana HOM05D007695 ORTHO05D009675 3.5e-22 109.0 85 60.0
Sed0008622 Sechium edule HOM05D007695 ORTHO05D009675 3.5e-22 109.0 91 57.1
Aqoxy1G01977 Aquilegia oxysepala HOM05D007695 ORTHO05D009675 4.6e-22 108.6 87 58.6
Glyma.08G167800 Glycine max HOM05D007695 ORTHO05D009675 4.6e-22 108.6 74 64.9
Os02g0170200 Oryza sativa ssp. japonica HOM05D007695 ORTHO05D009675 4.6e-22 108.6 75 68.0
Zm00001eb233100 Zea mays HOM05D007695 ORTHO05D009675 4.6e-22 108.6 75 68.0
CANSAT80G0100 Cannabis sativa HOM05D007695 ORTHO05D009675 7.9e-22 107.8 73 65.8
CAN.G610.6 Capsicum annuum HOM05D007695 ORTHO05D009675 7.9e-22 107.8 74 68.9
Glyma.15G259802 Glycine max HOM05D007695 ORTHO05D009675 7.9e-22 107.8 73 67.1
Rhsim04G0004200 Rhododendron simsii HOM05D007695 ORTHO05D009675 1.3e-21 107.1 82 57.3
TWI32G1143 Tripterygium wilfordii HOM05D007695 ORTHO05D009675 1.3e-21 107.1 83 59.0
HPP92_016681 Vanilla planifolia HOM05D007695 ORTHO05D009675 1.3e-21 107.1 71 67.6
Lj3g0020370 Lotus japonicus HOM05D007695 ORTHO05D009675 1.8e-21 106.7 93 58.1
SGA_v2.0_scaffold7G03606 Striga asiatica HOM05D007695 ORTHO05D009675 1.8e-21 106.7 81 60.5
TPR.G33812 Trifolium pratense HOM05D007695 ORTHO05D009675 1.8e-21 106.7 83 61.4
FvH4_3g15210 Fragaria vesca HOM05D007695 ORTHO05D009675 2.3e-21 106.3 72 68.1
Potri.007G068500 Populus trichocarpa HOM05D007695 ORTHO05D009675 2.3e-21 106.3 80 61.2
BcaB02g08673 Brassica carinata HOM05D007695 ORTHO05D009675 3.0e-21 105.9 91 56.0
AUR62037645 Chenopodium quinoa HOM05D007695 ORTHO05D009675 3.0e-21 105.9 82 59.8
FAN16G2644 Fragaria x ananassa HOM05D007695 ORTHO05D009675 3.0e-21 105.9 72 68.1
Nitab4.5_0007560g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 3.9e-21 105.5 73 68.5
Potri.005G095700 Populus trichocarpa HOM05D007695 ORTHO05D009675 3.9e-21 105.5 86 60.5
Sc09g0007600 Simmondsia chinensis HOM05D007695 ORTHO05D009675 3.9e-21 105.5 75 65.3
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 6.7e-21 104.8 94 55.3
Sabra05G0078900 Salix brachista HOM05D007695 ORTHO05D009675 6.7e-21 104.8 87 58.6
Sp5g34250 Schrenkiella parvula HOM05D007695 ORTHO05D009675 6.7e-21 104.8 89 56.2
Nitab4.5_0010557g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 8.7e-21 104.4 73 67.1
Peaxi162Scf00225g00098 Petunia axillaris HOM05D007695 ORTHO05D009675 8.7e-21 104.4 111 49.5
Sopen05g004520 Solanum pennellii HOM05D007695 ORTHO05D009675 8.7e-21 104.4 73 68.5
BcaC08g47483 Brassica carinata HOM05D007695 ORTHO05D009675 1.1e-20 104.0 91 54.9
A07p44310 Brassica napus HOM05D007695 ORTHO05D009675 1.1e-20 104.0 91 54.9
C06p53060 Brassica napus HOM05D007695 ORTHO05D009675 1.1e-20 104.0 91 54.9
BolC6t40323H Brassica oleracea HOM05D007695 ORTHO05D009675 1.1e-20 104.0 91 54.9
BraA07t31939Z Brassica rapa HOM05D007695 ORTHO05D009675 1.1e-20 104.0 91 54.9
CARHR072850 Cardamine hirsuta HOM05D007695 ORTHO05D009675 1.9e-20 103.2 89 56.2
Solyc05g008750.3 Solanum lycopersicum HOM05D007695 ORTHO05D009675 1.9e-20 103.2 73 67.1
PGR031G0168 Punica granatum HOM05D007695 ORTHO05D009675 2.5e-20 102.8 74 60.8
Thhalv10019257m.g Eutrema salsugineum HOM05D007695 ORTHO05D009675 4.3e-20 102.1 93 52.7
THA.LOC104808131 Tarenaya hassleriana HOM05D007695 ORTHO05D009675 4.3e-20 102.1 79 58.2
Lalb_Chr25g0284741 Lupinus albus HOM05D007695 ORTHO05D009675 5.6e-20 101.7 73 63.0
PGSC0003DMG400030526 Solanum tuberosum HOM05D007695 ORTHO05D009675 9.6e-20 100.9 73 65.8
AL2G39670 Arabidopsis lyrata HOM05D007695 ORTHO05D009675 1.6e-19 100.1 89 55.1
Carub.0002s2607 Capsella rubella HOM05D007695 ORTHO05D009675 1.6e-19 100.1 71 62.0
Cc05_g01290 Coffea canephora HOM05D007695 ORTHO05D009675 3.6e-19 99.0 72 62.5
Aa31LG4G1810 Aethionema arabicum HOM05D007695 ORTHO05D009675 6.2e-19 98.2 93 49.5
AT1G79200 Arabidopsis thaliana HOM05D007695 ORTHO05D009675 8.1e-19 97.8 89 53.9
Hund12430 Selenicereus undatus HOM05D007695 ORTHO05D009675 8.1e-19 97.8 66 69.7
PSO339G5408 Papaver somniferum HOM05D007695 ORTHO05D009675 1.1e-18 97.4 83 55.4
PSO384G4287 Papaver somniferum HOM05D007695 ORTHO05D009675 3.1e-18 95.9 79 55.7
SEGI_05035 Sequoiadendron giganteum HOM05D007695 ORTHO05D009675 2.0e-17 93.2 94 51.1
unitig_748.g7621 Utricularia gibba HOM05D000001 ORTHO05D000003 4.9e-16 88.6 79 55.7
Ah.16g106010 Amaranthus hybridus HOM05D007695 ORTHO05D009675 2.4e-15 86.3 60 63.3
Pp3c22_2020 Physcomitrium patens HOM05D007695 ORTHO05D009675 9.3e-15 84.3 72 55.6
Mapoly0004s0265 Marchantia polymorpha HOM05D007695 ORTHO05D009675 3.0e-13 79.3 107 42.1
Peaxi162Scf00225g00095 Petunia axillaris HOM05D007695 ORTHO05D009675 1.5e-12 77.0 53 67.9
CBR_g3127 Chara braunii HOM05D000017 ORTHO05D000013 1.9e-12 76.6 80 51.2
SMO145G0213 Selaginella moellendorffii HOM05D007695 ORTHO05D009675 4.5e-09 65.5 92 38.0
Cre06.g255250 Chlamydomonas reinhardtii HOM05D007695 ORTHO05D009675 4.9e-08 62.0 80 37.5


User provided reference genes

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