Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G2758 Erigeron canadensis HOM05D004855 ORTHO05D005656 2.3e-54 215.3 107 100.0
Lsat_1_v5_gn_8_77441 Lactuca sativa HOM05D004855 ORTHO05D005656 3.5e-39 164.9 107 75.7
Actinidia31268 Actinidia chinensis HOM05D004855 ORTHO05D005656 1.7e-33 146.0 107 65.4
Dinv21197 Davidia involucrata HOM05D004855 ORTHO05D005656 8.4e-33 143.7 108 64.8
TWI77G0302 Tripterygium wilfordii HOM05D004855 ORTHO05D005656 1.1e-32 143.3 108 63.9
CAN.G397.61 Capsicum annuum HOM05D004855 ORTHO05D005656 1.9e-32 142.5 107 62.6
Sc20g0006340 Simmondsia chinensis HOM05D004855 ORTHO05D005656 3.2e-32 141.7 107 61.7
PGSC0003DMG400008876 Solanum tuberosum HOM05D004855 ORTHO05D005656 3.2e-32 141.7 107 62.6
Nitab4.5_0000692g0080 Nicotiana tabacum HOM05D004855 ORTHO05D005656 1.2e-31 139.8 107 59.8
GSVIVG01033859001 Vitis vinifera HOM05D004855 ORTHO05D005656 1.2e-31 139.8 108 62.0
Sopen09g004650 Solanum pennellii HOM05D004855 ORTHO05D005656 1.6e-31 139.4 107 60.7
CSS0028852 Camellia sinensis var. sinensis HOM05D004855 ORTHO05D005656 2.1e-31 139.0 107 61.7
Peaxi162Scf00404g00216 Petunia axillaris HOM05D004855 ORTHO05D005656 2.1e-31 139.0 107 59.8
Migut.J01024 Erythranthe guttata HOM05D004855 ORTHO05D005656 2.7e-31 138.7 108 62.0
Oeu047859.1 Olea europaea HOM05D004855 ORTHO05D005656 2.7e-31 138.7 108 62.0
TWI74G1617 Tripterygium wilfordii HOM05D004855 ORTHO05D005656 2.7e-31 138.7 108 62.0
Atru.chr8.1484 Acer truncatum HOM05D004855 ORTHO05D005656 4.6e-31 137.9 108 62.0
PGR142G1385 Punica granatum HOM05D004855 ORTHO05D005656 4.6e-31 137.9 107 58.9
Ciclev10013171m.g Citrus clementina HOM05D004855 ORTHO05D005656 6.0e-31 137.5 108 59.3
Duzib106G1994 Durio zibethinus HOM05D004855 ORTHO05D005656 1.0e-30 136.7 107 57.0
Haze_19625 Corylus avellana HOM05D004855 ORTHO05D005656 1.3e-30 136.3 107 57.9
Cfa016620 Carpinus fangiana HOM05D004855 ORTHO05D005656 1.7e-30 136.0 107 57.0
CiPaw.09G015100 Carya illinoinensis HOM05D004855 ORTHO05D005656 1.7e-30 136.0 107 56.1
Gohir.A11G319200 Gossypium hirsutum HOM05D004855 ORTHO05D005656 1.7e-30 136.0 107 57.0
Gohir.D11G338500 Gossypium hirsutum HOM05D004855 ORTHO05D005656 1.7e-30 136.0 107 57.0
Gorai.007G368300 Gossypium raimondii HOM05D004855 ORTHO05D005656 1.7e-30 136.0 107 57.0
MSTRG.5853 Avicennia marina HOM05D004855 ORTHO05D005656 2.3e-30 135.6 108 60.2
Cc06_g05940 Coffea canephora HOM05D004855 ORTHO05D005656 2.3e-30 135.6 108 59.3
SalBow3G4427 Salvia bowleyana HOM05D004855 ORTHO05D005656 2.3e-30 135.6 107 57.0
Thecc.05G090600 Theobroma cacao HOM05D004855 ORTHO05D005656 2.3e-30 135.6 107 57.0
THA.LOC104804847 Tarenaya hassleriana HOM05D004855 ORTHO05D005656 3.0e-30 135.2 107 54.2
arahy.Tifrunner.gnm1.ann1.DCW42B Arachis hypogaea HOM05D004855 ORTHO05D005656 5.1e-30 134.4 108 60.2
AL7G35690 Arabidopsis lyrata HOM05D004855 ORTHO05D005656 6.6e-30 134.0 107 54.2
AT4G18590 Arabidopsis thaliana HOM05D004855 ORTHO05D005656 6.6e-30 134.0 107 54.2
MELO3C009479.2 Cucumis melo HOM05D004855 ORTHO05D005656 6.6e-30 134.0 107 57.0
Migut.L01788 Erythranthe guttata HOM05D004855 ORTHO05D005656 6.6e-30 134.0 108 59.3
Lj1g0021036 Lotus japonicus HOM05D004855 ORTHO05D005656 6.6e-30 134.0 108 59.3
Prupe.7G108800 Prunus persica HOM05D004855 ORTHO05D005656 6.6e-30 134.0 107 58.9
TAR633G0291 Trochodendron aralioides HOM05D004855 ORTHO05D005656 1.1e-29 133.3 108 54.6
CANSAT64G1995 Cannabis sativa HOM05D004855 ORTHO05D005656 1.5e-29 132.9 107 54.2
AUR62030671 Chenopodium quinoa HOM05D004855 ORTHO05D005656 1.5e-29 132.9 108 54.6
Sopen10g031710 Solanum pennellii HOM05D004855 ORTHO05D005656 1.5e-29 132.9 108 57.4
Aa31LG6G1320 Aethionema arabicum HOM05D004855 ORTHO05D005656 1.9e-29 132.5 107 52.3
MD14G1024000 Malus domestica HOM05D004855 ORTHO05D005656 1.9e-29 132.5 107 58.9
Ah.10g026130 Amaranthus hybridus HOM05D004855 ORTHO05D005656 2.5e-29 132.1 108 54.6
Potri.006G211900 Populus trichocarpa HOM05D004855 ORTHO05D005656 2.5e-29 132.1 108 59.3
Potri.006G212100 Populus trichocarpa HOM05D004855 ORTHO05D005656 2.5e-29 132.1 108 59.3
Carub.0007s2265 Capsella rubella HOM05D004855 ORTHO05D005656 3.3e-29 131.7 107 54.2
RcHm_v2.0_Chr3g0473901 Rosa chinensis HOM05D004855 ORTHO05D005656 3.3e-29 131.7 107 59.8
Eucgr.K02028 Eucalyptus grandis HOM05D004855 ORTHO05D005656 7.3e-29 130.6 107 56.1
BcaC09g51486 Brassica carinata HOM05D004855 ORTHO05D005656 9.6e-29 130.2 107 51.4
BraA01t01006Z Brassica rapa HOM05D004855 ORTHO05D005656 9.6e-29 130.2 107 51.4
FvH4_6g18910 Fragaria vesca HOM05D004855 ORTHO05D005656 9.6e-29 130.2 107 59.8
Thhalv10026639m.g Eutrema salsugineum HOM05D004855 ORTHO05D005656 1.3e-28 129.8 107 51.4
Glyma.03G196800 Glycine max HOM05D004855 ORTHO05D005656 1.3e-28 129.8 109 57.8
Phvul.001G191000 Phaseolus vulgaris HOM05D004855 ORTHO05D005656 1.3e-28 129.8 107 57.0
THA.LOC104805250 Tarenaya hassleriana HOM05D004855 ORTHO05D005656 1.3e-28 129.8 107 51.4
AT3G52630 Arabidopsis thaliana HOM05D004855 ORTHO05D005656 1.6e-28 129.4 108 55.6
BcaNung03818 Brassica carinata HOM05D004855 ORTHO05D005656 1.6e-28 129.4 107 52.3
BcaNung06738 Brassica carinata HOM05D004855 ORTHO05D005656 1.6e-28 129.4 107 52.3
CsaV3_3G037350 Cucumis sativus L. HOM05D004855 ORTHO05D005656 1.6e-28 129.4 107 57.0
SGA_v2.0_scaffold31G12906 Striga asiatica HOM05D004855 ORTHO05D005656 1.6e-28 129.4 104 56.7
AL5G33410 Arabidopsis lyrata HOM05D004855 ORTHO05D005656 2.1e-28 129.0 108 52.8
CARHR162450 Cardamine hirsuta HOM05D004855 ORTHO05D005656 2.1e-28 129.0 108 51.9
FAN05G0016 Fragaria x ananassa HOM05D004855 ORTHO05D005656 2.8e-28 128.6 107 59.8
Manes.09G054300 Manihot esculenta HOM05D004855 ORTHO05D005656 3.6e-28 128.3 108 59.3
CAN.G128.111 Capsicum annuum HOM05D004855 ORTHO05D005656 4.8e-28 127.9 108 58.3
Lalb_Chr25g0288301 Lupinus albus HOM05D004855 ORTHO05D005656 6.2e-28 127.5 108 56.5
Carub.0005s1905 Capsella rubella HOM05D004855 ORTHO05D005656 8.1e-28 127.1 108 51.9
PSO339G3393 Papaver somniferum HOM05D004855 ORTHO05D005656 8.1e-28 127.1 107 54.2
PSO384G0979 Papaver somniferum HOM05D004855 ORTHO05D005656 8.1e-28 127.1 107 55.1
FAN02G3816 Fragaria x ananassa HOM05D004855 ORTHO05D005656 1.4e-27 126.3 107 58.9
Medtr7g104870 Medicago truncatula HOM05D004855 ORTHO05D005656 1.4e-27 126.3 107 55.1
ClCG10G018900 Citrullus lanatus HOM05D004855 ORTHO05D005656 1.8e-27 125.9 107 57.0
Nn6g34881 Nelumbo nucifera HOM05D004855 ORTHO05D005656 1.8e-27 125.9 108 58.3
Aqoxy4G02764 Aquilegia oxysepala HOM05D004855 ORTHO05D005656 4.0e-27 124.8 108 55.6
Sed0021085 Sechium edule HOM05D004855 ORTHO05D005656 4.0e-27 124.8 107 55.1
CANSAT78G0615 Cannabis sativa HOM05D004855 ORTHO05D005656 5.3e-27 124.4 107 54.2
VMungo1383G3261 Vigna mungo HOM05D004855 ORTHO05D005656 5.3e-27 124.4 106 54.7
Sp5g09660 Schrenkiella parvula HOM05D004855 ORTHO05D005656 9.0e-27 123.6 107 51.4
Thhalv10010848m.g Eutrema salsugineum HOM05D004855 ORTHO05D005656 1.5e-26 122.9 107 50.5
TPR.G23346 Trifolium pratense HOM05D004855 ORTHO05D005656 1.5e-26 122.9 108 54.6
Dinv10926 Davidia involucrata HOM05D004855 ORTHO05D005656 2.0e-26 122.5 108 51.9
BcaB02g07823 Brassica carinata HOM05D004855 ORTHO05D005656 3.4e-26 121.7 109 50.5
GSVIVG01000981001 Vitis vinifera HOM05D004855 ORTHO05D005656 4.5e-26 121.3 108 51.9
CDE08G1222 Ceratophyllum demersum HOM05D004855 ORTHO05D005656 7.6e-26 120.6 107 51.4
ATR0706G105 Amborella trichopoda HOM05D004855 ORTHO05D005656 1.7e-25 119.4 107 54.2
Ca_09013_v3 Cicer arietinum L. HOM05D004855 ORTHO05D005656 2.2e-25 119.0 108 53.7
Psat3g032240 Pisum sativum HOM05D004855 ORTHO05D005656 2.2e-25 119.0 111 55.9
CsaV3_5G035370 Cucumis sativus L. HOM05D004855 ORTHO05D005656 2.9e-25 118.6 107 51.4
MBI18_g09594_MAGBIO Magnolia biondii HOM05D004855 ORTHO05D005656 3.8e-25 118.2 107 49.5
MELO3C012349.2 Cucumis melo HOM05D004855 ORTHO05D005656 4.9e-25 117.9 107 51.4
Sed0005547 Sechium edule HOM05D004855 ORTHO05D005656 1.9e-24 115.9 107 49.5
Ca_25663_v3 Cicer arietinum L. HOM05D004855 ORTHO05D005656 3.2e-24 115.2 108 51.9
COL.COLO4_29712 Corchorus olitorius HOM05D004855 ORTHO05D005656 3.2e-24 115.2 85 60.0
SEGI_35741 Sequoiadendron giganteum HOM05D004855 ORTHO05D005656 3.2e-24 115.2 108 52.8
Rhsim02G0090500 Rhododendron simsii HOM05D004855 ORTHO05D005656 4.2e-24 114.8 87 63.2
Sp7g15440 Schrenkiella parvula HOM05D002603 ORTHO05D002907 4.2e-24 114.8 98 49.0
VMungo0720G0894 Vigna mungo HOM05D004855 ORTHO05D005656 4.2e-24 114.8 107 48.6
Lalb_Chr21g0309181 Lupinus albus HOM05D004855 ORTHO05D005656 7.1e-24 114.0 107 50.5
Nitab4.5_0003808g0090 Nicotiana tabacum HOM05D004855 ORTHO05D005656 9.3e-24 113.6 90 60.0
BolC1t01228H Brassica oleracea HOM05D002603 ORTHO05D002907 1.2e-23 113.2 95 49.5
Medtr1g112020 Medicago truncatula HOM05D004855 ORTHO05D005656 1.2e-23 113.2 108 50.0
Phvul.007G022600 Phaseolus vulgaris HOM05D004855 ORTHO05D005656 1.6e-23 112.8 107 48.6
Sabra10G0187300 Salix brachista HOM05D004855 ORTHO05D005656 1.6e-23 112.8 107 49.5
Nitab4.5_0000062g0480 Nicotiana tabacum HOM05D004855 ORTHO05D005656 2.7e-23 112.1 90 60.0
Os01g0253600 Oryza sativa ssp. japonica HOM05D004855 ORTHO05D005656 2.7e-23 112.1 107 49.5
Solyc10g081210.3 Solanum lycopersicum HOM05D004855 ORTHO05D005656 2.7e-23 112.1 89 57.3
QL04p046696 Quercus lobata HOM05D004855 ORTHO05D005656 4.6e-23 111.3 106 48.1
MD12G1025300 Malus domestica HOM05D004855 ORTHO05D005656 6.0e-23 110.9 103 52.4
vmacro07416 Vaccinium macrocarpon HOM05D004855 ORTHO05D005656 6.0e-23 110.9 85 62.4
Cfa021941 Carpinus fangiana HOM05D004855 ORTHO05D005656 1.0e-22 110.2 107 46.7
Potri.010G239200 Populus trichocarpa HOM05D004855 ORTHO05D005656 1.0e-22 110.2 107 47.7
RhsimUnG0050400 Rhododendron simsii HOM05D000314 ORTHO05D000189 1.0e-22 110.2 87 58.6
CiPaw.13G039700 Carya illinoinensis HOM05D004855 ORTHO05D005656 1.3e-22 109.8 109 53.2
Medtr1g112040 Medicago truncatula HOM05D004855 ORTHO05D005656 1.3e-22 109.8 108 49.1
Zm00001eb333640 Zea mays HOM05D004855 ORTHO05D005656 2.3e-22 109.0 107 47.7
Lj5g0001855 Lotus japonicus HOM05D004855 ORTHO05D005656 3.0e-22 108.6 107 47.7
QL07p038661 Quercus lobata HOM05D004855 ORTHO05D005656 3.9e-22 108.2 108 51.9
TPR.G20467 Trifolium pratense HOM05D004855 ORTHO05D005656 3.9e-22 108.2 108 48.1
Glyma.10G278800 Glycine max HOM05D004855 ORTHO05D005656 6.7e-22 107.5 107 46.7
TPR.G2466 Trifolium pratense HOM05D004855 ORTHO05D005656 1.1e-21 106.7 108 47.2
Rhsim03G0015500 Rhododendron simsii HOM05D004855 ORTHO05D005656 1.9e-21 105.9 85 58.8
CARHR225430 Cardamine hirsuta HOM05D004855 ORTHO05D005656 3.3e-21 105.1 86 50.0
Eucgr.K02554 Eucalyptus grandis HOM05D004855 ORTHO05D005656 3.3e-21 105.1 107 50.5
CSS0024102 Camellia sinensis var. sinensis HOM05D004855 ORTHO05D005656 7.4e-21 104.0 87 58.6
TPR.G762 Trifolium pratense HOM05D004855 ORTHO05D005656 7.4e-21 104.0 108 47.2
Cpa.g.sc5.8 Carica papaya HOM05D004855 ORTHO05D005656 1.6e-20 102.8 85 56.5
Duzib093G1614 Durio zibethinus HOM05D004855 ORTHO05D005656 2.1e-20 102.4 85 54.1
Zm00001eb127650 Zea mays HOM05D004855 ORTHO05D005656 2.1e-20 102.4 107 43.0
Glyma.20G111700 Glycine max HOM05D004855 ORTHO05D005656 2.8e-20 102.1 107 43.9
PGSC0003DMG400028113 Solanum tuberosum HOM05D004855 ORTHO05D005656 3.7e-20 101.7 85 56.5
CSS0041239 Camellia sinensis var. sinensis HOM05D004855 ORTHO05D005656 4.8e-20 101.3 87 57.5
Sabra06G0163300 Salix brachista HOM05D004855 ORTHO05D005656 1.1e-19 100.1 87 56.3
AagrBONN_evm.TU.Sc2ySwM_362.2757 Anthoceros agrestis HOM05D004855 ORTHO05D005656 5.3e-19 97.8 100 48.0
A01p10600 Brassica napus HOM05D002603 ORTHO05D002907 1.2e-18 96.7 85 48.2
C01p12540 Brassica napus HOM05D002603 ORTHO05D002907 1.2e-18 96.7 85 48.2
Hund19922 Selenicereus undatus HOM05D004855 ORTHO05D005656 1.2e-18 96.7 89 51.7
AagrBONN_evm.TU.Sc2ySwM_117.343 Anthoceros agrestis HOM05D004855 ORTHO05D005656 1.5e-18 96.3 101 48.5
Mapoly0013s0016 Marchantia polymorpha HOM05D004855 ORTHO05D005656 1.5e-18 96.3 106 44.3
EL10Ac2g02589 Beta vulgaris HOM05D004855 ORTHO05D005656 3.4e-18 95.1 86 47.7
unitig_749.g14301 Utricularia gibba HOM05D004855 ORTHO05D005656 9.9e-18 93.6 72 52.8
Pp3c2_28010 Physcomitrium patens HOM05D004855 ORTHO05D005656 2.9e-17 92.0 109 45.9
ClCG05G021800 Citrullus lanatus HOM05D004855 ORTHO05D005656 4.9e-17 91.3 85 51.8
Peaxi162Scf00153g00093 Petunia axillaris HOM05D004855 ORTHO05D005656 6.4e-17 90.9 65 66.2
HPP92_016958 Vanilla planifolia HOM05D004855 ORTHO05D005656 1.1e-16 90.1 87 52.9
Manes.10G061800 Manihot esculenta HOM05D004855 ORTHO05D005656 2.4e-16 89.0 85 45.9
Zm00001eb121860 Zea mays HOM05D003776 ORTHO05D005656 1.6e-15 86.3 85 48.2
Psat3g176360 Pisum sativum HOM05D004855 ORTHO05D005656 1.0e-14 83.6 87 51.7
Sed0001253 Sechium edule HOM05D004855 ORTHO05D005656 3.9e-14 81.6 85 51.8
Peaxi162Scf00153g00101 Petunia axillaris HOM05D004855 ORTHO05D005656 8.7e-14 80.5 65 61.5
SHI23843 Sapria himalayana HOM05D004855 ORTHO05D005656 1.1e-13 80.1 84 47.6
CBR_g41290 Chara braunii HOM05D004855 ORTHO05D005656 3.7e-12 75.1 110 40.0
arahy.Tifrunner.gnm1.ann1.NID4K0 Arachis hypogaea HOM05D004855 ORTHO05D005656 6.2e-12 74.3 58 63.8
FvH4_2g12760 Fragaria vesca HOM05D004855 ORTHO05D005656 4.9e-09 64.7 73 46.6
PRCOL_00005602 Prasinoderma coloniale HOM05D004855 ORTHO05D005656 2.7e-07 58.9 109 33.9
Zm00001eb007300 Zea mays HOM05D004855 ORTHO05D005656 7.9e-07 57.4 64 42.2
Zm00001eb198520 Zea mays HOM05D012833 ORTHO05D005656 7.9e-07 57.4 64 42.2


User provided reference genes

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