Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G2753 Erigeron canadensis HOM05D000461 ORTHO05D009768 1.2e-269 932.6 466 100.0
Lsat_1_v5_gn_7_106360 Lactuca sativa HOM05D000461 ORTHO05D009768 9.4e-230 800.0 438 91.6
HanXRQChr11g0330921 Helianthus annuus HOM05D000461 ORTHO05D009768 2.1e-229 798.9 452 87.8
Hma1.2p1_1003F.1_g246700 Hydrangea macrophylla HOM05D000461 ORTHO05D009768 4.5e-216 754.6 455 81.8
Dinv08334 Davidia involucrata HOM05D000461 ORTHO05D009768 1.3e-215 753.1 454 83.0
TAR626G0736 Trochodendron aralioides HOM05D000461 ORTHO05D009768 5.0e-215 751.1 431 84.7
MD03G1220100 Malus domestica HOM05D000461 ORTHO05D009768 3.2e-214 748.4 424 84.7
Prupe.4G188800 Prunus persica HOM05D000461 ORTHO05D009768 1.6e-213 746.1 424 84.9
QL93p2023_0115 Quercus lobata HOM05D000461 ORTHO05D009768 3.0e-212 741.9 407 88.5
Migut.M00870 Erythranthe guttata HOM05D000461 ORTHO05D009768 2.6e-211 738.8 449 81.7
RcHm_v2.0_Chr5g0035161 Rosa chinensis HOM05D000461 ORTHO05D009768 2.6e-211 738.8 425 83.8
Lj3g0022224 Lotus japonicus HOM05D000461 ORTHO05D009768 4.4e-211 738.0 443 81.9
Nn1g03933 Nelumbo nucifera HOM05D000461 ORTHO05D009768 1.7e-210 736.1 417 84.4
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 2.2e-210 735.7 422 85.3
Lalb_Chr19g0134451 Lupinus albus HOM05D000461 ORTHO05D009768 3.7e-210 734.9 431 83.3
SGA_v2.0_scaffold34G13718 Striga asiatica HOM05D000461 ORTHO05D009768 4.8e-210 734.6 466 78.5
Cc05_g12580 Coffea canephora HOM05D000461 ORTHO05D009768 6.3e-210 734.2 433 83.6
Rhsim04G0018400 Rhododendron simsii HOM05D000461 ORTHO05D009768 8.3e-210 733.8 448 80.4
Potri.011G127400 Populus trichocarpa HOM05D000461 ORTHO05D009768 2.4e-209 732.3 428 83.6
MSTRG.6849 Avicennia marina HOM05D000461 ORTHO05D009768 3.5e-208 728.4 442 82.6
FvH4_3g20850 Fragaria vesca HOM05D000461 ORTHO05D009768 7.7e-208 727.2 425 83.1
arahy.Tifrunner.gnm1.ann1.58XN2N Arachis hypogaea HOM05D000461 ORTHO05D009768 1.3e-207 726.5 471 77.7
Gorai.002G075600 Gossypium raimondii HOM05D000461 ORTHO05D009768 1.3e-207 726.5 439 81.8
arahy.Tifrunner.gnm1.ann1.QNW6LA Arachis hypogaea HOM05D000461 ORTHO05D009768 2.9e-207 725.3 471 77.5
PGSC0003DMG400019289 Solanum tuberosum HOM05D000461 ORTHO05D009768 5.0e-207 724.5 435 81.6
Solyc07g063510.3 Solanum lycopersicum HOM05D000461 ORTHO05D009768 6.5e-207 724.2 432 81.7
Peaxi162Scf01111g00017 Petunia axillaris HOM05D000461 ORTHO05D009768 8.5e-207 723.8 424 82.8
Sopen07g031690 Solanum pennellii HOM05D000461 ORTHO05D009768 8.5e-207 723.8 442 80.8
Glyma.12G147900 Glycine max HOM05D000461 ORTHO05D009768 1.5e-206 723.0 446 80.3
Cpa.g.sc80.105 Carica papaya HOM05D000461 ORTHO05D009768 1.9e-206 722.6 405 86.9
Gohir.D01G055500 Gossypium hirsutum HOM05D000461 ORTHO05D009768 1.9e-206 722.6 439 81.1
VMungo1127G1042 Vigna mungo HOM05D000461 ORTHO05D009768 7.2e-206 720.7 432 81.2
Manes.03G115700 Manihot esculenta HOM05D000461 ORTHO05D009768 1.2e-205 719.9 431 82.4
Nitab4.5_0002565g0060 Nicotiana tabacum HOM05D000461 ORTHO05D009768 1.2e-205 719.9 422 82.7
Phvul.011G154500 Phaseolus vulgaris HOM05D000461 ORTHO05D009768 1.6e-205 719.5 408 85.5
Eucgr.H00422 Eucalyptus grandis HOM05D000461 ORTHO05D009768 2.1e-205 719.2 432 82.4
CsaV3_3G044400 Cucumis sativus L. HOM05D000461 ORTHO05D009768 2.7e-205 718.8 448 79.5
QL08p018730 Quercus lobata HOM05D000461 ORTHO05D009768 2.7e-205 718.8 456 78.9
TWI39G0712 Tripterygium wilfordii HOM05D000461 ORTHO05D009768 2.7e-205 718.8 408 84.1
Medtr8g093250 Medicago truncatula HOM05D000461 ORTHO05D009768 6.1e-205 717.6 446 81.2
Atru.chr2.2833 Acer truncatum HOM05D000461 ORTHO05D009768 8.0e-205 717.2 404 85.6
Sed0023337 Sechium edule HOM05D000461 ORTHO05D009768 8.0e-205 717.2 432 81.2
Ah.04g164990 Amaranthus hybridus HOM05D000461 ORTHO05D009768 1.0e-204 716.8 420 83.1
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 1.0e-204 716.8 413 84.3
TPR.G37406 Trifolium pratense HOM05D000461 ORTHO05D009768 1.4e-204 716.5 435 82.3
CAN.G162.98 Capsicum annuum HOM05D000461 ORTHO05D009768 2.3e-204 715.7 415 84.1
vmacro09551 Vaccinium macrocarpon HOM05D000461 ORTHO05D009768 2.3e-204 715.7 455 78.2
MBI02_g10553_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009768 2.6e-203 712.2 443 78.8
Sc03g0009640 Simmondsia chinensis HOM05D000461 ORTHO05D009768 1.7e-202 709.5 453 77.5
Ca_17659_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009768 5.4e-201 704.5 431 81.4
CANSAT11G0348 Cannabis sativa HOM05D000461 ORTHO05D009768 3.8e-199 698.4 486 73.7
HPP92_016586 Vanilla planifolia HOM05D000461 ORTHO05D009768 2.5e-198 695.7 425 79.3
AUR62015610 Chenopodium quinoa HOM05D000461 ORTHO05D009768 4.2e-198 694.9 467 75.6
SalBow8G3533 Salvia bowleyana HOM05D000461 ORTHO05D009768 1.2e-197 693.3 387 86.0
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 1.4e-196 689.9 430 80.7
Lj1C852T3 Lonicera japonica HOM05D000461 ORTHO05D009768 5.7e-195 684.5 426 81.0
Haze_09517 Corylus avellana HOM05D000461 ORTHO05D009768 3.7e-194 681.8 421 80.5
Duzib213G0388 Durio zibethinus HOM05D000461 ORTHO05D009768 5.4e-193 677.9 397 82.4
SEGI_18811 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 6.6e-191 671.0 416 76.9
CiPaw.11G175300 Carya illinoinensis HOM05D000461 ORTHO05D009768 8.6e-191 670.6 366 88.3
EL10Ac4g08080 Beta vulgaris HOM05D000461 ORTHO05D009768 3.3e-190 668.7 412 80.3
Thecc.07G073000 Theobroma cacao HOM05D000461 ORTHO05D009768 6.1e-189 664.5 445 75.7
unitig_747.g21565 Utricularia gibba HOM05D000461 ORTHO05D009768 2.0e-187 659.4 426 76.8
AUR62029323 Chenopodium quinoa HOM05D000461 ORTHO05D009768 2.9e-186 655.6 442 75.1
Zm00001eb069190 Zea mays HOM05D000461 ORTHO05D009768 2.0e-184 649.4 408 76.7
Nitab4.5_0000297g0070 Nicotiana tabacum HOM05D000461 ORTHO05D009768 4.6e-184 648.3 421 77.7
ClCG11G018420 Citrullus lanatus HOM05D000461 ORTHO05D009768 1.0e-183 647.1 432 75.5
Mapoly0032s0012 Marchantia polymorpha HOM05D000461 ORTHO05D009768 6.8e-180 634.4 412 73.3
Hund27427 Selenicereus undatus HOM05D000461 ORTHO05D009768 6.8e-180 634.4 442 72.6
Pp3c15_6180 Physcomitrium patens HOM05D000461 ORTHO05D009768 1.9e-177 626.3 411 72.0
MELO3C018201.2 Cucumis melo HOM05D000461 ORTHO05D009768 3.3e-174 615.5 454 70.7
AagrBONN_evm.TU.Sc2ySwM_344.1693 Anthoceros agrestis HOM05D000461 ORTHO05D009768 1.7e-167 593.2 469 62.7
SMO137G0173 Selaginella moellendorffii HOM05D000461 ORTHO05D009768 1.5e-163 580.1 407 69.3
CBR_g31136 Chara braunii HOM05D000461 ORTHO05D009768 2.1e-160 569.7 413 66.3
Oeu019359.1 Olea europaea HOM05D000461 ORTHO05D009768 6.2e-157 558.1 318 85.5
CDE12G0333 Ceratophyllum demersum HOM05D000461 ORTHO05D009768 9.0e-156 554.3 362 74.3
Psat7g047120 Pisum sativum HOM05D000461 ORTHO05D009768 1.2e-152 543.9 357 76.8
Cre06.g301650 Chlamydomonas reinhardtii HOM05D000461 ORTHO05D009768 1.4e-132 477.2 417 56.8
PRCOL_00003908 Prasinoderma coloniale HOM05D000461 ORTHO05D009768 4.8e-125 452.2 395 58.2
GSVIVG01014420001 Vitis vinifera HOM05D000461 ORTHO05D009768 5.1e-111 405.6 228 85.1
Glyma.06G253602 Glycine max HOM05D000461 ORTHO05D009768 2.4e-100 370.2 243 74.9
Gohir.A01G068201 Gossypium hirsutum HOM05D000461 ORTHO05D009768 1.3e-82 311.2 222 73.4
Zm00001eb291490 Zea mays HOM05D000461 ORTHO05D009768 4.1e-76 289.7 183 75.4
Zm00001eb057620 Zea mays HOM05D000461 ORTHO05D009768 1.2e-75 288.1 183 74.9
Zm00001eb222780 Zea mays HOM05D000461 ORTHO05D009768 1.2e-75 288.1 183 74.9
Zm00001eb308580 Zea mays HOM05D000461 ORTHO05D009768 1.2e-75 288.1 183 74.9
ATR0274G001 Amborella trichopoda HOM05D000461 ORTHO05D009768 2.5e-65 253.8 146 83.6
Gohir.A01G068251 Gossypium hirsutum HOM05D000461 ORTHO05D009768 5.6e-65 252.7 140 86.4
SEGI_34047 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 6.6e-58 229.2 261 48.7
Os04g0636300 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009768 5.2e-47 193.0 140 68.6
GSVIVG01014419001 Vitis vinifera HOM05D000461 ORTHO05D009768 1.1e-36 158.7 101 81.2
arahy.Tifrunner.gnm1.ann1.AV15VC Arachis hypogaea HOM05D000296 ORTHO05D000175 2.2e-13 81.3 44 88.6
Lalb_Chr19g0134431 Lupinus albus HOM05D000461 ORTHO05D038317 5.1e-10 70.1 65 60.0
ATR0693G093 Amborella trichopoda HOM05D000461 ORTHO05D038317 1.1e-09 68.9 59 61.0
SEGI_16587 Sequoiadendron giganteum HOM05D000415 ORTHO05D385778 1.8e-07 61.6 47 55.3
Nn1g06725 Nelumbo nucifera HOM05D000461 ORTHO05D009768 4.5e-06 57.0 43 67.4


User provided reference genes

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