Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G2742 Erigeron canadensis HOM05D000084 ORTHO05D000363 2.2e-44 181.8 86 100.0
ECA233G1274 Erigeron canadensis HOM05D000084 ORTHO05D000363 7.2e-27 123.6 61 96.7
HanXRQChr11g0328501 Helianthus annuus HOM05D000084 ORTHO05D000363 2.5e-19 98.6 61 80.3
Hma1.2p1_0531F.1_g173330 Hydrangea macrophylla HOM05D000084 ORTHO05D000363 1.6e-18 95.9 61 77.0
Dinv04304 Davidia involucrata HOM05D000084 ORTHO05D000363 2.1e-18 95.5 61 73.8
Lsat_1_v5_gn_7_104181 Lactuca sativa HOM05D000084 ORTHO05D000363 2.1e-18 95.5 61 77.0
Ciclev10007617m.g Citrus clementina HOM05D000084 ORTHO05D000363 5.7e-16 87.4 61 67.2
Lj8A156T79 Lonicera japonica HOM05D000084 ORTHO05D000363 5.7e-16 87.4 61 70.5
QL08p021867 Quercus lobata HOM05D000084 ORTHO05D000363 7.5e-16 87.0 61 67.2
Dinv20173 Davidia involucrata HOM05D000084 ORTHO05D000363 9.8e-16 86.7 61 70.5
CSS0005304 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D000363 2.2e-15 85.5 61 65.6
Rhsim06G0199200 Rhododendron simsii HOM05D000084 ORTHO05D000363 2.8e-15 85.1 61 68.9
Sabra11G0103900 Salix brachista HOM05D000684 ORTHO05D000688 3.7e-15 84.7 61 68.9
Nitab4.5_0001336g0030 Nicotiana tabacum HOM05D000084 ORTHO05D000363 1.1e-14 83.2 62 67.7
PGSC0003DMG400012447 Solanum tuberosum HOM05D000084 ORTHO05D000363 1.1e-14 83.2 62 67.7
Nitab4.5_0001241g0020 Nicotiana tabacum HOM05D000084 ORTHO05D000363 1.4e-14 82.8 62 67.7
Potri.001G399700 Populus trichocarpa HOM05D000084 ORTHO05D000363 2.4e-14 82.0 61 65.6
Potri.011G119400 Populus trichocarpa HOM05D000084 ORTHO05D000363 3.1e-14 81.6 61 65.6
Solyc07g063130.4 Solanum lycopersicum HOM05D000084 ORTHO05D000363 3.1e-14 81.6 62 66.1
Sopen07g031320 Solanum pennellii HOM05D000084 ORTHO05D000363 3.1e-14 81.6 62 66.1
TWI38G0368 Tripterygium wilfordii HOM05D000084 ORTHO05D000363 3.1e-14 81.6 61 65.6
CANSAT56G1650 Cannabis sativa HOM05D000084 ORTHO05D000363 5.4e-14 80.9 61 60.7
RcHm_v2.0_Chr5g0033611 Rosa chinensis HOM05D000084 ORTHO05D000363 5.4e-14 80.9 61 65.6
Peaxi162Scf00069g00143 Petunia axillaris HOM05D000084 ORTHO05D000363 7.0e-14 80.5 61 60.7
Cfa020584 Carpinus fangiana HOM05D000084 ORTHO05D000363 1.2e-13 79.7 61 63.9
Haze_09428 Corylus avellana HOM05D000084 ORTHO05D000363 1.2e-13 79.7 61 63.9
FvH4_3g19930 Fragaria vesca HOM05D000084 ORTHO05D000363 1.2e-13 79.7 61 65.6
FAN11G0262 Fragaria x ananassa HOM05D000084 ORTHO05D000363 1.2e-13 79.7 61 65.6
FAN21G0490 Fragaria x ananassa HOM05D000084 ORTHO05D000363 1.2e-13 79.7 61 65.6
CsaV3_3G019430 Cucumis sativus L. HOM05D000084 ORTHO05D000363 1.6e-13 79.3 61 65.6
FAN25G1819 Fragaria x ananassa HOM05D000084 ORTHO05D000363 1.6e-13 79.3 61 65.6
Thecc.07G089700 Theobroma cacao HOM05D000084 ORTHO05D000363 1.6e-13 79.3 61 62.3
CAN.G162.58 Capsicum annuum HOM05D000084 ORTHO05D000363 2.0e-13 79.0 61 67.2
MELO3C019411.2 Cucumis melo HOM05D000084 ORTHO05D000363 2.0e-13 79.0 60 66.7
Atru.chr2.2606 Acer truncatum HOM05D000084 ORTHO05D000363 2.7e-13 78.6 61 63.9
GSVIVG01014335001 Vitis vinifera HOM05D000084 ORTHO05D000363 2.7e-13 78.6 60 65.0
COL.COLO4_27173 Corchorus olitorius HOM05D000084 ORTHO05D000363 3.5e-13 78.2 61 62.3
TAR629G0967 Trochodendron aralioides HOM05D000084 ORTHO05D000363 3.5e-13 78.2 60 65.0
FAN16G3097 Fragaria x ananassa HOM05D000084 ORTHO05D000363 4.5e-13 77.8 61 63.9
vmacro11866 Vaccinium macrocarpon HOM05D000084 ORTHO05D000363 4.5e-13 77.8 61 65.6
ClCG05G009340 Citrullus lanatus HOM05D000084 ORTHO05D000363 5.9e-13 77.4 61 63.9
Actinidia09687 Actinidia chinensis HOM05D000084 ORTHO05D000363 1.0e-12 76.6 61 62.3
MD03G1227900 Malus domestica HOM05D000084 ORTHO05D000363 1.0e-12 76.6 61 63.9
Sabra16G0262200 Salix brachista HOM05D000084 ORTHO05D000363 1.0e-12 76.6 62 61.3
Duzib170G0128 Durio zibethinus HOM05D000084 ORTHO05D000363 1.7e-12 75.9 61 60.7
Prupe.4G181100 Prunus persica HOM05D000084 ORTHO05D000363 1.7e-12 75.9 61 60.7
Glyma.12G224500 Glycine max HOM05D000084 ORTHO05D000363 2.3e-12 75.5 61 60.7
Nn1g06529 Nelumbo nucifera HOM05D000084 ORTHO05D000363 2.9e-12 75.1 60 61.7
Duzib213G0126 Durio zibethinus HOM05D000084 ORTHO05D000363 3.8e-12 74.7 61 57.4
Manes.03G110000 Manihot esculenta HOM05D000084 ORTHO05D000363 3.8e-12 74.7 61 62.3
CiPaw.12G118400 Carya illinoinensis HOM05D000084 ORTHO05D000363 8.6e-12 73.6 61 60.7
Nn1g04101 Nelumbo nucifera HOM05D000084 ORTHO05D000363 8.6e-12 73.6 60 60.0
Sed0023762 Sechium edule HOM05D000084 ORTHO05D000363 1.1e-11 73.2 61 59.0
CiPaw.11G169800 Carya illinoinensis HOM05D000084 ORTHO05D000363 1.9e-11 72.4 83 50.6
Aqoxy1G02407 Aquilegia oxysepala HOM05D000084 ORTHO05D000363 2.5e-11 72.0 61 60.7
Glyma.13G276800 Glycine max HOM05D000084 ORTHO05D000363 2.5e-11 72.0 64 60.9
MD11G1247100 Malus domestica HOM05D000084 ORTHO05D000363 5.5e-11 70.9 59 62.7
Sabra02G0085200 Salix brachista HOM05D000084 ORTHO05D000363 5.5e-11 70.9 61 62.3
AL1G61410 Arabidopsis lyrata HOM05D000084 ORTHO05D000363 7.2e-11 70.5 52 67.3
Actinidia11079 Actinidia chinensis HOM05D000084 ORTHO05D000363 9.5e-11 70.1 74 51.4
Gohir.A08G021108 Gossypium hirsutum HOM05D000084 ORTHO05D000363 9.5e-11 70.1 72 52.8
TPR.G38965 Trifolium pratense HOM05D000084 ORTHO05D000363 9.5e-11 70.1 54 63.0
TWI39G1271 Tripterygium wilfordii HOM05D000084 ORTHO05D000363 9.5e-11 70.1 61 59.0
Phvul.005G071900 Phaseolus vulgaris HOM05D000084 ORTHO05D000363 1.2e-10 69.7 61 57.4
VMungo1080G1661 Vigna mungo HOM05D000084 ORTHO05D000363 1.2e-10 69.7 61 57.4
arahy.Tifrunner.gnm1.ann1.PT90BW Arachis hypogaea HOM05D000084 ORTHO05D000363 1.6e-10 69.3 61 59.0
CSS0027805 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D000363 1.6e-10 69.3 57 63.2
Medtr2g085200 Medicago truncatula HOM05D000084 ORTHO05D000363 2.1e-10 68.9 60 55.0
AT1G53050 Arabidopsis thaliana HOM05D000084 ORTHO05D000363 2.8e-10 68.6 52 65.4
DCAR_013107 Daucus carota HOM05D000084 ORTHO05D000363 3.6e-10 68.2 61 60.7
Sc03g0010060 Simmondsia chinensis HOM05D000084 ORTHO05D000363 4.7e-10 67.8 71 54.9
arahy.Tifrunner.gnm1.ann1.EPLV3S Arachis hypogaea HOM05D000084 ORTHO05D000363 6.1e-10 67.4 61 57.4
Hma1.2p1_0002F.1_g001950 Hydrangea macrophylla HOM05D000084 ORTHO05D000363 6.1e-10 67.4 54 61.1
Carub.0001s4221 Capsella rubella HOM05D000084 ORTHO05D000363 8.0e-10 67.0 52 63.5
THA.LOC104810471 Tarenaya hassleriana HOM05D000084 ORTHO05D000363 8.0e-10 67.0 52 67.3
Manes.15G087101 Manihot esculenta HOM05D000084 ORTHO05D000363 1.0e-09 66.6 61 55.7
PGR083G1446 Punica granatum HOM05D000084 ORTHO05D000363 1.0e-09 66.6 62 61.3
Actinidia11026 Actinidia chinensis HOM05D000084 ORTHO05D000363 1.4e-09 66.2 62 58.1
Lalb_Chr25g0286361 Lupinus albus HOM05D000084 ORTHO05D000363 1.4e-09 66.2 61 59.0
MSTRG.12908 Avicennia marina HOM05D000084 ORTHO05D000363 1.8e-09 65.9 63 55.6
Gorai.007G322800 Gossypium raimondii HOM05D000084 ORTHO05D000363 1.8e-09 65.9 47 61.7
Psat5g243040 Pisum sativum HOM05D000084 ORTHO05D000363 1.8e-09 65.9 55 61.8
Aa31LG8G2540 Aethionema arabicum HOM05D000084 ORTHO05D000363 2.3e-09 65.5 52 67.3
Gohir.A11G285000 Gossypium hirsutum HOM05D000084 ORTHO05D000363 2.3e-09 65.5 47 61.7
SalBow7G2105 Salvia bowleyana HOM05D000084 ORTHO05D000363 2.3e-09 65.5 79 43.0
Migut.H01940 Erythranthe guttata HOM05D000084 ORTHO05D000363 3.0e-09 65.1 63 50.8
CARHR043280 Cardamine hirsuta HOM05D000084 ORTHO05D000363 4.0e-09 64.7 52 65.4
Ca_01845_v3 Cicer arietinum L. HOM05D000084 ORTHO05D000363 5.2e-09 64.3 55 61.8
TAR627G0652 Trochodendron aralioides HOM05D000084 ORTHO05D000363 8.9e-09 63.5 60 56.7
Dinv26409 Davidia involucrata HOM05D000084 ORTHO05D000363 1.2e-08 63.2 54 59.3
Eucgr.F01130 Eucalyptus grandis HOM05D000084 ORTHO05D000363 1.2e-08 63.2 57 57.9
Thhalv10011275m.g Eutrema salsugineum HOM05D000084 ORTHO05D000363 1.5e-08 62.8 76 51.3
Sp1g39610 Schrenkiella parvula HOM05D000084 ORTHO05D000363 1.5e-08 62.8 76 52.6
MSTRG.15233 Avicennia marina HOM05D000084 ORTHO05D000363 2.6e-08 62.0 60 50.0
unitig_21.g20070 Utricularia gibba HOM05D000084 ORTHO05D000363 5.7e-08 60.8 63 54.0
CSS0016476 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D000363 1.3e-07 59.7 56 58.9
CSS0020382 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D000363 1.3e-07 59.7 56 58.9
Oeu011689.1 Olea europaea HOM05D000084 ORTHO05D000363 1.3e-07 59.7 63 50.8
Lj3g0010002 Lotus japonicus HOM05D000084 ORTHO05D000363 1.7e-07 59.3 61 49.2
THA.LOC104818077 Tarenaya hassleriana HOM05D000084 ORTHO05D000363 1.7e-07 59.3 53 62.3
Glyma.06G242600 Glycine max HOM05D000084 ORTHO05D000363 8.3e-07 57.0 62 53.2
Glyma.12G155400 Glycine max HOM05D000084 ORTHO05D000363 1.1e-06 56.6 62 54.8
SGA_v2.0_scaffold9G04912 Striga asiatica HOM05D000084 ORTHO05D000363 1.8e-06 55.8 60 45.0
Lj1C843G4 Lonicera japonica HOM05D000084 ORTHO05D000363 3.1e-06 55.1 61 50.8
MBI07_g30181_MAGBIO Magnolia biondii HOM05D000084 ORTHO05D000363 5.4e-06 54.3 48 60.4
Gohir.D13G150700 Gossypium hirsutum HOM05D000084 ORTHO05D000363 7.0e-06 53.9 61 45.9
Gorai.013G168700 Gossypium raimondii HOM05D000084 ORTHO05D000363 7.0e-06 53.9 61 45.9


User provided reference genes

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