Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 0.0e+00 1796.9 914 100.0
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 0.0e+00 1422.1 871 80.9
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 0.0e+00 1399.4 912 78.3
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 5.6e-295 1017.7 908 56.1
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 1.8e-293 1012.7 874 57.3
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 1.4e-285 986.5 878 57.2
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 2.2e-283 979.2 912 53.9
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 2.9e-283 978.8 899 55.2
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 1.4e-282 976.5 909 54.1
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 8.1e-278 960.7 911 54.0
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 4.5e-276 954.9 914 52.4
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 4.5e-276 954.9 911 52.6
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 1.1e-274 950.3 890 54.5
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 1.1e-274 950.3 918 52.4
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 2.5e-274 949.1 917 52.7
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 3.2e-274 948.7 914 52.5
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 5.5e-274 948.0 915 52.8
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 6.0e-273 944.5 919 52.8
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 1.3e-270 936.8 966 50.6
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 8.7e-264 914.1 916 50.5
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 2.2e-262 909.4 911 50.9
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 8.2e-262 907.5 935 49.1
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 4.1e-261 905.2 912 50.8
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 1.3e-259 900.2 964 50.8
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 1.7e-259 899.8 915 50.8
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 2.7e-257 892.5 895 50.6
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 6.1e-257 891.3 919 50.3
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 1.8e-256 889.8 922 50.1
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 5.1e-256 888.3 918 50.7
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 8.8e-256 887.5 917 49.4
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 2.5e-255 885.9 732 58.5
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 9.7e-255 884.0 784 54.6
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 2.2e-254 882.9 928 49.6
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 2.0e-252 876.3 913 49.7
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 3.4e-252 875.5 925 48.2
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 5.9e-252 874.8 933 49.7
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 5.9e-252 874.8 914 50.2
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 8.5e-251 870.9 916 50.1
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.4e-250 870.2 914 49.5
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 4.2e-250 868.6 917 49.5
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 7.2e-250 867.8 917 49.5
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 9.4e-250 867.5 919 49.4
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 3.6e-249 865.5 916 49.7
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 1.4e-248 863.6 931 47.7
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 5.1e-248 861.7 911 48.7
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 6.7e-248 861.3 887 50.4
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 2.6e-247 859.4 914 48.7
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 4.8e-246 855.1 917 48.9
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 4.8e-246 855.1 858 51.0
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 1.5e-242 843.6 916 47.3
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 2.5e-242 842.8 902 49.9
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 2.3e-240 836.3 906 47.1
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 6.7e-240 834.7 910 48.4
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 4.8e-238 828.6 907 48.0
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 4.8e-238 828.6 914 47.5
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 1.6e-236 823.5 907 47.9
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 2.9e-235 819.3 925 47.0
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 1.9e-234 816.6 917 46.6
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 2.7e-233 812.8 790 51.1
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 2.0e-228 796.6 996 44.9
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 7.7e-228 794.7 898 46.3
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 1.9e-226 790.0 910 45.8
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 2.5e-226 789.6 912 45.9
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 2.7e-225 786.2 917 46.0
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 8.0e-225 784.6 915 46.1
Oeu041839.1 Olea europaea HOM05D005193 ORTHO05D006316 5.2e-224 781.9 748 52.0
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 2.9e-219 766.1 944 44.7
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 1.4e-216 757.3 916 44.2
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 1.3e-214 750.7 926 44.5
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 2.9e-214 749.6 907 44.8
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 5.0e-211 738.8 844 46.6
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 1.6e-209 733.8 782 47.7
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 2.6e-207 726.5 743 51.1
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 7.0e-205 718.4 945 42.3
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 3.4e-191 672.9 905 41.5
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 3.4e-191 672.9 836 42.8
Peaxi162Scf00660g00118 Petunia axillaris HOM05D005193 ORTHO05D006316 3.8e-182 642.9 672 50.7
Cpa.g.sc12.274 Carica papaya HOM05D005193 ORTHO05D006316 1.3e-179 634.4 651 51.0
HPP92_008858 Vanilla planifolia HOM05D005193 ORTHO05D006316 6.4e-174 615.5 865 40.2
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 1.6e-164 584.3 872 39.1
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 2.9e-158 563.5 966 36.1
Pp3c16_8580 Physcomitrium patens HOM05D005193 ORTHO05D006316 6.5e-158 562.4 882 37.3
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 1.8e-155 554.3 923 36.7
vmacro09699 Vaccinium macrocarpon HOM05D005193 ORTHO05D006316 4.8e-145 519.6 499 52.9
SMO115G0237 Selaginella moellendorffii HOM05D005193 ORTHO05D006316 1.5e-143 514.6 907 35.9
Nitab4.5_0000168g0220 Nicotiana tabacum HOM05D005193 ORTHO05D006316 5.1e-139 499.6 543 50.6
Lalb_Chr17g0348621 Lupinus albus HOM05D005193 ORTHO05D006316 1.5e-135 488.0 507 50.7
Lj1C877G15 Lonicera japonica HOM05D005193 ORTHO05D006316 4.4e-122 443.4 415 54.7
CBR_g49709 Chara braunii HOM05D005193 ORTHO05D000048 9.1e-120 435.6 860 32.8
CSS0020168 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 1.4e-115 421.8 478 48.7
Nitab4.5_0003450g0040 Nicotiana tabacum HOM05D005193 ORTHO05D006316 1.4e-112 411.8 512 48.0
arahy.Tifrunner.gnm1.ann1.6PV7EE Arachis hypogaea HOM05D005193 ORTHO05D006316 3.1e-112 410.6 431 51.0
Lalb_Chr17g0348631 Lupinus albus HOM05D005193 ORTHO05D006316 5.6e-101 373.2 392 48.0
AagrBONN_evm.TU.Sc2ySwM_344.2169 Anthoceros agrestis HOM05D005193 ORTHO05D006316 8.9e-99 365.9 646 36.7
ATR0585G046 Amborella trichopoda HOM05D005193 ORTHO05D006316 1.7e-94 351.7 402 46.0
Nitab4.5_0003450g0030 Nicotiana tabacum HOM05D005193 ORTHO05D006316 1.1e-83 315.8 404 43.3
CDE02G4624 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.1e-76 291.6 379 44.1
arahy.Tifrunner.gnm1.ann1.89LBMG Arachis hypogaea HOM05D005193 ORTHO05D006316 1.1e-75 289.3 317 47.3
Lj1C877G9 Lonicera japonica HOM05D005193 ORTHO05D006316 1.4e-72 278.9 268 56.7
SalBow8G4471 Salvia bowleyana HOM05D005193 ORTHO05D006316 2.4e-72 278.1 428 37.1
Lsat_1_v5_gn_6_67380 Lactuca sativa HOM05D005193 ORTHO05D006316 4.9e-65 253.8 192 68.8
Lsat_1_v5_gn_9_67960 Lactuca sativa HOM05D005193 ORTHO05D006316 4.9e-65 253.8 192 68.8
CDE02G0254 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.3e-62 245.0 298 45.0
Nitab4.5_0000168g0230 Nicotiana tabacum HOM05D005193 ORTHO05D006316 7.1e-56 223.4 210 51.0
AUR62015822 Chenopodium quinoa HOM05D005193 ORTHO05D006316 2.8e-52 211.5 533 28.7
Solyc12g005090.3 Solanum lycopersicum HOM05D005193 ORTHO05D006316 2.2e-49 201.8 200 49.5
CAN.G1219.3 Capsicum annuum HOM05D005193 ORTHO05D006316 2.1e-44 185.3 183 47.5
arahy.Tifrunner.gnm1.ann1.DP08C5 Arachis hypogaea HOM05D005193 ORTHO05D006316 1.9e-40 172.2 254 40.6
arahy.Tifrunner.gnm1.ann1.SW2PFC Arachis hypogaea HOM05D005193 ORTHO05D006316 1.9e-40 172.2 254 40.6
Peaxi162Scf00660g00119 Petunia axillaris HOM05D005193 ORTHO05D006316 1.9e-37 162.2 168 47.6
CDE02G4589 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.6e-34 151.8 254 38.2
CDE02G0065 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.3e-33 149.4 225 37.8
Gorai.011G223800 Gossypium raimondii HOM05D005193 ORTHO05D006316 1.4e-32 146.0 165 46.1
ATR0585G123 Amborella trichopoda HOM05D005193 ORTHO05D006316 2.8e-28 131.7 182 39.0
Gohir.D10G199632 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.0e-22 113.2 136 44.9
CAN.G1219.2 Capsicum annuum HOM05D005193 ORTHO05D006316 1.4e-22 112.8 92 53.3
Sabra06G0024500 Salix brachista HOM05D005193 ORTHO05D006316 2.3e-22 112.1 84 63.1
CSS0028155 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 3.9e-22 111.3 93 54.8
CSS0039097 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 1.5e-21 109.4 90 56.7
Cpa.g.sc12.275 Carica papaya HOM05D005193 ORTHO05D006316 1.3e-20 106.3 97 48.5
Sabra16G0098300 Salix brachista HOM05D005193 ORTHO05D006316 1.3e-20 106.3 162 41.4
arahy.Tifrunner.gnm1.ann1.BLY3DW Arachis hypogaea HOM05D005193 ORTHO05D006316 2.2e-20 105.5 99 50.5
Aqoxy4G00029 Aquilegia oxysepala HOM05D002071 ORTHO05D002109 6.3e-20 104.0 101 45.5
AagrBONN_evm.TU.Sc2ySwM_362.1473 Anthoceros agrestis HOM05D005193 ORTHO05D006316 1.1e-19 103.2 91 53.8
Oeu041837.1 Olea europaea HOM05D005193 ORTHO05D006316 1.2e-18 99.8 94 51.1
ATR0585G071 Amborella trichopoda HOM05D005193 ORTHO05D006316 4.5e-18 97.8 139 33.8
SalBow8G0199 Salvia bowleyana HOM05D005193 ORTHO05D006316 2.9e-17 95.1 93 51.6
EL10Ac4g07765 Beta vulgaris HOM05D005193 ORTHO05D006316 2.5e-16 92.0 186 36.0
CSS0047254 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 5.5e-16 90.9 188 35.1
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 2.1e-15 89.0 97 59.8
Gorai.001G274400 Gossypium raimondii HOM05D005193 ORTHO05D006316 4.7e-15 87.8 123 39.0
Gohir.D08G017066 Gossypium hirsutum HOM05D005193 ORTHO05D006316 9.7e-13 80.1 75 48.0
GSVIVG01037691001 Vitis vinifera HOM05D005193 ORTHO05D006316 6.3e-12 77.4 125 43.2
Haze_09712 Corylus avellana HOM05D005193 ORTHO05D006316 1.4e-11 76.3 111 45.0
SEGI_35263 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 5.3e-11 74.3 67 49.3
Cpa.g.sc12.273 Carica papaya HOM05D005193 ORTHO05D006316 3.5e-10 71.6 119 40.3
SEGI_26698 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 7.7e-10 70.5 94 33.0
SEGI_10601 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 1.1e-08 66.6 75 42.7
TPR.G2800 Trifolium pratense HOM05D005193 ORTHO05D006316 7.2e-08 63.9 124 36.3
MD16G1253600 Malus domestica HOM05D005193 ORTHO05D006316 1.2e-07 63.2 58 53.4
SEGI_24122 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 2.1e-07 62.4 77 41.6
CDE02G4328 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.4e-06 59.7 78 41.0
Hund02002 Selenicereus undatus HOM05D005193 ORTHO05D006316 1.4e-06 59.7 60 48.3
Eucgr.F03486 Eucalyptus grandis HOM05D005193 ORTHO05D006316 1.8e-06 59.3 112 34.8


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