Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G2607 Erigeron canadensis HOM05D006388 ORTHO05D008026 4.3e-267 924.1 460 100.0
HanXRQChr05g0141681 Helianthus annuus HOM05D006388 ORTHO05D008026 4.3e-187 658.3 462 73.2
Lsat_1_v5_gn_8_64640 Lactuca sativa HOM05D006388 ORTHO05D008026 2.0e-171 606.3 443 70.7
Dinv03508 Davidia involucrata HOM05D006388 ORTHO05D008026 4.1e-145 518.8 476 57.8
Lj5A168G91 Lonicera japonica HOM05D006388 ORTHO05D008026 2.0e-144 516.5 500 56.6
Cfa017806 Carpinus fangiana HOM05D006388 ORTHO05D008026 2.0e-139 500.0 472 58.7
CiPaw.15G107500 Carya illinoinensis HOM05D006388 ORTHO05D008026 7.8e-136 488.0 467 57.8
TAR622G0711 Trochodendron aralioides HOM05D006388 ORTHO05D008026 8.9e-132 474.6 469 57.6
TWI15G1133 Tripterygium wilfordii HOM05D006388 ORTHO05D008026 3.4e-131 472.6 462 56.1
COL.COLO4_30052 Corchorus olitorius HOM05D006388 ORTHO05D008026 7.8e-128 461.5 463 54.4
Medtr6g068920 Medicago truncatula HOM05D006388 ORTHO05D008026 1.3e-127 460.7 508 50.8
TPR.G31361 Trifolium pratense HOM05D006388 ORTHO05D008026 1.3e-127 460.7 507 50.5
arahy.Tifrunner.gnm1.ann1.V0741V Arachis hypogaea HOM05D006388 ORTHO05D008026 1.7e-127 460.3 504 51.4
arahy.Tifrunner.gnm1.ann1.586MWM Arachis hypogaea HOM05D006388 ORTHO05D008026 5.1e-127 458.8 504 50.6
PSO063G3611 Papaver somniferum HOM05D006388 ORTHO05D008026 9.5e-126 454.5 466 53.2
Haze_18407 Corylus avellana HOM05D006388 ORTHO05D008026 2.8e-125 453.0 469 55.2
Lj2g0005711 Lotus japonicus HOM05D006388 ORTHO05D008026 2.8e-125 453.0 506 50.4
DCAR_014753 Daucus carota HOM05D001996 ORTHO05D002072 6.2e-125 451.8 406 59.6
Potri.004G067200 Populus trichocarpa HOM05D006388 ORTHO05D008026 1.4e-124 450.7 478 52.9
ClCG10G003610 Citrullus lanatus HOM05D006388 ORTHO05D008026 4.0e-124 449.1 474 53.2
Psat1g118840 Pisum sativum HOM05D006388 ORTHO05D008026 6.8e-124 448.4 508 49.0
Duzib128G0602 Durio zibethinus HOM05D006388 ORTHO05D008026 8.9e-124 448.0 467 52.0
Prupe.5G245000 Prunus persica HOM05D006388 ORTHO05D008026 1.5e-123 447.2 484 53.7
Nitab4.5_0007717g0060 Nicotiana tabacum HOM05D006388 ORTHO05D008026 4.4e-123 445.7 461 52.9
Thecc.05G197200 Theobroma cacao HOM05D006388 ORTHO05D008026 7.6e-123 444.9 464 52.6
Gohir.D08G245800 Gossypium hirsutum HOM05D006388 ORTHO05D008026 9.9e-123 444.5 469 52.0
Gorai.004G262300 Gossypium raimondii HOM05D006388 ORTHO05D008026 9.9e-123 444.5 469 51.8
VMungo0464G0944 Vigna mungo HOM05D006388 ORTHO05D008026 9.9e-123 444.5 505 48.5
RcHm_v2.0_Chr7g0176951 Rosa chinensis HOM05D006388 ORTHO05D008026 2.9e-122 443.0 462 54.5
CsaV3_3G003610 Cucumis sativus L. HOM05D006388 ORTHO05D008026 3.8e-122 442.6 477 50.7
Gohir.A08G225400 Gossypium hirsutum HOM05D006388 ORTHO05D008026 6.4e-122 441.8 469 51.4
Atru.chr6.990 Acer truncatum HOM05D006388 ORTHO05D008026 8.4e-122 441.4 464 53.2
Nn4g26682 Nelumbo nucifera HOM05D006388 ORTHO05D008026 1.1e-121 441.0 446 56.3
MELO3C014032.2 Cucumis melo HOM05D006388 ORTHO05D008026 1.4e-121 440.7 477 51.4
Nitab4.5_0001495g0050 Nicotiana tabacum HOM05D006388 ORTHO05D008026 1.9e-121 440.3 457 52.7
Lalb_Chr03g0034281 Lupinus albus HOM05D006388 ORTHO05D008026 7.1e-121 438.3 508 49.4
FAN13G2679 Fragaria x ananassa HOM05D006388 ORTHO05D008026 6.0e-120 435.3 462 54.3
Sc10g0008630 Simmondsia chinensis HOM05D006388 ORTHO05D008026 6.0e-120 435.3 458 52.0
Cc00_g12620 Coffea canephora HOM05D006388 ORTHO05D008026 1.3e-119 434.1 484 51.2
FvH4_5g18560 Fragaria vesca HOM05D006388 ORTHO05D008026 1.3e-119 434.1 462 53.9
Sabra04G0045000 Salix brachista HOM05D006388 ORTHO05D008026 1.7e-119 433.7 506 49.4
FAN08G3112 Fragaria x ananassa HOM05D006388 ORTHO05D008026 3.0e-119 433.0 461 54.2
MD14G1246700 Malus domestica HOM05D006388 ORTHO05D008026 3.9e-119 432.6 485 51.8
FAN18G2055 Fragaria x ananassa HOM05D006388 ORTHO05D008026 6.6e-119 431.8 462 53.7
CANSAT80G2370 Cannabis sativa HOM05D006388 ORTHO05D008026 1.5e-118 430.6 456 52.6
Phvul.004G137100 Phaseolus vulgaris HOM05D006388 ORTHO05D008026 2.5e-118 429.9 463 52.1
Glyma.16G210900 Glycine max HOM05D006388 ORTHO05D008026 3.3e-118 429.5 509 48.1
PGR044G0861 Punica granatum HOM05D006388 ORTHO05D008026 1.2e-117 427.6 468 50.0
Eucgr.K02329 Eucalyptus grandis HOM05D006388 ORTHO05D008026 4.7e-117 425.6 470 51.7
PGSC0003DMG400015280 Solanum tuberosum HOM05D006388 ORTHO05D008026 1.4e-116 424.1 466 50.6
MBI03_g13439_MAGBIO Magnolia biondii HOM05D006388 ORTHO05D008026 3.1e-116 422.9 463 51.0
Cpa.g.sc168.3 Carica papaya HOM05D006388 ORTHO05D008026 5.2e-116 422.2 456 51.8
Sopen03g029690 Solanum pennellii HOM05D006388 ORTHO05D008026 5.2e-116 422.2 471 49.5
CARHR066430 Cardamine hirsuta HOM05D006388 ORTHO05D008026 6.9e-116 421.8 455 52.3
Rhsim08G0125300 Rhododendron simsii HOM05D006388 ORTHO05D008026 8.9e-116 421.4 532 47.6
Ca_25279_v3 Cicer arietinum L. HOM05D006388 ORTHO05D008026 3.4e-115 419.5 487 49.1
Sed0000986 Sechium edule HOM05D006388 ORTHO05D008026 7.6e-115 418.3 475 49.9
Oeu063709.3 Olea europaea HOM05D006388 ORTHO05D008026 1.7e-114 417.2 476 51.5
AT1G73380 Arabidopsis thaliana HOM05D006388 ORTHO05D008026 2.1e-112 410.2 452 51.8
Manes.02G226400 Manihot esculenta HOM05D006388 ORTHO05D008026 2.1e-112 410.2 454 51.3
CDE04G0152 Ceratophyllum demersum HOM05D006388 ORTHO05D008026 4.6e-112 409.1 488 48.0
ClCG00G000350 Citrullus lanatus HOM05D006388 ORTHO05D008026 4.6e-112 409.1 499 48.3
EL10Ac8g19473 Beta vulgaris HOM05D006388 ORTHO05D008026 1.0e-111 407.9 473 48.0
CAN.G861.30 Capsicum annuum HOM05D006388 ORTHO05D008026 3.9e-111 406.0 464 47.8
Carub.0002s2012 Capsella rubella HOM05D006388 ORTHO05D008026 8.7e-111 404.8 458 51.5
AL2G33160 Arabidopsis lyrata HOM05D006388 ORTHO05D008026 1.1e-110 404.4 451 51.9
SalBow5G5586 Salvia bowleyana HOM05D006388 ORTHO05D008026 3.3e-110 402.9 474 48.9
Aa31LG4G3650 Aethionema arabicum HOM05D006388 ORTHO05D008026 7.3e-110 401.7 454 50.2
ATR0124G024 Amborella trichopoda HOM05D006388 ORTHO05D008026 7.3e-110 401.7 489 44.6
Thhalv10018586m.g Eutrema salsugineum HOM05D006388 ORTHO05D008026 1.8e-108 397.1 456 50.0
Sp5g28310 Schrenkiella parvula HOM05D006388 ORTHO05D008026 1.8e-108 397.1 451 49.7
C02p31040 Brassica napus HOM05D006388 ORTHO05D008026 7.6e-107 391.7 450 49.8
AUR62040788 Chenopodium quinoa HOM05D006388 ORTHO05D008026 7.6e-107 391.7 408 52.5
Ah.14g085810 Amaranthus hybridus HOM05D006388 ORTHO05D008026 1.7e-106 390.6 467 46.5
TPR.G3132 Trifolium pratense HOM05D006388 ORTHO05D008026 4.9e-106 389.0 425 50.8
BraA02t06912Z Brassica rapa HOM05D006388 ORTHO05D008026 3.2e-105 386.3 449 50.1
Aqoxy3G04328 Aquilegia oxysepala HOM05D006388 ORTHO05D008026 1.0e-103 381.3 470 48.1
BolC2t09150H Brassica oleracea HOM05D006388 ORTHO05D008026 3.0e-103 379.8 449 49.0
THA.LOC104813931 Tarenaya hassleriana HOM05D006388 ORTHO05D008026 3.0e-103 379.8 451 48.8
A02p18710 Brassica napus HOM05D006388 ORTHO05D008026 1.5e-102 377.5 449 49.0
SGA_v2.0_scaffold25G10731 Striga asiatica HOM05D006388 ORTHO05D008026 1.9e-102 377.1 485 47.2
HPP92_007318 Vanilla planifolia HOM05D006388 ORTHO05D008026 6.0e-96 355.5 450 46.9
Solyc03g019930.4 Solanum lycopersicum HOM05D006388 ORTHO05D008026 1.9e-94 350.5 447 45.4
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 1.1e-92 344.7 404 50.7
GSVIVG01024248001 Vitis vinifera HOM05D006388 ORTHO05D008026 4.0e-92 342.8 446 46.6
Migut.O00278 Erythranthe guttata HOM05D006388 ORTHO05D008026 6.5e-90 335.5 443 45.1
vmacro17751 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 5.1e-87 325.9 386 49.7
Ciclev10020647m.g Citrus clementina HOM05D006388 ORTHO05D008026 9.7e-86 321.6 391 48.3
Hund22363 Selenicereus undatus HOM05D006388 ORTHO05D008026 4.8e-85 319.3 403 47.4
Actinidia34678 Actinidia chinensis HOM05D006388 ORTHO05D008026 8.7e-79 298.5 341 50.7
SEGI_28863 Sequoiadendron giganteum HOM05D006388 ORTHO05D008026 2.4e-76 290.4 468 37.8
unitig_749.g14324 Utricularia gibba HOM05D006388 ORTHO05D008026 6.9e-76 288.9 447 41.2
Zm00001eb068340 Zea mays HOM05D006388 ORTHO05D008026 1.4e-73 281.2 449 40.3
ClCG00G006010 Citrullus lanatus HOM05D006388 ORTHO05D008026 3.1e-68 263.5 349 46.1
Duzib128G0966 Durio zibethinus HOM05D006388 ORTHO05D008026 4.5e-67 259.6 199 66.3
Peaxi162Scf00171g00011 Petunia axillaris HOM05D006388 ORTHO05D008026 7.7e-67 258.8 199 64.3
Glyma.09G161700 Glycine max HOM05D006388 ORTHO05D008026 8.5e-66 255.4 191 64.4
Os10g0489800 Oryza sativa ssp. japonica HOM05D006388 ORTHO05D008026 4.2e-65 253.1 310 46.1
TPR.G27930 Trifolium pratense HOM05D006388 ORTHO05D008026 2.0e-62 244.2 233 56.7
Mapoly0114s0003 Marchantia polymorpha HOM05D006388 ORTHO05D008026 1.3e-61 241.5 505 32.7
AagrBONN_evm.TU.Sc2ySwM_344.3994 Anthoceros agrestis HOM05D006388 ORTHO05D008026 4.8e-61 239.6 550 32.5
Duzib128G1156 Durio zibethinus HOM05D006388 ORTHO05D008026 2.8e-53 213.8 238 49.6
AUR62038569 Chenopodium quinoa HOM05D006388 ORTHO05D008026 3.5e-51 206.8 266 46.6
Gohir.A08G079000 Gossypium hirsutum HOM05D006388 ORTHO05D008026 7.7e-51 205.7 303 42.6
SMO169G0166 Selaginella moellendorffii HOM05D006388 ORTHO05D008026 8.5e-50 202.2 416 33.7
Pp3c1_7520 Physcomitrium patens HOM05D006388 ORTHO05D008026 3.6e-48 196.8 508 28.7
CSS0002556 Camellia sinensis var. sinensis HOM05D006388 ORTHO05D008026 2.0e-46 191.0 124 72.6
ClCG00G000360 Citrullus lanatus HOM05D006388 ORTHO05D008026 7.0e-44 182.6 124 71.8
FAN04G1542 Fragaria x ananassa HOM05D006388 ORTHO05D008026 8.6e-42 175.6 233 45.9
CBR_g36351 Chara braunii HOM05D006388 ORTHO05D008026 2.1e-32 144.4 171 41.5
TPR.G16379 Trifolium pratense HOM05D006388 ORTHO05D008026 1.0e-26 125.6 90 67.8
vmacro17752 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 1.7e-26 124.8 69 82.6
TPR.G31360 Trifolium pratense HOM05D006388 ORTHO05D008026 6.2e-24 116.3 69 78.3
Glyma.09G161751 Glycine max HOM05D006388 ORTHO05D008026 7.8e-19 99.4 107 47.7
Actinidia34679 Actinidia chinensis HOM05D006388 ORTHO05D008026 7.3e-17 92.8 51 86.3
PGR044G2638 Punica granatum HOM05D006388 ORTHO05D008026 2.6e-14 84.3 111 47.7
Hma1.2p1_0800F.1_g220210 Hydrangea macrophylla HOM05D006388 ORTHO05D008026 5.8e-14 83.2 55 74.5
MapolyY_B0043 Marchantia polymorpha HOM05D006388 ORTHO05D008026 1.9e-12 78.2 114 37.7
TPR.G46 Trifolium pratense HOM05D006388 ORTHO05D008026 9.2e-12 75.9 92 48.9
Zm00001eb050690 Zea mays HOM05D006388 ORTHO05D008026 6.2e-08 63.2 48 62.5


User provided reference genes

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