Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 9.7e-65 250.0 125 100.0
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 7.7e-46 187.2 125 76.8
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 5.2e-42 174.5 124 75.8
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 6.1e-35 151.0 131 64.1
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 3.0e-34 148.7 125 62.4
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 2.6e-33 145.6 101 72.3
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 3.4e-33 145.2 127 63.8
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 9.8e-33 143.7 123 63.4
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 2.8e-32 142.1 126 61.1
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 2.8e-32 142.1 127 61.4
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 2.8e-32 142.1 127 59.1
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 4.9e-32 141.4 125 60.0
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 4.9e-32 141.4 131 60.3
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 6.3e-32 141.0 137 59.9
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 6.3e-32 141.0 127 60.6
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 8.3e-32 140.6 128 62.5
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 1.1e-31 140.2 113 59.3
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 1.1e-31 140.2 125 59.2
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 1.1e-31 140.2 127 59.8
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 1.8e-31 139.4 126 62.7
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 2.4e-31 139.0 133 61.7
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 3.1e-31 138.7 125 60.0
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 3.1e-31 138.7 117 61.5
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 4.1e-31 138.3 133 58.6
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 4.1e-31 138.3 131 61.1
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 4.1e-31 138.3 129 57.4
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 4.1e-31 138.3 128 57.0
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 5.4e-31 137.9 125 59.2
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 7.0e-31 137.5 131 60.3
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 7.0e-31 137.5 126 62.7
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 9.2e-31 137.1 133 60.9
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 9.2e-31 137.1 133 60.9
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 9.2e-31 137.1 132 59.8
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 9.2e-31 137.1 125 60.0
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 9.2e-31 137.1 136 58.8
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 2.0e-30 136.0 125 60.0
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.0e-30 136.0 125 60.0
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.0e-30 136.0 125 60.0
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.0e-30 136.0 125 60.0
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 2.0e-30 136.0 126 60.3
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 2.7e-30 135.6 112 61.6
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 2.7e-30 135.6 109 65.1
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 2.7e-30 135.6 126 61.9
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 2.7e-30 135.6 126 57.1
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 3.5e-30 135.2 97 68.0
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 4.5e-30 134.8 126 61.1
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 4.5e-30 134.8 79 78.5
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 5.9e-30 134.4 132 59.1
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 7.8e-30 134.0 127 56.7
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 7.8e-30 134.0 126 60.3
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.0e-29 133.7 128 57.8
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 1.0e-29 133.7 128 57.8
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 1.3e-29 133.3 125 59.2
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 1.7e-29 132.9 133 59.4
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 2.3e-29 132.5 128 56.2
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 2.3e-29 132.5 127 59.1
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 3.8e-29 131.7 98 71.4
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 3.8e-29 131.7 117 61.5
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 3.8e-29 131.7 129 56.6
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 5.0e-29 131.3 110 62.7
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 6.6e-29 131.0 126 54.0
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 6.6e-29 131.0 125 58.4
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 6.6e-29 131.0 130 57.7
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 8.6e-29 130.6 125 59.2
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 1.1e-28 130.2 125 59.2
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 1.1e-28 130.2 125 59.2
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 1.1e-28 130.2 125 60.0
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 1.1e-28 130.2 115 60.0
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 1.1e-28 130.2 114 59.6
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 1.1e-28 130.2 125 61.6
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 1.5e-28 129.8 125 59.2
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 1.5e-28 129.8 80 78.8
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 2.5e-28 129.0 98 69.4
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 2.5e-28 129.0 125 59.2
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 3.3e-28 128.6 125 58.4
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 9.5e-28 127.1 107 65.4
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 1.6e-27 126.3 126 57.1
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 4.7e-27 124.8 74 82.4
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 6.1e-27 124.4 122 57.4
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 6.1e-27 124.4 78 76.9
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 4.0e-26 121.7 116 56.9
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 4.0e-26 121.7 107 63.6
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 6.8e-26 120.9 114 57.9
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 1.2e-25 120.2 67 80.6
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 1.7e-24 116.3 69 73.9
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 2.9e-24 115.5 91 64.8
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 6.4e-24 114.4 71 73.2
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 2.4e-23 112.5 125 52.8
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 2.7e-22 109.0 72 76.4
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 4.6e-22 108.2 132 44.7
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 7.8e-22 107.5 132 48.5
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 1.1e-20 103.6 71 66.2
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 6.2e-19 97.8 112 53.6
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 1.8e-18 96.3 48 87.5
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 3.1e-18 95.5 49 87.8
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 9.2e-15 84.0 88 50.0
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 9.2e-15 84.0 136 41.2
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 1.4e-10 70.1 65 55.4


User provided reference genes

Program Settings