Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 2.3e-252 875.2 472 100.0
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 2.3e-66 257.3 414 41.5
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 1.4e-60 238.0 360 44.4
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 1.2e-43 181.8 398 36.9
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 1.7e-37 161.4 428 34.1
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 2.9e-37 160.6 353 34.8
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 5.2e-34 149.8 428 32.5
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 5.2e-34 149.8 422 32.9
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 8.8e-34 149.1 440 32.0
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 8.8e-34 149.1 409 32.0
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 1.5e-33 148.3 407 32.4
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 7.4e-33 146.0 392 34.9
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 7.4e-33 146.0 389 31.6
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.3e-32 145.2 442 31.2
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 6.3e-32 142.9 388 32.7
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 1.8e-31 141.4 399 31.6
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 9.1e-31 139.0 426 33.1
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 2.6e-30 137.5 385 34.5
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 5.9e-30 136.3 468 29.5
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 1.0e-29 135.6 372 33.9
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 1.3e-29 135.2 389 31.9
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 1.7e-29 134.8 461 30.2
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 1.1e-28 132.1 463 30.5
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 1.5e-28 131.7 379 31.7
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 4.2e-28 130.2 369 32.5
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 6.1e-27 126.3 429 29.8
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 2.3e-26 124.4 401 31.4
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 5.2e-26 123.2 333 29.7
Actinidia38316 Actinidia chinensis HOM05D003426 ORTHO05D003816 4.4e-25 120.2 446 29.6
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 5.7e-25 119.8 330 32.4
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 7.5e-25 119.4 394 28.2
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 9.7e-25 119.0 223 35.4
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 2.2e-24 117.9 207 36.7
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 2.8e-24 117.5 254 36.6
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 8.3e-24 115.9 378 28.8
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 1.8e-23 114.8 353 30.3
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 3.1e-23 114.0 216 39.4
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 4.1e-23 113.6 418 28.0
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 7.0e-23 112.8 435 29.4
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 2.0e-22 111.3 400 28.8
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 2.0e-22 111.3 440 29.3
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 4.5e-22 110.2 339 34.8
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 4.5e-22 110.2 515 26.2
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 7.7e-22 109.4 370 29.5
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.3e-21 108.6 280 34.3
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 1.3e-21 108.6 360 30.6
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 2.2e-21 107.8 399 29.3
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 8.5e-21 105.9 362 30.7
PGSC0003DMG400037110 Solanum tuberosum HOM05D003426 ORTHO05D003816 7.2e-20 102.8 174 36.2
SalBow1G0569 Salvia bowleyana HOM05D003426 ORTHO05D003816 1.2e-19 102.1 346 31.2
PGSC0003DMG400036381 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.2e-19 102.1 320 30.9
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 2.7e-19 100.9 320 30.9
Nitab4.5_0000123g0610 Nicotiana tabacum HOM05D003426 ORTHO05D007302 6.1e-19 99.8 181 34.3
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 1.0e-18 99.0 370 30.0
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 1.4e-18 98.6 449 28.1
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 2.3e-18 97.8 346 29.2
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 3.0e-18 97.4 443 28.4
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 3.0e-18 97.4 327 29.4
Sopen10g019310 Solanum pennellii HOM05D003426 ORTHO05D003816 5.2e-18 96.7 184 32.6
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 8.8e-18 95.9 357 28.0
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 8.8e-18 95.9 354 31.1
arahy.Tifrunner.gnm1.ann1.N5DK6E Arachis hypogaea HOM05D003426 ORTHO05D003816 1.2e-17 95.5 351 27.1
DCAR_019401 Daucus carota HOM05D003426 ORTHO05D003816 1.2e-17 95.5 175 34.9
Solyc10g048140.2 Solanum lycopersicum HOM05D003426 ORTHO05D003816 1.5e-17 95.1 206 32.0
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 2.0e-17 94.7 398 28.4
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 2.0e-17 94.7 354 28.8
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 2.6e-17 94.4 387 27.9
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 4.4e-17 93.6 327 28.7
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 4.4e-17 93.6 397 28.5
Actinidia10526 Actinidia chinensis HOM05D003426 ORTHO05D003816 5.7e-17 93.2 367 26.7
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 7.5e-17 92.8 344 30.8
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 9.8e-17 92.4 188 34.0
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 9.8e-17 92.4 327 28.7
HanXRQChr10g0313661 Helianthus annuus HOM05D003426 ORTHO05D003816 9.8e-17 92.4 185 31.9
PGSC0003DMG400040189 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.7e-16 91.7 177 36.7
VMungo1215G0444 Vigna mungo HOM05D003426 ORTHO05D003816 1.7e-16 91.7 207 35.3
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 2.8e-16 90.9 391 27.1
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 2.8e-16 90.9 391 27.1
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 3.7e-16 90.5 406 27.6
arahy.Tifrunner.gnm1.ann1.H6N2T4 Arachis hypogaea HOM05D003426 ORTHO05D003816 4.8e-16 90.1 358 24.0
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 4.8e-16 90.1 391 28.1
Dinv08190 Davidia involucrata HOM05D003426 ORTHO05D003816 3.1e-15 87.4 348 28.4
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 4.1e-15 87.0 298 33.2
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 5.4e-15 86.7 429 25.6
Glyma.02G205001 Glycine max HOM05D003426 ORTHO05D003816 1.6e-14 85.1 198 28.3
vmacro06066 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 1.6e-14 85.1 251 31.9
Migut.J01365 Erythranthe guttata HOM05D003426 ORTHO05D003816 2.7e-14 84.3 348 29.0
Nitab4.5_0002290g0120 Nicotiana tabacum HOM05D003426 ORTHO05D003816 3.5e-14 84.0 178 30.9
Lsat_1_v5_gn_5_90301 Lactuca sativa HOM05D003426 ORTHO05D003816 4.5e-14 83.6 356 27.5
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 4.5e-14 83.6 240 31.7
THA.LOC104803917 Tarenaya hassleriana HOM05D003426 ORTHO05D003816 4.5e-14 83.6 317 28.4
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 5.9e-14 83.2 367 27.0
Sed0007563 Sechium edule HOM05D003426 ORTHO05D003816 1.0e-13 82.4 316 27.2
PGSC0003DMG400040160 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.0e-13 82.4 188 31.9
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 2.3e-13 81.3 397 26.4
Actinidia02402 Actinidia chinensis HOM05D000650 ORTHO05D007302 2.5e-12 77.8 153 34.0
PGSC0003DMG400038550 Solanum tuberosum HOM05D003426 ORTHO05D003816 3.3e-12 77.4 82 47.6
Rhsim02G0212600 Rhododendron simsii HOM05D003426 ORTHO05D003816 5.5e-12 76.6 405 25.9
ATR0580G137 Amborella trichopoda HOM05D003426 ORTHO05D003816 1.2e-11 75.5 179 29.6
CSS0027727 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.2e-11 75.5 144 41.0
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.2e-11 75.5 413 24.5
ClCG02G014420 Citrullus lanatus HOM05D003426 ORTHO05D003816 2.8e-11 74.3 216 27.8
CSS0012807 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 4.7e-11 73.6 170 30.6
SGA_v2.0_scaffold1435G53950 Striga asiatica HOM05D003426 ORTHO05D003816 8.0e-11 72.8 251 29.9
PGSC0003DMG400043134 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.0e-10 72.4 90 45.6
Lsat_1_v5_gn_5_89740 Lactuca sativa HOM05D003426 ORTHO05D003816 1.4e-10 72.0 285 30.2
Thhalv10000536m.g Eutrema salsugineum HOM05D012895 ORTHO05D014428 1.8e-10 71.6 353 28.3
Sc18g0002970 Simmondsia chinensis HOM05D003426 ORTHO05D003816 1.8e-10 71.6 339 26.5
ClCG06G012490 Citrullus lanatus HOM05D003426 ORTHO05D003816 3.0e-10 70.9 323 24.5
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 5.2e-10 70.1 214 30.8
FAN26G0769 Fragaria x ananassa HOM05D003426 ORTHO05D003816 6.8e-10 69.7 403 24.1
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 6.8e-10 69.7 379 24.3
Lj4g0006994 Lotus japonicus HOM05D003426 ORTHO05D003816 1.5e-09 68.6 375 26.1
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 2.0e-09 68.2 332 26.5
Cpa.g.sc20.26 Carica papaya HOM05D000650 ORTHO05D000735 2.6e-09 67.8 151 29.8
Phvul.002G214600 Phaseolus vulgaris HOM05D000650 ORTHO05D007302 2.6e-09 67.8 142 30.3
Nn1g05634 Nelumbo nucifera HOM05D000650 ORTHO05D000735 4.4e-09 67.0 173 31.8
FAN23G3106 Fragaria x ananassa HOM05D003426 ORTHO05D003816 7.5e-09 66.2 394 23.6
FAN28G0527 Fragaria x ananassa HOM05D003426 ORTHO05D003816 7.5e-09 66.2 367 23.7
CsaV3_2G007580 Cucumis sativus L. HOM05D003426 ORTHO05D003816 1.3e-08 65.5 155 29.7
QL02p093534 Quercus lobata HOM05D003426 ORTHO05D003816 1.3e-08 65.5 130 40.8
QL11p025817 Quercus lobata HOM05D000650 ORTHO05D007302 1.3e-08 65.5 134 32.1
CSS0023548 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D007302 1.7e-08 65.1 151 29.8
Actinidia14135 Actinidia chinensis HOM05D022929 ORTHO05D003816 2.2e-08 64.7 224 27.7
MELO3C004128.2 Cucumis melo HOM05D003426 ORTHO05D003816 2.2e-08 64.7 206 29.1
MELO3C010212.2 Cucumis melo HOM05D003426 ORTHO05D003816 2.8e-08 64.3 334 24.0
PGSC0003DMG400042655 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.8e-08 64.3 81 43.2
Nitab4.5_0011705g0030 Nicotiana tabacum HOM05D003426 ORTHO05D003816 3.7e-08 63.9 79 45.6
Sopen10g015150 Solanum pennellii HOM05D003426 ORTHO05D003816 4.9e-08 63.5 84 42.9
Lalb_Chr13g0300811 Lupinus albus HOM05D003426 ORTHO05D003816 8.3e-08 62.8 270 30.4
Dinv17422 Davidia involucrata HOM05D003426 ORTHO05D003816 1.1e-07 62.4 267 25.8
Migut.B00537 Erythranthe guttata HOM05D000650 ORTHO05D000735 1.1e-07 62.4 200 26.5
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 1.4e-07 62.0 80 42.5
PGSC0003DMG400044972 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.4e-07 62.0 149 31.5
Lj5A228T44 Lonicera japonica HOM05D003426 ORTHO05D007302 1.8e-07 61.6 144 31.9
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 1.8e-07 61.6 97 38.1
Sopen07g001820 Solanum pennellii HOM05D003426 ORTHO05D003816 1.8e-07 61.6 62 58.1
Hund02984 Selenicereus undatus HOM05D016866 ORTHO05D015160 2.4e-07 61.2 164 34.1
Lj5A228T42 Lonicera japonica HOM05D000650 ORTHO05D007302 3.2e-07 60.8 142 31.0
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 3.2e-07 60.8 91 39.6
FvH4_1g00800 Fragaria vesca HOM05D003426 ORTHO05D003816 4.1e-07 60.5 388 23.5
vmacro01871 Vaccinium macrocarpon HOM05D000650 ORTHO05D007302 4.1e-07 60.5 161 31.1
DCAR_029285 Daucus carota HOM05D000650 ORTHO05D007302 5.4e-07 60.1 139 33.1
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 5.4e-07 60.1 85 45.9
Psat4g010040 Pisum sativum HOM05D003426 ORTHO05D003816 5.4e-07 60.1 84 40.5
TWI59G0327 Tripterygium wilfordii HOM05D000650 ORTHO05D007302 5.4e-07 60.1 163 28.8
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 7.0e-07 59.7 89 40.4
CARHR184730 Cardamine hirsuta HOM05D012895 ORTHO05D014428 9.2e-07 59.3 323 26.0
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 9.2e-07 59.3 264 27.7
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 9.2e-07 59.3 385 24.2
SGA_v2.0_scaffold83G26387 Striga asiatica HOM05D000650 ORTHO05D000735 9.2e-07 59.3 161 29.2
Actinidia01424 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.2e-06 58.9 166 36.7
AUR62032422 Chenopodium quinoa HOM05D016866 ORTHO05D003816 1.2e-06 58.9 244 27.0
SGA_v2.0_scaffold12G06013 Striga asiatica HOM05D003426 ORTHO05D003816 1.2e-06 58.9 80 38.8
CDE05G1528 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 1.6e-06 58.5 259 27.0
Phvul.010G050200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 1.6e-06 58.5 245 28.2
QL02p093555 Quercus lobata HOM05D003426 ORTHO05D003816 1.6e-06 58.5 100 43.0
QL11p025811 Quercus lobata HOM05D000650 ORTHO05D007302 2.0e-06 58.2 138 29.7
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 2.7e-06 57.8 79 43.0
PGSC0003DMG400011188 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.7e-06 57.8 53 62.3
Gohir.A03G178000 Gossypium hirsutum HOM05D000650 ORTHO05D007302 3.5e-06 57.4 187 26.2
Psat6g228520 Pisum sativum HOM05D003426 ORTHO05D003816 3.5e-06 57.4 61 50.8
Haze_10696 Corylus avellana HOM05D000650 ORTHO05D007302 4.5e-06 57.0 168 32.1
Os06g0651300 Oryza sativa ssp. japonica HOM05D003426 ORTHO05D003816 4.5e-06 57.0 195 27.7
TWI14G0488 Tripterygium wilfordii HOM05D000650 ORTHO05D007302 4.5e-06 57.0 155 31.0
QL02p018764 Quercus lobata HOM05D003426 ORTHO05D003816 5.9e-06 56.6 194 24.7
TPR.G30873 Trifolium pratense HOM05D000650 ORTHO05D010020 5.9e-06 56.6 92 38.0
AUR62024799 Chenopodium quinoa HOM05D016866 ORTHO05D003816 7.8e-06 56.2 488 25.8
Duzib132G0086 Durio zibethinus HOM05D000650 ORTHO05D007302 7.8e-06 56.2 149 26.8


User provided reference genes

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