Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 8.9e-102 373.6 192 100.0
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 4.5e-69 265.0 193 71.0
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 1.3e-68 263.5 183 73.8
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 6.9e-54 214.5 188 59.0
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 1.2e-50 203.8 183 57.9
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 3.0e-49 199.1 179 55.9
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 3.3e-48 195.7 182 57.1
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 5.7e-48 194.9 182 56.6
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 9.7e-48 194.1 182 56.6
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 2.8e-47 192.6 183 54.1
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 1.1e-46 190.7 185 53.5
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 2.0e-45 186.4 164 52.4
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.0e-45 186.4 210 50.5
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 7.7e-45 184.5 151 60.3
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 1.7e-44 183.3 164 57.9
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 1.7e-44 183.3 187 51.9
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 1.7e-44 183.3 163 56.4
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 2.2e-44 183.0 162 59.3
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 2.2e-44 183.0 164 57.3
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 2.2e-44 183.0 186 53.8
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 3.8e-44 182.2 183 54.1
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 6.5e-44 181.4 183 52.5
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 8.5e-44 181.0 164 57.3
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 1.9e-43 179.9 188 53.7
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 1.9e-43 179.9 186 52.7
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 3.2e-43 179.1 185 53.0
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 4.2e-43 178.7 165 57.6
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 7.2e-43 177.9 177 54.2
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 9.4e-43 177.6 182 54.4
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 1.2e-42 177.2 181 52.5
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 3.6e-42 175.6 183 53.6
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 4.7e-42 175.3 173 56.1
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 1.0e-41 174.1 183 52.5
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 1.4e-41 173.7 153 57.5
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 1.4e-41 173.7 166 54.8
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 2.3e-41 172.9 183 50.3
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 3.0e-41 172.6 183 50.8
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 3.0e-41 172.6 183 50.8
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 5.2e-41 171.8 177 51.4
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 6.7e-41 171.4 177 52.0
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 6.7e-41 171.4 182 51.1
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 8.8e-41 171.0 187 50.8
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.1e-40 170.6 188 51.6
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 1.1e-40 170.6 176 54.0
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 1.5e-40 170.2 155 52.3
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 2.0e-40 169.9 168 54.2
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 7.4e-40 167.9 181 50.3
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 7.4e-40 167.9 188 50.0
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 9.7e-40 167.5 177 51.4
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 2.2e-39 166.4 161 54.0
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 6.3e-39 164.9 154 53.2
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 6.3e-39 164.9 183 51.4
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 6.3e-39 164.9 177 50.8
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 8.2e-39 164.5 138 56.5
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 1.1e-38 164.1 137 61.3
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 1.8e-38 163.3 170 50.0
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 4.1e-38 162.2 162 49.4
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 9.1e-38 161.0 166 48.2
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 9.1e-38 161.0 183 49.2
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 9.1e-38 161.0 178 50.6
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 1.2e-37 160.6 162 54.9
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 1.2e-37 160.6 146 58.9
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 3.5e-37 159.1 179 45.8
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 3.5e-37 159.1 171 47.4
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 3.5e-37 159.1 129 58.9
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 5.9e-37 158.3 151 57.0
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 7.7e-37 157.9 146 57.5
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 1.7e-36 156.8 191 45.5
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 1.7e-36 156.8 146 57.5
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 2.9e-36 156.0 151 55.6
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 5.0e-36 155.2 162 49.4
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 5.0e-36 155.2 151 53.0
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 8.5e-36 154.5 147 56.5
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 8.5e-36 154.5 166 47.0
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 8.5e-36 154.5 166 47.0
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 1.1e-35 154.1 159 50.3
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 1.1e-35 154.1 167 48.5
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 1.5e-35 153.7 171 46.8
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 1.9e-35 153.3 157 54.1
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 3.2e-35 152.5 166 48.2
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 3.2e-35 152.5 155 51.6
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 3.2e-35 152.5 191 44.5
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 4.2e-35 152.1 156 48.1
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 4.2e-35 152.1 154 47.4
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 5.5e-35 151.8 156 48.1
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 5.5e-35 151.8 156 48.1
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 7.2e-35 151.4 156 48.1
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 7.2e-35 151.4 151 54.3
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.2e-34 150.6 178 43.8
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 1.6e-34 150.2 160 46.2
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 8.0e-34 147.9 167 47.9
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 1.0e-33 147.5 145 53.1
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 4.0e-33 145.6 169 49.1
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 5.2e-33 145.2 156 46.2
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 5.2e-33 145.2 156 46.2
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 4.4e-32 142.1 184 42.4
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 3.1e-30 136.0 122 55.7
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 5.3e-30 135.2 159 47.8
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 7.0e-30 134.8 116 56.9
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 1.2e-29 134.0 163 47.9
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 2.7e-29 132.9 120 56.7
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 1.9e-27 126.7 170 43.5
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.2e-26 124.0 140 50.0
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 2.7e-26 122.9 176 38.1
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.0e-25 120.9 117 49.6
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 6.3e-23 111.7 107 52.3
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 2.5e-19 99.8 76 60.5
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 6.8e-17 91.7 74 54.1
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 3.8e-12 75.9 127 36.2
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 6.1e-10 68.6 70 48.6
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 1.0e-09 67.8 135 34.1
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 3.1e-09 66.2 62 54.8


User provided reference genes

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