Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 7.9e-256 886.7 485 100.0
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 1.5e-150 537.0 517 60.3
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 1.6e-123 447.2 498 54.6
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 1.9e-108 397.1 536 47.6
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 1.7e-104 384.0 538 45.5
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 4.9e-104 382.5 545 44.0
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 5.4e-103 379.0 534 46.4
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 5.9e-102 375.6 498 48.6
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 5.9e-102 375.6 522 47.1
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 1.7e-101 374.0 543 44.4
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 1.9e-100 370.5 528 44.1
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 1.2e-99 367.9 545 44.8
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 1.0e-98 364.8 508 44.7
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 2.3e-98 363.6 498 45.6
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 3.7e-96 356.3 522 45.0
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 3.7e-96 356.3 517 43.1
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 4.9e-96 355.9 531 45.2
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 4.1e-95 352.8 530 43.0
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 4.1e-95 352.8 523 44.7
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 4.6e-94 349.4 513 43.3
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 6.0e-94 349.0 500 45.0
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 6.0e-94 349.0 516 44.6
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 3.9e-93 346.3 517 44.7
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.5e-92 344.4 500 44.6
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 3.3e-92 343.2 500 44.6
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 2.1e-91 340.5 511 42.1
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 4.7e-91 339.3 494 43.3
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 2.3e-90 337.0 512 44.1
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 5.2e-90 335.9 498 46.8
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 8.9e-90 335.1 530 41.1
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 3.4e-89 333.2 496 44.0
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 3.4e-89 333.2 504 45.6
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 4.4e-89 332.8 515 44.7
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 5.8e-89 332.4 504 45.6
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 1.7e-88 330.9 523 41.3
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 6.4e-88 328.9 523 40.7
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 6.4e-88 328.9 513 42.7
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 2.4e-87 327.0 550 39.6
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 4.6e-86 322.8 496 42.7
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 7.8e-86 322.0 523 39.8
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 1.3e-85 321.2 500 42.6
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.7e-85 320.9 505 42.4
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 4.3e-84 316.2 500 41.2
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 1.1e-82 311.6 493 44.4
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 1.1e-82 311.6 508 40.2
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 2.3e-82 310.5 515 40.0
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 6.8e-82 308.9 516 40.7
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 9.9e-81 305.1 489 41.3
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 4.9e-80 302.8 496 40.7
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 4.1e-79 299.7 539 36.4
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 5.1e-77 292.7 462 43.7
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 4.3e-76 289.7 506 39.1
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 1.2e-75 288.1 496 39.5
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 1.2e-75 288.1 516 39.5
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 8.1e-75 285.4 520 36.2
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 8.9e-74 282.0 505 39.8
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 4.4e-73 279.6 507 37.9
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 1.7e-72 277.7 517 36.8
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 9.2e-71 271.9 451 41.2
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 7.8e-70 268.9 493 36.7
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 1.3e-69 268.1 540 37.0
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 3.0e-69 266.9 468 40.0
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 5.1e-69 266.2 416 39.9
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 4.7e-67 259.6 463 41.7
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 1.4e-66 258.1 428 40.9
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 1.4e-66 258.1 436 42.0
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 2.4e-66 257.3 498 38.6
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 2.4e-66 257.3 498 38.6
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 5.3e-66 256.1 489 36.0
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 7.8e-62 242.3 491 37.1
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 6.6e-61 239.2 468 38.0
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 2.5e-60 237.3 504 37.1
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 2.5e-60 237.3 600 30.3
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 2.2e-56 224.2 278 52.2
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 1.9e-55 221.1 258 50.0
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 3.2e-55 220.3 261 47.9
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 3.5e-54 216.9 264 46.6
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 4.3e-52 209.9 405 38.0
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 1.3e-51 208.4 269 45.0
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 2.1e-51 207.6 282 44.0
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 6.2e-51 206.1 417 36.9
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 1.4e-50 204.9 392 37.0
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 1.4e-50 204.9 408 34.1
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 2.4e-50 204.1 291 43.3
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 5.3e-50 203.0 406 38.9
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 1.5e-49 201.4 337 40.1
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 2.6e-49 200.7 368 39.4
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 5.8e-49 199.5 264 44.7
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 2.5e-47 194.1 284 41.5
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 7.1e-47 192.6 248 46.0
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 1.8e-42 177.9 137 67.2
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 2.2e-40 171.0 609 25.5
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 2.2e-40 171.0 593 26.3
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 1.5e-33 148.3 303 38.6
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 1.3e-32 145.2 303 38.0
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 1.4e-31 141.7 249 35.3
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 1.4e-29 135.2 190 41.6
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 2.1e-22 111.3 296 31.8
HPP92_017877 Vanilla planifolia HOM05D007278 ORTHO05D009280 3.9e-21 107.1 129 43.4
QL08p003251 Quercus lobata HOM05D007278 ORTHO05D009280 3.7e-19 100.5 87 56.3
SEGI_34890 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 2.7e-14 84.3 86 41.9
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 1.1e-10 72.4 80 46.2
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 1.6e-09 68.6 65 50.8
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 5.9e-09 66.6 75 52.0
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 1.1e-07 62.4 75 53.3
HPP92_017878 Vanilla planifolia HOM05D007278 ORTHO05D009280 3.6e-06 57.4 54 55.6


User provided reference genes

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