Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1993 Erigeron canadensis HOM05D007616 ORTHO05D008751 3.9e-101 371.7 220 100.0
HanXRQChr06g0181301 Helianthus annuus HOM05D007616 ORTHO05D008751 2.6e-65 252.7 215 68.4
Lsat_1_v5_gn_7_76421 Lactuca sativa HOM05D007616 ORTHO05D008751 4.5e-41 172.2 218 53.2
Lsat_1_v5_gn_9_120740 Lactuca sativa HOM05D007616 ORTHO05D008751 1.4e-34 150.6 222 55.4
Oeu000131.1 Olea europaea HOM05D007616 ORTHO05D008751 7.0e-34 148.3 221 48.9
Sopen01g046110 Solanum pennellii HOM05D007616 ORTHO05D008751 1.6e-33 147.1 227 48.5
Solyc01g103700.3 Solanum lycopersicum HOM05D007616 ORTHO05D008751 2.7e-33 146.4 233 47.6
Nitab4.5_0002596g0080 Nicotiana tabacum HOM05D007616 ORTHO05D008751 7.7e-33 144.8 267 43.1
Nitab4.5_0000948g0040 Nicotiana tabacum HOM05D007616 ORTHO05D008751 3.8e-32 142.5 263 42.6
PGSC0003DMG400024897 Solanum tuberosum HOM05D007616 ORTHO05D008751 1.1e-31 141.0 249 44.2
Potri.003G009400 Populus trichocarpa HOM05D007616 ORTHO05D008751 4.2e-31 139.0 243 43.6
Peaxi162Scf00011g00934 Petunia axillaris HOM05D007616 ORTHO05D008751 9.5e-31 137.9 259 42.9
DCAR_025356 Daucus carota HOM05D007616 ORTHO05D008751 2.1e-30 136.7 239 44.8
Potri.004G222800 Populus trichocarpa HOM05D007616 ORTHO05D008751 4.7e-30 135.6 247 42.1
FvH4_6g51930 Fragaria vesca HOM05D007616 ORTHO05D008751 1.4e-29 134.0 241 43.2
FAN14G2995 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.4e-29 134.0 241 43.2
CiPaw.05G005800 Carya illinoinensis HOM05D007616 ORTHO05D008751 1.8e-29 133.7 230 44.8
FAN09G2205 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.2e-28 131.0 261 42.9
MSTRG.20315 Avicennia marina HOM05D007616 ORTHO05D008751 1.7e-27 127.1 243 45.3
Gohir.A01G182700 Gossypium hirsutum HOM05D007616 ORTHO05D008751 2.8e-27 126.3 253 41.5
QL02p100178 Quercus lobata HOM05D007616 ORTHO05D008751 2.8e-27 126.3 268 39.2
MELO3C011824.2 Cucumis melo HOM05D007616 ORTHO05D008751 8.3e-27 124.8 135 58.5
Atru.chr4.2705 Acer truncatum HOM05D007616 ORTHO05D008751 1.1e-26 124.4 156 58.3
Gohir.D01G173800 Gossypium hirsutum HOM05D007616 ORTHO05D008751 1.1e-26 124.4 253 41.5
Gorai.002G215900 Gossypium raimondii HOM05D007616 ORTHO05D008751 1.1e-26 124.4 253 41.5
Migut.B00786 Erythranthe guttata HOM05D007616 ORTHO05D008751 1.4e-26 124.0 244 41.4
Sabra03G0004800 Salix brachista HOM05D007616 ORTHO05D008751 2.4e-26 123.2 236 43.2
Medtr2g005910 Medicago truncatula HOM05D007616 ORTHO05D008751 5.4e-26 122.1 162 50.6
COL.COLO4_17740 Corchorus olitorius HOM05D007616 ORTHO05D008751 7.0e-26 121.7 147 55.1
RcHm_v2.0_Chr2g0173411 Rosa chinensis HOM05D007616 ORTHO05D008751 7.0e-26 121.7 260 41.2
CSS0006253 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 1.2e-25 120.9 233 44.2
CSS0021835 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 1.6e-25 120.6 233 44.2
Thecc.02G023400 Theobroma cacao HOM05D007616 ORTHO05D008751 3.5e-25 119.4 145 57.9
Ca_00046_v3 Cicer arietinum L. HOM05D001654 ORTHO05D002773 4.5e-25 119.0 152 52.0
Oeu058636.1 Olea europaea HOM05D007616 ORTHO05D008751 5.9e-25 118.6 221 41.6
Duzib132G0975 Durio zibethinus HOM05D007616 ORTHO05D008751 1.0e-24 117.9 146 54.8
Duzib248G0210 Durio zibethinus HOM05D007616 ORTHO05D008751 1.3e-24 117.5 144 55.6
Eucgr.I02753 Eucalyptus grandis HOM05D007616 ORTHO05D008751 1.3e-24 117.5 241 40.7
Glyma.12G167600 Glycine max HOM05D007616 ORTHO05D008751 1.7e-24 117.1 222 42.8
Prupe.1G577200 Prunus persica HOM05D007616 ORTHO05D008751 2.3e-24 116.7 236 39.4
Psat1g223480 Pisum sativum HOM05D007616 ORTHO05D008751 1.5e-23 114.0 252 39.3
ECA240G3878 Erigeron canadensis HOM05D007616 ORTHO05D008751 2.5e-23 113.2 229 42.8
arahy.Tifrunner.gnm1.ann1.4HSG2Y Arachis hypogaea HOM05D007616 ORTHO05D008751 3.3e-23 112.8 151 51.7
Phvul.006G218400 Phaseolus vulgaris HOM05D007616 ORTHO05D008751 5.6e-23 112.1 221 40.7
Manes.07G023000 Manihot esculenta HOM05D007616 ORTHO05D008751 7.3e-23 111.7 154 49.4
ClCG11G013320 Citrullus lanatus HOM05D007616 ORTHO05D008751 9.5e-23 111.3 209 42.6
Cc02_g23010 Coffea canephora HOM05D007616 ORTHO05D008751 9.5e-23 111.3 246 37.8
Lalb_Chr18g0061041 Lupinus albus HOM05D007616 ORTHO05D008751 9.5e-23 111.3 245 37.6
arahy.Tifrunner.gnm1.ann1.D7HVAZ Arachis hypogaea HOM05D007616 ORTHO05D008751 1.2e-22 110.9 245 40.0
Manes.10G119800 Manihot esculenta HOM05D007616 ORTHO05D008751 1.2e-22 110.9 228 40.4
CANSAT54G0672 Cannabis sativa HOM05D007616 ORTHO05D008751 1.6e-22 110.5 213 39.9
Actinidia06472 Actinidia chinensis HOM05D007616 ORTHO05D008751 2.1e-22 110.2 203 44.8
CiPaw.06G173100 Carya illinoinensis HOM05D007616 ORTHO05D008751 2.1e-22 110.2 210 43.3
PSO170G4229 Papaver somniferum HOM05D007616 ORTHO05D008751 2.1e-22 110.2 249 38.2
Sed0008181 Sechium edule HOM05D007616 ORTHO05D008751 4.7e-22 109.0 204 44.6
Sabra01G0168700 Salix brachista HOM05D007616 ORTHO05D008751 1.0e-21 107.8 247 38.9
SGA_v2.0_scaffold272G46374 Striga asiatica HOM05D007616 ORTHO05D008751 2.3e-21 106.7 206 41.3
CAN.G798.53 Capsicum annuum HOM05D007616 ORTHO05D008751 4.0e-21 105.9 244 38.5
MD08G1240500 Malus domestica HOM05D007616 ORTHO05D008751 5.2e-21 105.5 158 49.4
PSO782G2099 Papaver somniferum HOM05D007616 ORTHO05D008751 5.2e-21 105.5 251 36.3
MD15G1433700 Malus domestica HOM05D007616 ORTHO05D008751 2.6e-20 103.2 259 36.3
Nn5g27765 Nelumbo nucifera HOM05D007616 ORTHO05D008751 3.4e-20 102.8 224 43.8
HPP92_005665 Vanilla planifolia HOM05D007616 ORTHO05D008751 1.7e-19 100.5 234 36.3
TPR.G2142 Trifolium pratense HOM05D007616 ORTHO05D008751 2.2e-19 100.1 250 35.6
Rhsim05G0186200 Rhododendron simsii HOM05D007616 ORTHO05D008751 2.9e-19 99.8 223 39.0
CsaV3_5G029830 Cucumis sativus L. HOM05D001654 ORTHO05D002773 8.3e-19 98.2 134 50.7
VMungo0540G1916 Vigna mungo HOM05D007616 ORTHO05D008751 8.3e-19 98.2 202 40.6
Lj6g0028114 Lotus japonicus HOM05D007616 ORTHO05D008751 3.5e-17 92.8 186 41.9
Aqoxy6G00124 Aquilegia oxysepala HOM05D007616 ORTHO05D008751 2.3e-16 90.1 229 38.4
PGR142G0501 Punica granatum HOM05D007616 ORTHO05D008751 2.5e-15 86.7 269 31.2
THA.LOC104816807 Tarenaya hassleriana HOM05D007616 ORTHO05D008751 5.6e-15 85.5 179 41.9
ATR0090G002 Amborella trichopoda HOM05D007616 ORTHO05D008751 9.5e-15 84.7 132 47.7
AUR62034500 Chenopodium quinoa HOM05D007616 ORTHO05D008751 6.2e-14 82.0 230 35.7
Cfa004508 Carpinus fangiana HOM05D007616 ORTHO05D008751 1.0e-13 81.3 107 51.4
Potri.019G021000 Populus trichocarpa HOM05D007616 ORTHO05D008751 1.0e-13 81.3 224 33.9
AL2G17970 Arabidopsis lyrata HOM05D012662 ORTHO05D008751 1.8e-13 80.5 178 42.7
AUR62037671 Chenopodium quinoa HOM05D002239 ORTHO05D002408 1.8e-13 80.5 230 33.9
Sc20g0001190 Simmondsia chinensis HOM05D007616 ORTHO05D008751 3.1e-13 79.7 138 46.4
Haze_10065 Corylus avellana HOM05D001654 ORTHO05D002773 5.2e-13 79.0 103 49.5
TWI14G0953 Tripterygium wilfordii HOM05D007616 ORTHO05D008751 4.9e-11 72.4 224 31.2
vmacro19869 Vaccinium macrocarpon HOM05D007616 ORTHO05D008751 6.4e-11 72.0 221 33.5
Dinv07475 Davidia involucrata HOM05D001654 ORTHO05D002773 2.4e-10 70.1 103 49.5
BcaC02g10705 Brassica carinata HOM05D007616 ORTHO05D008751 4.1e-10 69.3 137 39.4
SalBow3G1194 Salvia bowleyana HOM05D007616 ORTHO05D008751 5.4e-10 68.9 207 33.8
C01p35720 Brassica napus HOM05D007616 ORTHO05D008751 3.5e-09 66.2 160 41.2
BolC1t03530H Brassica oleracea HOM05D007616 ORTHO05D008751 3.5e-09 66.2 160 41.2
QL11p039511 Quercus lobata HOM05D007616 ORTHO05D008751 1.0e-08 64.7 50 62.0
FAN05G5322 Fragaria x ananassa HOM05D007616 ORTHO05D008751 2.3e-08 63.5 115 47.8
Ah.06g187740 Amaranthus hybridus HOM05D007616 ORTHO05D008751 5.0e-08 62.4 47 74.5
Hma1.2p1_0427F.1_g150730 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 8.6e-08 61.6 127 49.6
Os11g0195800 Oryza sativa ssp. japonica HOM05D007616 ORTHO05D008751 1.9e-07 60.5 196 30.6
unitig_21.g20913 Utricularia gibba HOM05D007616 ORTHO05D008751 3.3e-07 59.7 191 30.9
Rhsim05G0130500 Rhododendron simsii HOM05D007616 ORTHO05D008751 7.3e-07 58.5 74 58.1
AUR62029460 Chenopodium quinoa HOM05D002661 ORTHO05D002786 1.6e-06 57.4 94 38.3
Nn1g08457 Nelumbo nucifera HOM05D007616 ORTHO05D008751 1.6e-06 57.4 97 40.2
A09p18580 Brassica napus HOM05D012662 ORTHO05D008751 3.6e-06 56.2 158 35.4
AUR62003372 Chenopodium quinoa HOM05D002661 ORTHO05D002786 6.2e-06 55.5 94 37.2
Ciclev10002504m.g Citrus clementina HOM05D002661 ORTHO05D002786 6.2e-06 55.5 197 27.9


User provided reference genes

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