Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 1.4e-165 586.3 300 100.0
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 8.4e-147 523.9 282 89.7
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 6.0e-145 517.7 281 89.0
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.7e-128 463.0 282 78.7
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 3.9e-128 461.8 282 78.7
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 6.6e-128 461.1 282 78.4
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 1.5e-127 459.9 282 77.7
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 1.3e-126 456.8 281 76.9
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 2.1e-126 456.1 282 76.6
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 2.8e-126 455.7 282 76.2
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 1.1e-125 453.8 282 75.9
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 1.4e-125 453.4 282 77.7
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 4.0e-125 451.8 282 75.5
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 1.2e-124 450.3 281 74.7
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 2.0e-124 449.5 281 76.5
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 7.6e-124 447.6 282 73.8
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 9.9e-124 447.2 270 79.3
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 9.9e-124 447.2 282 73.8
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 1.3e-123 446.8 288 75.0
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 1.3e-123 446.8 281 75.1
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 1.7e-123 446.4 282 75.5
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 1.7e-123 446.4 282 73.4
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 2.2e-123 446.0 281 74.7
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 2.9e-123 445.7 282 75.2
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 2.9e-123 445.7 282 73.4
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 4.9e-123 444.9 281 74.7
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 8.4e-123 444.1 282 73.0
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 8.4e-123 444.1 282 74.1
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.1e-122 443.7 282 73.0
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 3.2e-122 442.2 281 73.7
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 5.5e-122 441.4 282 73.4
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 9.3e-122 440.7 283 73.1
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 1.2e-121 440.3 282 73.4
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 1.2e-121 440.3 281 73.3
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 2.1e-121 439.5 282 73.4
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 2.7e-121 439.1 282 73.4
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 2.7e-121 439.1 281 73.3
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 3.5e-121 438.7 283 73.1
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.0e-120 437.2 282 72.0
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 1.8e-120 436.4 282 72.3
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 3.9e-120 435.3 282 73.0
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 5.1e-120 434.9 281 72.2
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 8.7e-120 434.1 295 71.2
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 1.1e-119 433.7 277 73.6
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 1.1e-119 433.7 281 73.0
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 1.5e-119 433.3 282 72.3
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 2.5e-119 432.6 282 71.3
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 4.3e-119 431.8 283 71.7
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 5.6e-119 431.4 282 71.6
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 7.4e-119 431.0 308 70.1
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 1.3e-118 430.3 282 69.9
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 4.8e-118 428.3 279 73.5
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 6.2e-118 427.9 282 73.0
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 8.1e-118 427.6 281 69.4
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 3.1e-117 425.6 283 70.3
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 6.9e-117 424.5 283 70.7
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 9.0e-117 424.1 282 72.3
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 9.0e-117 424.1 282 72.3
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 9.0e-117 424.1 283 71.7
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 1.2e-116 423.7 281 69.0
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 1.5e-116 423.3 283 69.6
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 1.5e-116 423.3 283 69.6
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 2.6e-116 422.5 281 68.3
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 2.6e-116 422.5 282 68.4
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 3.4e-116 422.2 282 72.0
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 3.4e-116 422.2 282 72.0
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 5.8e-116 421.4 283 71.7
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 5.8e-116 421.4 282 69.9
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 1.3e-115 420.2 270 73.7
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 1.7e-115 419.9 282 70.6
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.7e-115 419.9 277 71.8
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 2.2e-115 419.5 282 69.1
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 2.2e-115 419.5 269 74.7
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 4.9e-115 418.3 282 69.5
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 6.5e-115 417.9 270 73.3
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 6.5e-115 417.9 270 73.3
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 1.4e-114 416.8 283 68.6
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 4.2e-114 415.2 282 69.9
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 4.2e-114 415.2 282 69.5
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 5.5e-114 414.8 281 68.7
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 2.1e-113 412.9 281 68.7
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 7.9e-113 411.0 283 67.8
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 3.9e-112 408.7 324 61.1
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 1.1e-111 407.1 273 70.0
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 4.3e-111 405.2 269 68.8
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 2.1e-110 402.9 281 68.3
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 4.5e-108 395.2 280 66.1
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 6.5e-107 391.3 280 64.3
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 2.7e-105 386.0 265 69.1
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 1.0e-104 384.0 278 64.4
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.0e-104 384.0 260 70.8
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 1.3e-104 383.6 247 72.1
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 1.1e-101 374.0 284 62.0
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 2.4e-101 372.9 283 63.3
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 1.7e-99 366.7 281 62.3
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 1.1e-98 364.0 245 67.3
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 1.4e-96 357.1 239 71.1
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.7e-94 350.1 210 77.1
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 1.7e-83 313.5 275 56.0
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 6.3e-70 268.5 262 49.2
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 1.8e-69 266.9 172 73.8
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 2.7e-68 263.1 267 49.1
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 9.8e-63 244.6 254 46.9
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.8e-61 240.4 259 45.9
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 8.9e-48 194.9 107 86.0
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 1.9e-45 187.2 254 41.3
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 7.0e-45 185.3 153 58.2
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 6.8e-40 168.7 301 39.2
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 3.3e-34 149.8 195 44.6
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 5.6e-34 149.1 103 68.9
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 1.4e-32 144.4 96 65.6
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 2.3e-32 143.7 134 54.5
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 2.9e-30 136.7 87 70.1
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 8.4e-30 135.2 74 83.8
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 4.1e-29 132.9 95 63.2
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 3.0e-19 100.1 73 64.4
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 3.9e-19 99.8 65 67.7
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 4.5e-07 59.7 39 76.9


User provided reference genes

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