Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 4.8e-188 661.0 331 100.0
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 2.9e-100 369.4 354 61.3
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 2.5e-99 366.3 369 58.5
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 3.2e-59 233.0 326 44.5
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 1.2e-58 231.1 336 43.5
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 6.1e-58 228.8 320 42.8
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 8.0e-58 228.4 337 43.3
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.8e-57 227.3 356 41.0
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 2.3e-57 226.9 344 42.4
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 2.3e-57 226.9 333 43.5
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 3.0e-57 226.5 357 42.6
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 5.2e-57 225.7 339 43.4
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 5.2e-57 225.7 325 42.5
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 3.4e-56 223.0 338 42.3
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 3.4e-56 223.0 338 43.2
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 3.4e-56 223.0 326 40.8
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 7.5e-56 221.9 367 41.7
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 7.5e-56 221.9 367 41.4
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 9.8e-56 221.5 327 42.5
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 2.2e-55 220.3 223 53.8
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 2.8e-55 219.9 339 42.8
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 2.8e-55 219.9 326 40.5
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 2.8e-55 219.9 322 43.5
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 3.7e-55 219.5 315 41.9
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 6.3e-55 218.8 302 44.0
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.4e-54 217.6 313 43.5
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 1.4e-54 217.6 199 56.3
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 3.1e-54 216.5 342 41.5
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 4.1e-54 216.1 192 57.3
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 7.0e-54 215.3 359 40.1
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 7.0e-54 215.3 321 43.6
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 2.0e-53 213.8 330 41.8
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 5.9e-53 212.2 214 52.8
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 1.7e-52 210.7 298 43.0
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 2.9e-52 209.9 175 59.4
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 8.6e-52 208.4 384 37.2
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 1.5e-51 207.6 198 55.1
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 1.5e-51 207.6 384 36.5
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 1.9e-51 207.2 328 40.5
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 1.9e-51 207.2 299 42.1
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 2.5e-51 206.8 316 41.5
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 3.3e-51 206.5 333 39.0
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.2e-50 204.5 317 40.7
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 1.6e-50 204.1 246 49.6
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 4.7e-50 202.6 320 43.1
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 6.8e-49 198.7 187 55.1
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 8.9e-49 198.4 342 38.9
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 8.9e-49 198.4 328 38.1
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 8.9e-49 198.4 304 43.4
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 1.2e-48 198.0 206 51.0
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 1.5e-48 197.6 320 37.2
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 2.0e-48 197.2 347 38.6
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 4.4e-48 196.1 314 41.7
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 1.3e-47 194.5 206 51.9
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 1.7e-47 194.1 296 43.9
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 2.9e-47 193.4 262 43.1
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 3.7e-47 193.0 369 37.4
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 6.4e-47 192.2 206 50.5
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 8.3e-47 191.8 187 52.9
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 1.1e-46 191.4 205 50.7
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 1.4e-46 191.0 193 52.3
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 1.8e-46 190.7 209 50.7
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 2.4e-46 190.3 185 52.4
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 3.2e-46 189.9 205 51.2
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 5.4e-46 189.1 167 55.7
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 7.0e-46 188.7 207 49.8
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 9.2e-46 188.3 362 35.9
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 1.2e-45 188.0 239 44.4
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 1.2e-45 188.0 169 53.8
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 2.7e-45 186.8 267 43.4
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 5.9e-45 185.7 205 49.8
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 7.8e-45 185.3 168 53.6
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 7.8e-45 185.3 250 41.6
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 1.3e-44 184.5 205 49.3
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 1.3e-44 184.5 208 49.0
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 1.7e-44 184.1 326 37.1
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 2.3e-44 183.7 255 42.0
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 3.9e-44 183.0 302 39.1
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 6.6e-44 182.2 202 49.0
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 1.1e-43 181.4 208 47.6
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 1.5e-43 181.0 263 41.8
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 1.9e-43 180.6 342 35.7
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 1.9e-43 180.6 180 53.3
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 4.3e-43 179.5 203 47.3
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 4.3e-43 179.5 172 51.2
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 9.5e-43 178.3 210 45.2
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 9.5e-43 178.3 170 51.8
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 1.2e-42 177.9 205 46.3
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 2.8e-42 176.8 182 46.2
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 4.7e-42 176.0 304 36.8
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 1.8e-41 174.1 220 41.4
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 2.6e-40 170.2 336 37.5
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 9.8e-40 168.3 241 39.8
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 6.4e-39 165.6 120 65.8
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 2.0e-37 160.6 241 39.8
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 1.3e-36 157.9 266 38.0
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 8.6e-36 155.2 245 38.8
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 1.4e-33 147.9 191 44.0
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 2.2e-31 140.6 159 42.1
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 1.1e-30 138.3 205 38.5
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 6.8e-25 119.0 126 42.1
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 5.8e-24 115.9 218 31.7
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 7.1e-22 109.0 228 38.2
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 3.0e-20 103.6 231 35.9
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 3.6e-18 96.7 325 25.2
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 3.1e-17 93.6 96 46.9
ECA234G2536 Erigeron canadensis HOM05D006765 ORTHO05D008554 5.2e-17 92.8 49 85.7
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 1.3e-12 78.2 68 44.1
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 6.6e-12 75.9 200 25.0
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 1.5e-08 64.7 217 30.4


User provided reference genes

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