Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 2.1e-103 379.0 189 100.0
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 4.8e-84 314.7 188 82.4
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 1.4e-75 286.6 190 77.4
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 1.9e-59 233.0 194 60.3
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 2.1e-58 229.6 185 60.0
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 4.6e-58 228.4 184 60.9
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 1.0e-57 227.3 181 62.4
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 1.3e-57 226.9 184 60.9
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 1.3e-57 226.9 193 58.5
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 5.1e-57 224.9 178 64.0
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 5.1e-57 224.9 184 60.3
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 1.1e-56 223.8 178 64.0
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 1.5e-56 223.4 193 60.1
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 1.9e-56 223.0 192 59.9
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 3.3e-56 222.2 180 63.3
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 4.3e-56 221.9 185 61.1
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 7.3e-56 221.1 190 58.4
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 9.5e-56 220.7 180 62.8
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 3.6e-55 218.8 189 58.7
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 4.7e-55 218.4 176 60.2
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 6.2e-55 218.0 166 64.5
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 2.3e-54 216.1 175 60.6
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 3.1e-54 215.7 163 65.0
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 4.0e-54 215.3 176 63.1
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 5.2e-54 214.9 163 63.8
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 5.2e-54 214.9 176 63.1
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 5.2e-54 214.9 176 63.1
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 5.2e-54 214.9 188 56.9
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 6.8e-54 214.5 169 63.3
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 1.5e-53 213.4 176 63.1
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 4.4e-53 211.8 190 55.8
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 4.4e-53 211.8 169 62.7
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 4.4e-53 211.8 169 60.9
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 4.4e-53 211.8 188 58.0
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 4.4e-53 211.8 171 61.4
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 7.5e-53 211.1 180 58.3
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 7.5e-53 211.1 179 57.5
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 1.3e-52 210.3 175 58.9
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 2.2e-52 209.5 178 61.2
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 2.2e-52 209.5 175 61.1
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 6.4e-52 208.0 176 59.7
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 6.4e-52 208.0 200 54.5
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 8.3e-52 207.6 193 57.5
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 1.1e-51 207.2 178 60.1
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 1.1e-51 207.2 178 61.2
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 1.9e-51 206.5 173 60.1
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 2.4e-51 206.1 181 59.1
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 4.1e-51 205.3 195 55.9
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 5.4e-51 204.9 171 58.5
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 5.4e-51 204.9 176 62.5
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 1.2e-50 203.8 237 48.5
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 1.6e-50 203.4 180 59.4
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 2.1e-50 203.0 213 51.6
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 2.7e-50 202.6 195 55.4
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 4.6e-50 201.8 181 59.1
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 2.3e-49 199.5 181 58.6
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 3.0e-49 199.1 181 58.6
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 3.9e-49 198.7 172 60.5
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 5.1e-49 198.4 174 55.7
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 6.6e-49 198.0 186 54.3
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 8.6e-49 197.6 193 52.8
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 1.1e-48 197.2 192 55.7
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 2.5e-48 196.1 157 59.9
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 4.3e-48 195.3 190 53.2
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 9.5e-48 194.1 181 54.1
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 1.2e-47 193.7 196 51.5
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 1.6e-47 193.4 190 52.6
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 1.6e-47 193.4 172 54.7
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 6.2e-47 191.4 165 57.6
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 6.2e-47 191.4 177 55.9
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 2.4e-46 189.5 185 54.6
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 2.4e-46 189.5 181 54.7
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 2.0e-45 186.4 177 54.2
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 9.9e-45 184.1 194 51.0
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 2.9e-44 182.6 178 52.8
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 2.9e-44 182.6 180 55.0
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 9.2e-43 177.6 174 55.7
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 1.1e-40 170.6 180 48.9
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 3.3e-40 169.1 176 50.0
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 5.6e-40 168.3 166 56.0
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 9.6e-40 167.5 190 48.9
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 1.1e-38 164.1 164 51.2
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 1.5e-37 160.2 157 52.2
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 2.0e-37 159.8 172 48.3
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 7.6e-37 157.9 192 46.9
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 1.7e-36 156.8 181 48.6
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 1.7e-36 156.8 157 52.9
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 2.9e-36 156.0 189 47.1
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 3.8e-36 155.6 192 46.4
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 3.8e-36 155.6 192 46.4
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 1.1e-35 154.1 189 46.6
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 1.4e-35 153.7 151 51.7
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 1.9e-35 153.3 157 52.2
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 5.4e-35 151.8 172 48.3
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 7.1e-35 151.4 172 48.3
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 6.0e-34 148.3 171 49.1
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 1.7e-33 146.7 159 50.9
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 1.7e-33 146.7 164 47.6
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 1.9e-32 143.3 172 47.7
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 2.5e-32 142.9 172 47.7
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 3.3e-32 142.5 157 49.0
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 7.3e-32 141.4 174 43.7
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 3.6e-31 139.0 173 47.4
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 8.1e-31 137.9 173 46.8
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 8.1e-31 137.9 119 60.5
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 4.5e-29 132.1 98 62.2
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 8.4e-28 127.9 160 45.0
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 8.4e-28 127.9 143 49.7
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 1.6e-26 123.6 127 57.5
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 3.5e-26 122.5 97 59.8
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 2.1e-18 96.7 185 34.6
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 6.7e-17 91.7 166 34.9
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 4.0e-14 82.4 178 30.9
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 4.0e-14 82.4 98 46.9
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 2.6e-13 79.7 201 30.3
ECA233G1316 Erigeron canadensis HOM05D052542 ORTHO05D008391 1.8e-06 57.0 36 75.0
Ca_19566_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 5.3e-06 55.5 67 46.3


User provided reference genes

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