Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.2e-89 333.2 176 100.0
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 8.3e-62 240.7 177 75.1
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 7.0e-61 237.7 176 75.6
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 5.6e-58 228.0 163 76.1
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 2.0e-55 219.5 179 72.1
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 6.6e-51 204.5 166 67.5
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 1.8e-48 196.4 160 66.9
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 2.6e-47 192.6 173 58.4
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 3.4e-47 192.2 166 63.3
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 9.8e-47 190.7 167 60.5
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 1.7e-46 189.9 176 61.4
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 2.2e-46 189.5 167 63.5
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 2.2e-46 189.5 156 65.4
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 2.2e-46 189.5 163 62.0
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 2.9e-46 189.1 148 64.9
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 3.7e-46 188.7 152 64.5
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 4.9e-46 188.3 158 66.5
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 2.4e-45 186.0 149 66.4
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 3.2e-45 185.7 186 58.6
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 7.0e-45 184.5 163 62.0
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 7.0e-45 184.5 165 63.0
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 9.2e-45 184.1 162 63.6
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 9.2e-45 184.1 165 63.0
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 9.2e-45 184.1 163 61.3
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 1.2e-44 183.7 158 58.9
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 1.6e-44 183.3 143 68.5
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 3.5e-44 182.2 159 60.4
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 6.0e-44 181.4 145 63.4
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 1.7e-43 179.9 165 60.6
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 2.3e-43 179.5 148 62.8
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 3.9e-43 178.7 175 58.3
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 8.6e-43 177.6 166 60.2
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 2.5e-42 176.0 166 59.6
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.5e-42 176.0 148 62.8
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 2.5e-42 176.0 163 58.3
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 3.3e-42 175.6 176 58.0
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.3e-42 175.6 148 62.8
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 3.3e-42 175.6 167 57.5
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 5.6e-42 174.9 162 61.1
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 7.3e-42 174.5 162 61.1
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 2.1e-41 172.9 172 59.3
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 2.8e-41 172.6 177 57.6
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 4.7e-41 171.8 159 57.9
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 4.7e-41 171.8 171 57.3
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 1.1e-40 170.6 161 58.4
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 2.3e-40 169.5 165 60.0
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 2.3e-40 169.5 161 59.0
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 5.2e-40 168.3 164 60.4
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 1.2e-39 167.2 133 67.7
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 1.5e-39 166.8 161 58.4
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 1.5e-39 166.8 164 58.5
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 2.0e-39 166.4 164 57.9
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 2.0e-39 166.4 187 51.9
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 3.4e-39 165.6 155 55.5
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 4.4e-39 165.2 176 56.2
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 4.4e-39 165.2 180 55.0
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 5.8e-39 164.9 188 53.2
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.3e-38 163.7 158 57.0
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 2.9e-38 162.5 149 59.1
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 2.9e-38 162.5 161 56.5
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 8.3e-38 161.0 162 56.8
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.1e-37 160.6 164 54.9
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 1.4e-37 160.2 163 54.6
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.4e-37 160.2 162 58.6
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 2.4e-37 159.5 167 57.5
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 2.4e-37 159.5 163 56.4
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 3.2e-37 159.1 163 55.8
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 5.4e-37 158.3 171 57.3
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 5.4e-37 158.3 143 59.4
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 7.1e-37 157.9 159 56.0
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 2.1e-36 156.4 162 55.6
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 2.7e-36 156.0 170 55.9
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 6.0e-36 154.8 167 56.3
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 7.8e-36 154.5 149 55.0
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 1.3e-35 153.7 146 54.8
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 1.3e-35 153.7 163 54.6
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.0e-35 152.5 163 54.0
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 3.0e-35 152.5 155 52.9
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 6.6e-35 151.4 163 55.2
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 8.6e-35 151.0 157 53.5
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 8.6e-35 151.0 162 54.3
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.1e-34 150.6 158 53.2
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 1.5e-34 150.2 172 51.2
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 2.5e-34 149.4 154 51.9
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 2.5e-34 149.4 164 54.3
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 5.6e-34 148.3 164 54.9
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 9.5e-34 147.5 162 53.1
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 1.6e-33 146.7 147 51.7
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 2.1e-33 146.4 163 54.6
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 2.8e-33 146.0 191 48.2
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 6.2e-33 144.8 160 50.0
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 8.1e-33 144.4 174 48.9
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 1.4e-32 143.7 159 49.1
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 3.1e-32 142.5 155 55.5
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 6.8e-32 141.4 141 56.0
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 6.8e-32 141.4 141 56.0
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 2.6e-31 139.4 162 52.5
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 3.4e-31 139.0 161 50.3
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 5.8e-31 138.3 141 54.6
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 1.3e-30 137.1 144 53.5
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 3.8e-30 135.6 148 54.7
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 3.8e-30 135.6 152 51.3
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 1.1e-29 134.0 148 54.1
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 1.4e-29 133.7 163 48.5
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 1.9e-29 133.3 170 50.6
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 5.4e-29 131.7 168 48.2
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 1.2e-28 130.6 164 51.8
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 2.1e-28 129.8 152 49.3
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 2.7e-28 129.4 157 48.4
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 1.0e-27 127.5 149 53.0
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 1.0e-27 127.5 150 52.7
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 1.3e-27 127.1 142 53.5
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 2.3e-27 126.3 142 53.5
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 3.0e-27 125.9 137 50.4
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 3.9e-27 125.6 151 51.0
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 3.9e-27 125.6 151 51.0
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 5.1e-27 125.2 157 47.8
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 1.5e-26 123.6 136 49.3
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 3.3e-26 122.5 162 46.9
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 3.3e-26 122.5 162 46.9
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 3.3e-26 122.5 161 43.5
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 4.3e-26 122.1 163 49.7
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 2.8e-25 119.4 160 43.8
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 3.6e-25 119.0 149 45.0
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 1.1e-24 117.5 145 46.2
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 5.8e-23 111.7 153 47.7
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 7.6e-23 111.3 148 45.3
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 2.2e-22 109.8 163 37.4
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 6.4e-22 108.2 147 43.5
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 8.4e-22 107.8 83 65.1
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 8.4e-22 107.8 83 65.1
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 2.4e-21 106.3 149 42.3
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 7.1e-21 104.8 150 46.0
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 9.3e-21 104.4 133 44.4
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 3.5e-20 102.4 143 44.8
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 3.5e-20 102.4 132 41.7
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 4.6e-20 102.1 125 44.0
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 4.6e-20 102.1 144 47.9
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 1.3e-19 100.5 125 45.6
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 2.3e-19 99.8 75 66.7
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 3.0e-19 99.4 133 42.1
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 6.2e-17 91.7 126 42.9
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 4.0e-16 89.0 154 39.6
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 5.3e-16 88.6 152 42.8
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 6.9e-16 88.2 152 42.8
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 9.0e-16 87.8 160 37.5
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 1.5e-15 87.0 81 53.1
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.4e-15 85.9 152 42.8
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 4.5e-15 85.5 152 42.8
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 4.5e-15 85.5 152 42.8
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 7.6e-15 84.7 92 52.2
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 2.9e-14 82.8 165 40.6
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 6.4e-14 81.6 149 41.6
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 1.2e-12 77.4 92 48.9
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 2.7e-12 76.3 103 48.5
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 7.9e-12 74.7 73 56.2
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 1.0e-11 74.3 90 47.8
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 3.0e-11 72.8 143 30.8
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 3.3e-10 69.3 74 48.6
Peaxi162Scf00585g01023 Petunia axillaris HOM05D004226 ORTHO05D004842 8.1e-09 64.7 52 57.7
Medtr8g011510 Medicago truncatula HOM05D004226 ORTHO05D004842 9.0e-08 61.2 141 32.6
Peaxi162Scf00462g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 7.6e-07 58.2 52 57.7
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 1.3e-06 57.4 68 45.6
Nn7g37876 Nelumbo nucifera HOM05D001231 ORTHO05D001012 3.8e-06 55.8 62 51.6
DCAR_023429 Daucus carota HOM05D057861 ORTHO05D004842 6.4e-06 55.1 141 31.9


User provided reference genes

Program Settings