Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1626 Erigeron canadensis HOM05D007083 ORTHO05D008801 3.7e-98 363.2 177 100.0
Lsat_1_v5_gn_0_45320 Lactuca sativa HOM05D007083 ORTHO05D008801 3.2e-65 253.8 177 68.4
Lsat_1_v5_gn_5_117460 Lactuca sativa HOM05D007083 ORTHO05D008801 3.2e-65 253.8 177 68.4
HanXRQChr12g0374971 Helianthus annuus HOM05D007083 ORTHO05D008801 1.4e-57 228.4 173 64.7
Lj2P412T37 Lonicera japonica HOM05D007083 ORTHO05D008801 5.6e-46 189.9 178 52.2
CSS0008892 Camellia sinensis var. sinensis HOM05D007083 ORTHO05D008801 3.6e-45 187.2 177 49.7
CSS0024065 Camellia sinensis var. sinensis HOM05D007083 ORTHO05D008801 3.6e-45 187.2 177 49.7
Dinv23578 Davidia involucrata HOM05D007083 ORTHO05D008801 6.2e-45 186.4 177 49.2
Rhsim05G0078900 Rhododendron simsii HOM05D007083 ORTHO05D008801 6.8e-44 183.0 177 48.6
PGSC0003DMG400025930 Solanum tuberosum HOM05D007083 ORTHO05D008801 9.9e-43 179.1 177 48.0
CAN.G322.86 Capsicum annuum HOM05D007083 ORTHO05D008801 2.9e-42 177.6 177 49.2
DCAR_003627 Daucus carota HOM05D007083 ORTHO05D008801 8.4e-42 176.0 176 50.0
Sopen01g051260 Solanum pennellii HOM05D007083 ORTHO05D008801 1.4e-41 175.3 177 47.5
Solyc01g109060.4 Solanum lycopersicum HOM05D007083 ORTHO05D008801 3.2e-41 174.1 177 48.0
Nitab4.5_0001401g0200 Nicotiana tabacum HOM05D007083 ORTHO05D008801 2.7e-40 171.0 177 48.6
Thecc.02G028500 Theobroma cacao HOM05D007083 ORTHO05D008801 2.7e-40 171.0 177 45.8
EL10Ac9g21792 Beta vulgaris HOM05D007083 ORTHO05D008801 3.5e-40 170.6 177 48.0
Manes.15G145600 Manihot esculenta HOM05D007083 ORTHO05D008801 4.6e-40 170.2 176 46.6
Gohir.D12G042300 Gossypium hirsutum HOM05D007083 ORTHO05D008801 2.3e-39 167.9 177 45.8
Gorai.008G044300 Gossypium raimondii HOM05D007083 ORTHO05D008801 3.9e-39 167.2 177 45.8
AUR62016660 Chenopodium quinoa HOM05D007083 ORTHO05D008801 8.7e-39 166.0 176 47.2
AUR62011398 Chenopodium quinoa HOM05D007083 ORTHO05D008801 1.1e-38 165.6 176 46.6
Duzib052G0394 Durio zibethinus HOM05D007083 ORTHO05D008801 1.1e-38 165.6 177 44.1
Gohir.A12G030100 Gossypium hirsutum HOM05D007083 ORTHO05D008801 1.9e-38 164.9 177 45.2
QL11p039208 Quercus lobata HOM05D007083 ORTHO05D008801 4.3e-38 163.7 177 48.6
Sabra18G0050700 Salix brachista HOM05D007083 ORTHO05D008801 9.6e-38 162.5 177 42.9
Cc02_g18190 Coffea canephora HOM05D007083 ORTHO05D008801 1.3e-37 162.2 177 44.6
Potri.004G147700 Populus trichocarpa HOM05D007083 ORTHO05D008801 1.6e-37 161.8 177 41.8
GSVIVG01029769001 Vitis vinifera HOM05D007083 ORTHO05D008801 1.6e-37 161.8 177 44.6
Prupe.8G019300 Prunus persica HOM05D007083 ORTHO05D008801 6.2e-37 159.8 177 45.2
Ah.01g019870 Amaranthus hybridus HOM05D007083 ORTHO05D008801 1.4e-36 158.7 174 46.0
MSTRG.5378 Avicennia marina HOM05D007083 ORTHO05D008801 1.8e-36 158.3 177 45.2
PGR042G0769 Punica granatum HOM05D007083 ORTHO05D008801 6.9e-36 156.4 178 44.9
Cpa.g.sc109.26 Carica papaya HOM05D007083 ORTHO05D008801 2.6e-35 154.5 170 45.9
CiPaw.06G139300 Carya illinoinensis HOM05D007083 ORTHO05D008801 3.4e-35 154.1 177 44.1
Haze_02465 Corylus avellana HOM05D007083 ORTHO05D008801 3.4e-35 154.1 168 47.6
Cfa004946 Carpinus fangiana HOM05D007083 ORTHO05D008801 4.4e-35 153.7 171 46.8
Eucgr.J00091 Eucalyptus grandis HOM05D007083 ORTHO05D008801 1.7e-34 151.8 177 43.5
Sc18g0004780 Simmondsia chinensis HOM05D007083 ORTHO05D008801 1.1e-33 149.1 179 43.6
CANSAT25G2501 Cannabis sativa HOM05D007083 ORTHO05D008801 5.4e-33 146.7 177 41.2
arahy.Tifrunner.gnm1.ann1.JD2ZC9 Arachis hypogaea HOM05D007083 ORTHO05D008801 1.2e-32 145.6 178 44.9
Sp3g28900 Schrenkiella parvula HOM05D007083 ORTHO05D008801 1.2e-32 145.6 180 42.2
TAR369G0752 Trochodendron aralioides HOM05D007083 ORTHO05D008801 1.6e-32 145.2 176 40.9
FAN20G1975 Fragaria x ananassa HOM05D007083 ORTHO05D008801 2.7e-32 144.4 177 41.2
Sc18g0004860 Simmondsia chinensis HOM05D007083 ORTHO05D008801 3.5e-32 144.1 179 43.0
AL3G47400 Arabidopsis lyrata HOM05D007083 ORTHO05D008801 4.6e-32 143.7 177 40.7
CARHR106000 Cardamine hirsuta HOM05D007083 ORTHO05D008801 4.6e-32 143.7 172 40.1
AT2G15630 Arabidopsis thaliana HOM05D007083 ORTHO05D008801 1.3e-31 142.1 177 38.4
Ciclev10030406m.g Citrus clementina HOM05D007083 ORTHO05D008801 1.3e-31 142.1 178 41.0
CsaV3_7G010110 Cucumis sativus L. HOM05D007083 ORTHO05D008801 1.7e-31 141.7 160 45.0
VMungo1383G2401 Vigna mungo HOM05D007083 ORTHO05D008801 1.7e-31 141.7 177 41.2
Phvul.001G085800 Phaseolus vulgaris HOM05D007083 ORTHO05D008801 2.3e-31 141.4 179 40.2
Glyma.12G048300 Glycine max HOM05D007083 ORTHO05D008801 8.7e-31 139.4 179 40.2
BcaB03g14591 Brassica carinata HOM05D007083 ORTHO05D008801 1.1e-30 139.0 170 43.5
MELO3C018417.2 Cucumis melo HOM05D007083 ORTHO05D008801 1.1e-30 139.0 160 45.0
Nn7g35939 Nelumbo nucifera HOM05D007083 ORTHO05D008801 2.5e-30 137.9 176 39.8
Sed0019239 Sechium edule HOM05D007083 ORTHO05D008801 5.6e-30 136.7 153 46.4
MBI19_g17433_MAGBIO Magnolia biondii HOM05D007083 ORTHO05D008801 1.3e-29 135.6 176 41.5
TWI31G0787 Tripterygium wilfordii HOM05D007083 ORTHO05D008801 1.3e-29 135.6 162 44.4
Atru.chr5.2875 Acer truncatum HOM05D007083 ORTHO05D008801 1.6e-29 135.2 147 46.9
BcaC06g36074 Brassica carinata HOM05D007083 ORTHO05D008801 2.8e-29 134.4 169 41.4
C07p08180 Brassica napus HOM05D007083 ORTHO05D008801 2.8e-29 134.4 169 41.4
BolC7t41234H Brassica oleracea HOM05D007083 ORTHO05D008801 2.8e-29 134.4 169 41.4
ClCG02G005520 Citrullus lanatus HOM05D007083 ORTHO05D008801 4.8e-29 133.7 149 47.0
Lj3g0002320 Lotus japonicus HOM05D007083 ORTHO05D008801 4.8e-29 133.7 179 40.8
arahy.Tifrunner.gnm1.ann1.CNDX61 Arachis hypogaea HOM05D007083 ORTHO05D008801 6.2e-29 133.3 179 42.5
A07p05120 Brassica napus HOM05D007083 ORTHO05D008801 6.2e-29 133.3 169 40.8
BraA07t28306Z Brassica rapa HOM05D007083 ORTHO05D008801 8.1e-29 132.9 169 40.8
Actinidia17838 Actinidia chinensis HOM05D007083 ORTHO05D008801 4.0e-28 130.6 180 41.1
FAN24G0977 Fragaria x ananassa HOM05D007083 ORTHO05D008801 4.0e-28 130.6 167 39.5
Atru.chr13.1400 Acer truncatum HOM05D007083 ORTHO05D008801 5.3e-28 130.2 163 42.9
FvH4_2g07360 Fragaria vesca HOM05D007083 ORTHO05D008801 9.0e-28 129.4 167 38.9
Potri.009G109001 Populus trichocarpa HOM05D007083 ORTHO05D008801 9.0e-28 129.4 159 39.6
Sabra04G0098000 Salix brachista HOM05D007083 ORTHO05D008801 1.2e-27 129.0 142 41.5
Aa31LG8G13290 Aethionema arabicum HOM05D007083 ORTHO05D008801 4.5e-27 127.1 170 37.6
SalBow3G3241 Salvia bowleyana HOM05D001193 ORTHO05D001016 1.7e-26 125.2 159 39.6
Medtr4g068360 Medicago truncatula HOM05D007083 ORTHO05D008801 9.3e-25 119.4 170 37.6
RcHm_v2.0_Chr6g0259961 Rosa chinensis HOM05D007083 ORTHO05D008801 9.3e-25 119.4 163 38.0
Aqoxy7G03503 Aquilegia oxysepala HOM05D007083 ORTHO05D008801 3.5e-24 117.5 152 39.5
Thhalv10022592m.g Eutrema salsugineum HOM05D007083 ORTHO05D008801 7.9e-24 116.3 175 34.3
QL11p039212 Quercus lobata HOM05D007083 ORTHO05D008801 1.3e-23 115.5 177 40.1
SHI08173 Sapria himalayana HOM05D007083 ORTHO05D008801 3.9e-23 114.0 174 33.3
THA.LOC104819595 Tarenaya hassleriana HOM05D007083 ORTHO05D008801 6.7e-23 113.2 167 38.9
Ca_20820_v3 Cicer arietinum L. HOM05D007083 ORTHO05D008801 4.3e-22 110.5 179 35.8
Glyma.11G123700 Glycine max HOM05D007083 ORTHO05D008801 7.4e-22 109.8 175 35.4
ATR0598G052 Amborella trichopoda HOM05D007083 ORTHO05D008801 3.4e-19 100.9 175 30.9
Migut.N01212 Erythranthe guttata HOM05D007083 ORTHO05D008801 3.8e-18 97.4 157 36.9
COL.COLO4_17774 Corchorus olitorius HOM05D007083 ORTHO05D008801 3.2e-17 94.4 153 37.3
HPP92_019625 Vanilla planifolia HOM05D007083 ORTHO05D008801 4.6e-16 90.5 180 30.6
PSO339G4029 Papaver somniferum HOM05D007083 ORTHO05D008801 3.9e-15 87.4 163 33.1
PSO384G4964 Papaver somniferum HOM05D007083 ORTHO05D008801 3.3e-14 84.3 162 32.1
RcHm_v2.0_Chr2g0124591 Rosa chinensis HOM05D007083 ORTHO05D008801 1.7e-10 72.0 68 51.5
SEGI_33147 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 1.6e-08 65.5 151 29.1
SEGI_16669 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 2.1e-08 65.1 180 25.6
TPR.G10240 Trifolium pratense HOM05D007083 ORTHO05D008801 3.5e-08 64.3 70 38.6
ATR1159G005 Amborella trichopoda HOM05D006931 ORTHO05D008782 4.6e-08 63.9 176 28.4
TPR.G8749 Trifolium pratense HOM05D006931 ORTHO05D008782 1.3e-07 62.4 169 29.6
Carub.0003s2940 Capsella rubella HOM05D007083 ORTHO05D008801 3.9e-07 60.8 50 54.0
Lj3g0013378 Lotus japonicus HOM05D006931 ORTHO05D008782 3.9e-07 60.8 170 27.6
Lj3g0024796 Lotus japonicus HOM05D006931 ORTHO05D008782 3.9e-07 60.8 170 27.6
Psat4g195880 Pisum sativum HOM05D006931 ORTHO05D008782 2.5e-06 58.2 171 29.2
Gohir.A04G115700 Gossypium hirsutum HOM05D007083 ORTHO05D008801 3.3e-06 57.8 42 57.1
CsaV3_2G014520 Cucumis sativus L. HOM05D007675 ORTHO05D009699 7.4e-06 56.6 183 25.1


User provided reference genes

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