Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 2.4e-187 658.7 335 100.0
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 7.1e-155 550.8 343 81.6
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 3.8e-148 528.5 337 75.1
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 4.8e-135 485.0 337 68.8
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.5e-133 479.9 341 72.1
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 5.5e-131 471.5 340 66.8
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 6.1e-130 468.0 340 70.0
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 6.1e-130 468.0 340 66.8
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 3.0e-129 465.7 340 66.5
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 3.0e-129 465.7 340 66.2
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 1.8e-126 456.4 340 67.6
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 4.1e-126 455.3 340 66.5
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 4.1e-126 455.3 340 65.3
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 6.9e-126 454.5 340 65.9
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 2.6e-125 452.6 340 67.6
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 4.5e-125 451.8 340 70.3
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 1.0e-124 450.7 343 64.7
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 2.2e-124 449.5 344 66.3
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 5.0e-124 448.4 340 65.9
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 8.5e-124 447.6 340 70.6
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 1.9e-123 446.4 343 65.0
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 2.5e-123 446.0 340 63.5
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 5.5e-123 444.9 340 63.5
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 2.7e-122 442.6 344 67.2
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 4.7e-122 441.8 341 68.3
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.0e-121 440.7 428 57.0
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 1.4e-121 440.3 371 60.9
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 5.2e-121 438.3 342 61.7
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 1.5e-120 436.8 343 63.6
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 3.3e-120 435.6 342 62.0
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 4.4e-120 435.3 340 60.9
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 5.7e-120 434.9 340 61.2
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 5.7e-120 434.9 344 63.1
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 5.7e-120 434.9 340 61.5
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 9.7e-120 434.1 342 62.3
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 2.2e-119 433.0 340 67.1
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 2.8e-119 432.6 340 62.6
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 3.7e-119 432.2 341 60.7
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 3.7e-119 432.2 345 62.0
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 4.8e-119 431.8 340 59.7
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 1.8e-118 429.9 340 66.5
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 1.8e-118 429.9 347 61.4
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 2.4e-118 429.5 341 65.7
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 2.4e-118 429.5 343 62.7
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 2.6e-117 426.0 340 62.6
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 3.5e-117 425.6 348 61.5
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 1.0e-116 424.1 340 58.5
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.3e-116 423.7 344 61.3
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 3.8e-116 422.2 343 65.6
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 6.5e-116 421.4 340 58.5
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 1.1e-115 420.6 341 61.3
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 1.1e-115 420.6 341 61.3
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 2.5e-115 419.5 345 58.6
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 1.2e-114 417.2 339 60.5
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 2.1e-114 416.4 340 65.0
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 4.7e-114 415.2 340 65.3
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 1.0e-113 414.1 341 60.4
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 1.4e-113 413.7 343 61.2
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 1.8e-113 413.3 341 60.7
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 4.0e-113 412.1 393 54.5
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 4.0e-113 412.1 343 60.9
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 5.2e-113 411.8 343 64.4
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 5.2e-113 411.8 343 62.4
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 8.8e-113 411.0 341 65.1
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 8.8e-113 411.0 340 61.5
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 1.2e-112 410.6 343 60.9
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 2.2e-111 406.4 340 59.7
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 4.8e-111 405.2 341 57.5
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 6.3e-111 404.8 340 60.9
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 8.2e-111 404.4 341 64.2
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 3.1e-110 402.5 363 57.0
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 7.0e-110 401.4 341 57.8
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 1.2e-109 400.6 343 58.6
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 2.7e-109 399.4 343 58.9
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 4.5e-109 398.7 343 59.2
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 7.7e-109 397.9 296 67.2
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 1.0e-108 397.5 343 62.1
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 8.5e-108 394.4 342 61.7
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 8.5e-108 394.4 282 68.4
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 3.2e-107 392.5 343 57.7
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 7.2e-107 391.3 343 62.4
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 9.4e-107 391.0 342 63.7
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 6.1e-106 388.3 341 61.0
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 1.8e-105 386.7 342 61.4
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 3.0e-105 386.0 342 62.9
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 1.2e-104 384.0 341 56.9
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 3.4e-104 382.5 340 58.2
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 7.5e-104 381.3 341 60.7
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.7e-103 380.2 343 57.7
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 8.3e-103 377.9 340 55.0
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 8.3e-103 377.9 340 60.9
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 1.1e-102 377.5 340 55.3
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 2.4e-102 376.3 342 62.6
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 3.1e-102 375.9 341 60.1
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 3.1e-102 375.9 340 54.7
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 5.9e-101 371.7 365 57.0
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 5.5e-99 365.2 343 58.0
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 7.2e-99 364.8 263 67.7
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 5.2e-97 358.6 300 57.3
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 8.8e-97 357.8 340 53.8
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 5.7e-96 355.1 346 56.1
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.1e-94 350.9 340 55.0
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.2e-93 347.4 340 54.7
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 7.8e-93 344.7 346 52.3
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 8.6e-92 341.3 348 52.6
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 1.0e-89 334.3 340 52.6
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 6.0e-77 292.0 218 71.6
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 2.8e-74 283.1 216 68.5
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 1.8e-73 280.4 348 48.3
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 8.9e-73 278.1 279 53.8
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 5.8e-72 275.4 201 65.7
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 2.2e-71 273.5 347 45.8
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 4.6e-69 265.8 348 45.7
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 1.2e-64 251.1 348 40.2
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 5.4e-62 242.3 297 42.8
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 1.2e-61 241.1 188 62.2
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 9.9e-56 221.5 153 67.3
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 9.6e-51 204.9 195 56.4
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 3.2e-46 189.9 219 44.7
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 1.1e-43 181.4 172 50.0
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 1.9e-43 180.6 270 40.4
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 7.9e-37 158.7 335 32.8
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 4.2e-30 136.3 122 59.0
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 6.7e-28 129.0 159 50.9
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 9.7e-27 125.2 329 31.0
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 1.0e-15 88.6 77 57.1
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 1.4e-14 84.7 86 54.7
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 3.2e-14 83.6 63 61.9
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-13 80.9 149 33.6
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 5.7e-11 72.8 81 49.4
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-09 68.2 69 46.4
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 2.4e-09 67.4 123 31.7
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 2.2e-07 60.8 68 50.0
arahy.Tifrunner.gnm1.ann1.DS860L Arachis hypogaea HOM05D004669 ORTHO05D005767 8.5e-07 58.9 217 24.0
arahy.Tifrunner.gnm1.ann1.L4R828 Arachis hypogaea HOM05D004669 ORTHO05D005767 8.5e-07 58.9 217 24.0
CSS0009653 Camellia sinensis var. sinensis HOM05D004669 ORTHO05D005767 4.2e-06 56.6 258 21.3


User provided reference genes

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