Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 2.4e-113 412.1 207 100.0
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 2.5e-49 199.5 165 62.4
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 7.2e-49 198.0 170 62.9
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.9e-36 156.8 188 49.5
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 1.6e-35 153.7 208 46.6
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 4.3e-33 145.6 193 46.1
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 5.6e-33 145.2 202 43.1
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 3.1e-31 139.4 206 45.1
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 3.1e-31 139.4 192 44.3
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 4.0e-31 139.0 213 42.3
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 6.8e-31 138.3 215 40.9
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 8.9e-31 137.9 195 45.6
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 8.9e-31 137.9 238 39.1
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 2.0e-30 136.7 197 43.1
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 2.0e-30 136.7 209 39.2
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.6e-30 136.3 209 38.8
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 4.4e-30 135.6 198 43.4
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 7.5e-30 134.8 210 41.0
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 9.8e-30 134.4 180 46.7
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.9e-29 132.9 165 46.1
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 4.9e-29 132.1 178 47.2
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 1.9e-28 130.2 236 40.3
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 7.0e-28 128.3 225 39.6
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 9.2e-28 127.9 225 38.7
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 1.2e-27 127.5 201 41.3
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 4.6e-27 125.6 203 42.4
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 7.8e-27 124.8 222 38.3
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 1.3e-26 124.0 160 45.6
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 1.7e-26 123.6 210 39.0
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 2.3e-26 123.2 161 44.1
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 3.9e-26 122.5 227 37.0
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 5.1e-26 122.1 234 36.3
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 6.6e-26 121.7 222 37.8
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 1.5e-25 120.6 208 38.5
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 3.3e-25 119.4 207 39.1
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 1.6e-24 117.1 181 41.4
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 3.6e-24 115.9 172 41.3
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 4.7e-24 115.5 179 38.0
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 3.1e-23 112.8 214 37.9
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 4.0e-23 112.5 184 40.2
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 5.2e-23 112.1 209 37.8
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 5.2e-23 112.1 189 41.3
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 6.8e-23 111.7 259 34.7
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 8.9e-23 111.3 158 41.1
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 1.2e-22 110.9 217 36.9
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 2.0e-22 110.2 198 35.4
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 2.0e-22 110.2 214 34.6
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 2.6e-22 109.8 187 40.1
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 2.6e-22 109.8 201 38.8
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 2.6e-22 109.8 189 40.2
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 3.4e-22 109.4 209 37.8
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 3.4e-22 109.4 213 38.0
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 3.4e-22 109.4 228 35.1
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 4.4e-22 109.0 239 33.1
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 5.8e-22 108.6 245 33.1
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 1.3e-21 107.5 179 41.3
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 1.7e-21 107.1 200 35.0
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 2.9e-21 106.3 230 36.1
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 3.7e-21 105.9 217 36.9
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 8.3e-21 104.8 165 40.6
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 8.3e-21 104.8 225 36.9
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 1.4e-20 104.0 229 34.1
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 1.9e-20 103.6 203 36.0
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 2.4e-20 103.2 217 34.6
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 2.4e-20 103.2 186 38.7
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 3.2e-20 102.8 216 38.0
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 5.4e-20 102.1 225 35.1
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 7.1e-20 101.7 205 36.6
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 7.1e-20 101.7 174 37.9
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 1.2e-19 100.9 196 33.7
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 2.1e-19 100.1 193 36.8
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 2.1e-19 100.1 148 42.6
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 2.7e-19 99.8 115 53.0
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 3.5e-19 99.4 225 34.7
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 3.5e-19 99.4 229 33.2
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 4.6e-19 99.0 222 33.3
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 7.8e-19 98.2 230 36.5
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.3e-18 97.4 199 35.7
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 2.3e-18 96.7 217 35.0
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 3.9e-18 95.9 166 37.3
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 3.9e-18 95.9 238 33.6
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 1.1e-17 94.4 200 34.0
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 2.5e-17 93.2 174 37.4
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 3.3e-17 92.8 196 33.7
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 3.3e-17 92.8 199 33.2
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 1.2e-16 90.9 212 33.5
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 1.6e-16 90.5 196 33.7
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 1.6e-16 90.5 196 33.7
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 1.6e-16 90.5 162 41.4
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 1.6e-16 90.5 209 34.9
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 2.1e-16 90.1 273 28.9
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 2.1e-16 90.1 187 32.6
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 2.8e-16 89.7 196 34.7
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 2.8e-16 89.7 196 34.7
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 2.8e-16 89.7 199 34.7
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 3.6e-16 89.4 162 36.4
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 6.2e-16 88.6 163 39.3
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 8.1e-16 88.2 196 34.7
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 2.4e-15 86.7 166 39.2
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 4.0e-15 85.9 249 33.7
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 6.8e-15 85.1 130 41.5
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 9.9e-14 81.3 178 36.5
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 5.4e-12 75.5 196 31.6
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 1.6e-11 73.9 194 32.5
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 6.0e-11 72.0 146 41.1
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 6.0e-11 72.0 136 36.0
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 7.8e-11 71.6 137 40.9
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.5e-09 66.6 146 39.7
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 9.6e-09 64.7 164 34.1
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 2.1e-08 63.5 204 27.0
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 2.8e-08 63.2 85 47.1
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 6.2e-08 62.0 178 32.0
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 1.8e-07 60.5 52 51.9
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 3.4e-06 56.2 114 32.5


User provided reference genes

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