Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1487 Erigeron canadensis HOM05D004389 ORTHO05D005457 1.5e-95 352.8 179 100.0
HanXRQChr14g0460141 Helianthus annuus HOM05D004389 ORTHO05D005457 9.3e-77 290.4 169 87.0
DCAR_008416 Daucus carota HOM05D004389 ORTHO05D005457 2.1e-73 279.3 179 77.1
Dinv23968 Davidia involucrata HOM05D004389 ORTHO05D005457 1.1e-72 276.9 179 77.1
Thecc.05G307100 Theobroma cacao HOM05D004389 ORTHO05D005457 3.1e-72 275.4 179 76.0
Hma1.2p1_0666F.1_g199560 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 1.2e-71 273.5 179 77.1
Hma1.2p1_1362F.1_g278175 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 1.2e-71 273.5 179 77.1
Lj7A473T46 Lonicera japonica HOM05D004389 ORTHO05D005457 2.0e-71 272.7 169 81.1
Haze_04228 Corylus avellana HOM05D004389 ORTHO05D005457 3.4e-71 271.9 179 76.5
Cc02_g33710 Coffea canephora HOM05D004389 ORTHO05D005457 5.8e-71 271.2 179 75.4
Sabra05G0037000 Salix brachista HOM05D004389 ORTHO05D005457 2.2e-70 269.2 176 74.4
Sc16g0008410 Simmondsia chinensis HOM05D004389 ORTHO05D005457 2.9e-70 268.9 179 73.7
COL.COLO4_29544 Corchorus olitorius HOM05D004389 ORTHO05D005457 4.9e-70 268.1 179 73.2
Eucgr.H04472 Eucalyptus grandis HOM05D004389 ORTHO05D005457 6.4e-70 267.7 179 74.9
MBI16_g00840_MAGBIO Magnolia biondii HOM05D004389 ORTHO05D005457 6.4e-70 267.7 179 73.2
Potri.005G036500 Populus trichocarpa HOM05D004389 ORTHO05D005457 6.4e-70 267.7 178 74.7
QL03p004595 Quercus lobata HOM05D004389 ORTHO05D005457 6.4e-70 267.7 178 74.7
CiPaw.07G015300 Carya illinoinensis HOM05D004389 ORTHO05D005457 8.4e-70 267.3 178 73.6
Haze_23899 Corylus avellana HOM05D004389 ORTHO05D005457 8.4e-70 267.3 178 74.7
Duzib177G0146 Durio zibethinus HOM05D004389 ORTHO05D005457 8.4e-70 267.3 179 74.3
Migut.N00707 Erythranthe guttata HOM05D004389 ORTHO05D005457 8.4e-70 267.3 179 72.6
PGR031G3032 Punica granatum HOM05D004389 ORTHO05D005457 8.4e-70 267.3 171 75.4
Lj9C683G9 Lonicera japonica HOM05D004389 ORTHO05D005457 1.1e-69 266.9 178 74.2
GSVIVG01006266001 Vitis vinifera HOM05D004389 ORTHO05D005457 1.1e-69 266.9 179 74.9
Lsat_1_v5_gn_7_96081 Lactuca sativa HOM05D004389 ORTHO05D005457 1.4e-69 266.5 176 79.0
Cfa006553 Carpinus fangiana HOM05D004389 ORTHO05D003318 1.9e-69 266.2 173 76.9
Oeu045484.1 Olea europaea HOM05D004389 ORTHO05D005457 1.9e-69 266.2 179 73.2
COL.COLO4_19842 Corchorus olitorius HOM05D004389 ORTHO05D005457 4.2e-69 265.0 179 72.6
Nitab4.5_0002659g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 5.4e-69 264.6 179 72.6
HanXRQChr04g0126711 Helianthus annuus HOM05D004389 ORTHO05D005457 9.3e-69 263.8 160 86.2
Actinidia05713 Actinidia chinensis HOM05D004389 ORTHO05D005457 1.6e-68 263.1 177 74.0
Gohir.A08G211800 Gossypium hirsutum HOM05D004389 ORTHO05D005457 1.6e-68 263.1 175 74.3
PSO782G4098 Papaver somniferum HOM05D004389 ORTHO05D005457 1.6e-68 263.1 178 72.5
Ciclev10018002m.g Citrus clementina HOM05D004389 ORTHO05D005457 2.1e-68 262.7 179 73.2
Nn8g41138 Nelumbo nucifera HOM05D004389 ORTHO05D005457 2.1e-68 262.7 179 73.7
Nitab4.5_0002329g0100 Nicotiana tabacum HOM05D004389 ORTHO05D005457 2.1e-68 262.7 179 72.6
Gorai.004G242800 Gossypium raimondii HOM05D004389 ORTHO05D005457 2.7e-68 262.3 175 73.7
SGA_v2.0_scaffold16G07733 Striga asiatica HOM05D004389 ORTHO05D005457 3.5e-68 261.9 170 77.6
EL10Ac4g09330 Beta vulgaris HOM05D004389 ORTHO05D005457 6.0e-68 261.2 179 71.5
ClCG03G016830 Citrullus lanatus HOM05D004389 ORTHO05D005457 7.9e-68 260.8 180 75.0
TPR.G33525 Trifolium pratense HOM05D004389 ORTHO05D005457 7.9e-68 260.8 178 75.8
FAN18G1342 Fragaria x ananassa HOM05D004389 ORTHO05D005457 1.0e-67 260.4 179 70.9
Rhsim05G0143800 Rhododendron simsii HOM05D004389 ORTHO05D005457 1.0e-67 260.4 179 73.2
THA.LOC104805865 Tarenaya hassleriana HOM05D004389 ORTHO05D005457 1.0e-67 260.4 179 71.5
Ah.04g159790 Amaranthus hybridus HOM05D004389 ORTHO05D005457 1.3e-67 260.0 179 71.5
Gohir.D08G228501 Gossypium hirsutum HOM05D004389 ORTHO05D005457 1.3e-67 260.0 175 73.7
Potri.013G025600 Populus trichocarpa HOM05D004389 ORTHO05D005457 1.3e-67 260.0 178 71.3
CsaV3_1G039140 Cucumis sativus L. HOM05D004389 ORTHO05D005457 3.0e-67 258.8 168 78.0
vmacro19638 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 3.0e-67 258.8 178 73.6
Sopen12g004700 Solanum pennellii HOM05D004389 ORTHO05D005457 3.9e-67 258.5 169 75.1
arahy.Tifrunner.gnm1.ann1.95MSG7 Arachis hypogaea HOM05D004389 ORTHO05D005457 5.1e-67 258.1 178 70.8
Manes.09G078200 Manihot esculenta HOM05D004389 ORTHO05D005457 5.1e-67 258.1 169 75.7
TAR626G0408 Trochodendron aralioides HOM05D004389 ORTHO05D005457 5.1e-67 258.1 169 75.7
Atru.chr2.467 Acer truncatum HOM05D004389 ORTHO05D005457 6.7e-67 257.7 179 72.6
Cpa.g.sc58.76 Carica papaya HOM05D004389 ORTHO05D005457 6.7e-67 257.7 179 70.9
PSO063G2909 Papaver somniferum HOM05D004389 ORTHO05D005457 6.7e-67 257.7 179 70.9
AUR62006921 Chenopodium quinoa HOM05D004389 ORTHO05D005457 8.7e-67 257.3 179 71.5
FAN05G0231 Fragaria x ananassa HOM05D004389 ORTHO05D005457 8.7e-67 257.3 179 70.9
FAN05G0672 Fragaria x ananassa HOM05D004389 ORTHO05D005457 8.7e-67 257.3 179 70.9
Glyma.05G086900 Glycine max HOM05D004389 ORTHO05D005457 8.7e-67 257.3 170 73.5
Nitab4.5_0000401g0080 Nicotiana tabacum HOM05D004389 ORTHO05D005457 1.1e-66 256.9 168 74.4
PGSC0003DMG400030976 Solanum tuberosum HOM05D004389 ORTHO05D005457 1.1e-66 256.9 169 74.6
Lj1g0012007 Lotus japonicus HOM05D004389 ORTHO05D005457 1.5e-66 256.5 179 71.5
TWI73G0431 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 1.5e-66 256.5 179 71.5
CANSAT21G2311 Cannabis sativa HOM05D004389 ORTHO05D005457 1.9e-66 256.1 172 75.0
Ciclev10002655m.g Citrus clementina HOM05D004389 ORTHO05D005457 1.9e-66 256.1 177 72.3
Solyc12g009810.3 Solanum lycopersicum HOM05D004389 ORTHO05D005457 1.9e-66 256.1 169 74.6
TAR383G0075 Trochodendron aralioides HOM05D004389 ORTHO05D005457 1.9e-66 256.1 170 75.3
Aqoxy7G01925 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 3.3e-66 255.4 175 73.1
SGA_v2.0_scaffold11G05813 Striga asiatica HOM05D004389 ORTHO05D005457 3.3e-66 255.4 169 76.3
RcHm_v2.0_Chr3g0454251 Rosa chinensis HOM05D004389 ORTHO05D005457 4.3e-66 255.0 179 70.4
CANSAT21G1920 Cannabis sativa HOM05D004389 ORTHO05D005457 5.6e-66 254.6 177 72.9
FvH4_6g05471 Fragaria vesca HOM05D004389 ORTHO05D005457 5.6e-66 254.6 179 69.8
LjContig00312_ERROPOS870357g0027537 Lotus japonicus HOM05D004389 ORTHO05D005457 5.6e-66 254.6 179 71.5
PGSC0003DMG402007838 Solanum tuberosum HOM05D004389 ORTHO05D005457 5.6e-66 254.6 179 70.9
AUR62005084 Chenopodium quinoa HOM05D004389 ORTHO05D005457 9.6e-66 253.8 178 69.7
Glyma.06G240600 Glycine max HOM05D004389 ORTHO05D005457 9.6e-66 253.8 179 72.1
Medtr3g115100 Medicago truncatula HOM05D004389 ORTHO05D005457 9.6e-66 253.8 178 72.5
MELO3C015339.2 Cucumis melo HOM05D004389 ORTHO05D005457 2.1e-65 252.7 168 76.8
Sabra13G0026700 Salix brachista HOM05D004389 ORTHO05D005457 2.1e-65 252.7 205 64.4
AUR62000890 Chenopodium quinoa HOM05D004389 ORTHO05D005457 2.8e-65 252.3 179 70.4
Duzib128G0997 Durio zibethinus HOM05D004389 ORTHO05D005457 3.7e-65 251.9 179 70.4
MD04G1208300 Malus domestica HOM05D004389 ORTHO05D005457 3.7e-65 251.9 179 69.8
FAN09G0842 Fragaria x ananassa HOM05D004389 ORTHO05D005457 4.8e-65 251.5 179 69.8
FAN14G5008 Fragaria x ananassa HOM05D004389 ORTHO05D005457 4.8e-65 251.5 179 69.3
CSS0010710 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 6.2e-65 251.1 179 69.8
FAN05G0500 Fragaria x ananassa HOM05D004389 ORTHO05D005457 6.2e-65 251.1 179 69.8
FAN05G1752 Fragaria x ananassa HOM05D004389 ORTHO05D005457 6.2e-65 251.1 179 69.3
Prupe.6G329200 Prunus persica HOM05D004389 ORTHO05D005457 6.2e-65 251.1 179 69.3
CSS0006579 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 1.1e-64 250.4 179 71.5
Phvul.007G101500 Phaseolus vulgaris HOM05D004389 ORTHO05D005457 1.1e-64 250.4 179 72.1
Sp7g15350 Schrenkiella parvula HOM05D004389 ORTHO05D005457 1.1e-64 250.4 178 69.1
FvH4_5g27531 Fragaria vesca HOM05D004389 ORTHO05D005457 1.4e-64 250.0 171 70.8
Medtr3g096610 Medicago truncatula HOM05D004389 ORTHO05D005457 2.4e-64 249.2 170 73.5
HPP92_010418 Vanilla planifolia HOM05D004389 ORTHO05D005457 2.4e-64 249.2 169 74.0
Hund07052 Selenicereus undatus HOM05D004389 ORTHO05D005457 3.1e-64 248.8 193 66.8
BcaNung00158 Brassica carinata HOM05D004389 ORTHO05D005457 5.3e-64 248.1 178 69.1
Sed0018697 Sechium edule HOM05D004389 ORTHO05D005457 5.3e-64 248.1 165 74.5
Aa31sc17G40 Aethionema arabicum HOM05D004389 ORTHO05D005457 9.0e-64 247.3 175 70.9
Aa31sc17G90 Aethionema arabicum HOM05D004389 ORTHO05D005457 9.0e-64 247.3 175 70.9
BcaC09g50404 Brassica carinata HOM05D004389 ORTHO05D005457 9.0e-64 247.3 179 69.3
CARHR223240 Cardamine hirsuta HOM05D004389 ORTHO05D005457 9.0e-64 247.3 175 69.7
unitig_747.g21568 Utricularia gibba HOM05D004389 ORTHO05D005457 9.0e-64 247.3 172 70.9
BolC1t02532H Brassica oleracea HOM05D004389 ORTHO05D005457 2.0e-63 246.1 179 68.7
TWI53G0891 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 2.0e-63 246.1 175 70.3
A01p20570 Brassica napus HOM05D004389 ORTHO05D005457 2.6e-63 245.7 179 68.7
C01p25870 Brassica napus HOM05D004389 ORTHO05D005457 2.6e-63 245.7 179 69.3
BraA01t01985Z Brassica rapa HOM05D004389 ORTHO05D005457 4.5e-63 245.0 179 68.7
CDE02G2165 Ceratophyllum demersum HOM05D004389 ORTHO05D005457 4.5e-63 245.0 176 68.2
Zm00001eb272600 Zea mays HOM05D004389 ORTHO05D005457 5.8e-63 244.6 164 75.0
BcaB03g14176 Brassica carinata HOM05D004389 ORTHO05D005457 7.6e-63 244.2 179 68.7
Carub.0007s2468 Capsella rubella HOM05D004389 ORTHO05D005457 1.3e-62 243.4 179 68.7
ATR0626G001 Amborella trichopoda HOM05D004389 ORTHO05D005457 1.7e-62 243.0 179 66.5
AL7G38020 Arabidopsis lyrata HOM05D004389 ORTHO05D005457 4.9e-62 241.5 175 67.4
Thhalv10026361m.g Eutrema salsugineum HOM05D004389 ORTHO05D005457 6.5e-62 241.1 180 67.8
Zm00001eb264580 Zea mays HOM05D004389 ORTHO05D005457 3.2e-61 238.8 172 72.1
AT4G16710 Arabidopsis thaliana HOM05D004389 ORTHO05D005457 7.1e-61 237.7 175 66.9
AUR62000567 Chenopodium quinoa HOM05D004389 ORTHO05D005457 7.1e-61 237.7 160 72.5
SEGI_15909 Sequoiadendron giganteum HOM05D004389 ORTHO05D005457 9.3e-61 237.3 171 68.4
vmacro08924 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 1.2e-60 236.9 219 58.9
GSVIVG01000019001 Vitis vinifera HOM05D004389 ORTHO05D005457 1.6e-60 236.5 157 74.5
Peaxi162Scf00523g00530 Petunia axillaris HOM05D004389 ORTHO05D005457 3.0e-59 232.3 172 69.2
Rhsim05G0010600 Rhododendron simsii HOM05D004389 ORTHO05D005457 3.7e-57 225.3 210 59.0
RcHm_v2.0_Chr7g0218901 Rosa chinensis HOM05D004389 ORTHO05D005457 1.4e-53 213.4 146 69.9
Psat0s2070g0160 Pisum sativum HOM05D004389 ORTHO05D005457 7.1e-53 211.1 150 71.3
Psat0s1802g0120 Pisum sativum HOM05D004389 ORTHO05D005457 2.1e-52 209.5 150 70.7
Lalb_Chr05g0219701 Lupinus albus HOM05D004389 ORTHO05D005457 3.9e-51 205.3 169 63.3
Dinv40263 Davidia involucrata HOM05D004389 ORTHO05D005457 3.4e-47 192.2 120 81.7
AagrBONN_evm.TU.Sc2ySwM_117.3666 Anthoceros agrestis HOM05D004389 ORTHO05D005457 7.7e-47 191.0 179 52.5
AagrBONN_evm.TU.Sc2ySwM_344.4143 Anthoceros agrestis HOM05D007251 ORTHO05D009266 7.2e-45 184.5 162 54.3
Peaxi162Scf02135g00022 Petunia axillaris HOM05D004389 ORTHO05D005457 3.6e-44 182.2 171 59.1
vmacro22564 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 6.1e-44 181.4 170 59.4
SMO171G0140 Selaginella moellendorffii HOM05D004389 ORTHO05D005457 1.4e-43 180.3 165 52.1
Mapoly0013s0083 Marchantia polymorpha HOM05D004389 ORTHO05D005457 3.9e-43 178.7 165 52.1
Os02g0467700 Oryza sativa ssp. japonica HOM05D004389 ORTHO05D005457 1.7e-41 173.3 115 74.8
Aqoxy4G02160 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 8.2e-41 171.0 129 70.5
Pp3c11_4930 Physcomitrium patens HOM05D004389 ORTHO05D005457 8.2e-41 171.0 163 51.5
Prupe.5G030200 Prunus persica HOM05D004389 ORTHO05D005457 3.1e-40 169.1 117 75.2
Cre13.g585850 Chlamydomonas reinhardtii HOM05D004389 ORTHO05D005457 8.5e-38 161.0 173 50.9
CBR_g24390 Chara braunii HOM05D004389 ORTHO05D005457 2.1e-36 156.4 236 41.1
PRCOL_00003734 Prasinoderma coloniale HOM05D004389 ORTHO05D005457 4.7e-36 155.2 161 51.6
vmacro15018 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 5.1e-35 151.8 154 55.2
MCO09G816 Micromonas commoda HOM05D004389 ORTHO05D005457 4.1e-32 142.1 161 47.8
CAN.G551.74 Capsicum annuum HOM05D004389 ORTHO05D005457 5.3e-32 141.7 104 66.3
vmacro22211 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 1.2e-31 140.6 180 50.0
Zm00001eb058290 Zea mays HOM05D004389 ORTHO05D005457 2.2e-30 136.3 82 78.0
Ca_16978_v3 Cicer arietinum L. HOM05D004389 ORTHO05D005457 1.1e-29 134.0 86 75.6
TPR.G33563 Trifolium pratense HOM05D004389 ORTHO05D005457 1.8e-27 126.7 83 73.5
SHI18162 Sapria himalayana HOM05D004389 ORTHO05D005457 3.3e-26 122.5 138 48.6
RhsimUnG0192500 Rhododendron simsii HOM05D004389 ORTHO05D005457 5.7e-26 121.7 98 65.3
Aqoxy5G02271 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 7.4e-26 121.3 89 65.2
TPR.G30972 Trifolium pratense HOM05D004389 ORTHO05D005457 2.8e-25 119.4 85 68.2
Nitab4.5_0006964g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 1.4e-24 117.1 86 64.0
MD15G1188200 Malus domestica HOM05D004389 ORTHO05D005457 7.0e-24 114.8 117 55.6
Zm00001eb380920 Zea mays HOM05D004389 ORTHO05D005457 1.5e-21 107.1 82 67.1
FvH4_6g10990 Fragaria vesca HOM05D004389 ORTHO05D005457 2.5e-21 106.3 97 55.7
QL07p009462 Quercus lobata HOM05D004389 ORTHO05D005457 5.5e-21 105.1 75 70.7
Actinidia39666 Actinidia chinensis HOM05D004389 ORTHO05D056204 1.3e-17 94.0 138 44.9
Cfa025624 Carpinus fangiana HOM05D004389 ORTHO05D125512 2.1e-12 76.6 217 32.3
SHI18161 Sapria himalayana HOM05D004389 ORTHO05D005457 4.0e-11 72.4 57 59.6
vmacro15154 Vaccinium macrocarpon HOM05D004389 ORTHO05D022937 1.5e-10 70.5 58 60.3
Medtr6g452950 Medicago truncatula HOM05D029366 ORTHO05D022937 6.3e-09 65.1 54 57.4
HPP92_010328 Vanilla planifolia HOM05D004389 ORTHO05D022937 1.8e-08 63.5 44 63.6
QL07p009230 Quercus lobata HOM05D004389 ORTHO05D005457 1.2e-07 60.8 85 44.7
vmacro17239 Vaccinium macrocarpon HOM05D040504 ORTHO05D426804 5.9e-07 58.5 160 31.2


User provided reference genes

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