Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 3.8e-165 584.7 285 100.0
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 3.9e-138 495.0 284 83.1
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 2.0e-137 492.7 284 83.5
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 3.2e-124 448.7 287 75.3
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 2.1e-123 446.0 287 73.2
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 2.1e-123 446.0 290 73.8
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 4.7e-123 444.9 287 73.2
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 3.0e-122 442.2 290 72.1
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 6.8e-122 441.0 287 75.3
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 1.3e-120 436.8 285 73.7
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.2e-120 436.0 285 73.7
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 8.3e-120 434.1 286 73.4
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 8.3e-120 434.1 287 72.8
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 1.1e-119 433.7 288 72.2
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 1.4e-119 433.3 283 73.9
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 3.1e-119 432.2 287 71.4
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 3.1e-119 432.2 283 74.6
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 4.1e-119 431.8 285 71.9
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 5.4e-119 431.4 283 71.4
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 9.1e-119 430.6 290 73.1
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 2.7e-118 429.1 287 70.7
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 3.5e-118 428.7 288 70.8
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 4.5e-118 428.3 283 73.1
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 7.7e-118 427.6 297 71.4
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 1.7e-117 426.4 285 72.6
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 1.7e-117 426.4 285 73.7
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 6.5e-117 424.5 287 71.8
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 1.9e-116 422.9 287 71.1
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 2.5e-116 422.5 287 71.4
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 3.3e-116 422.2 288 71.5
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 3.3e-116 422.2 288 72.2
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 4.2e-116 421.8 287 70.7
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 4.2e-116 421.8 287 70.7
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 7.2e-116 421.0 288 73.3
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 1.2e-115 420.2 287 71.1
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 3.6e-115 418.7 288 69.1
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 8.0e-115 417.5 288 69.4
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 8.0e-115 417.5 287 70.4
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 8.0e-115 417.5 291 70.1
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.0e-114 417.2 309 67.3
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 1.0e-114 417.2 288 72.2
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 3.0e-114 415.6 287 69.3
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 4.0e-114 415.2 285 70.9
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 5.2e-114 414.8 288 71.9
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 8.9e-114 414.1 286 69.2
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 8.9e-114 414.1 288 69.1
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 1.5e-113 413.3 289 69.9
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 2.0e-113 412.9 285 70.5
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 4.9e-112 408.3 287 67.6
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 1.1e-111 407.1 290 69.0
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 1.4e-111 406.8 287 68.6
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 4.1e-111 405.2 288 69.8
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 9.2e-111 404.1 287 67.6
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 1.2e-110 403.7 287 69.0
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 2.7e-110 402.5 288 67.4
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 3.5e-110 402.1 283 67.8
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 5.9e-110 401.4 312 65.4
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 1.1e-108 397.1 287 68.3
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 1.5e-108 396.7 287 67.2
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 2.5e-108 396.0 284 65.8
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 2.5e-108 396.0 284 66.5
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.5e-108 396.0 292 68.8
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 1.2e-107 393.7 306 65.4
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 1.0e-106 390.6 288 65.6
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 1.8e-106 389.8 285 64.9
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 4.0e-106 388.7 290 66.9
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 3.4e-105 385.6 288 65.6
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 1.7e-104 383.3 290 65.9
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 6.4e-104 381.3 283 65.7
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 1.1e-103 380.6 340 57.4
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 1.4e-103 380.2 287 63.8
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 1.4e-103 380.2 286 64.3
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 7.0e-103 377.9 283 67.8
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 9.2e-103 377.5 285 67.7
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 1.2e-102 377.1 286 67.5
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 6.0e-102 374.8 281 68.7
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 1.3e-101 373.6 287 64.8
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 1.7e-101 373.2 287 64.8
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 8.6e-101 370.9 289 63.0
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 1.5e-100 370.2 287 63.8
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 1.5e-100 370.2 256 69.9
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 1.9e-100 369.8 287 64.1
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 3.3e-100 369.0 287 64.1
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 3.3e-100 369.0 287 64.1
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 1.4e-98 363.6 219 79.0
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 9.8e-97 357.5 283 62.5
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 2.2e-96 356.3 363 52.1
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 1.2e-89 334.0 286 59.1
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 2.6e-89 332.8 288 60.4
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 4.4e-89 332.0 286 59.8
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 1.7e-88 330.1 227 72.7
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 3.7e-88 328.9 248 67.7
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 3.2e-87 325.9 288 58.0
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 3.2e-87 325.9 271 62.0
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.0e-85 320.9 282 55.7
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 3.0e-85 319.3 289 54.7
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 6.6e-85 318.2 278 56.1
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 1.4e-82 310.5 278 53.6
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 2.4e-82 309.7 203 71.9
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 2.4e-79 299.7 442 42.5
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 2.1e-75 286.6 251 57.4
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.7e-69 266.9 287 51.2
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 2.8e-67 259.6 289 48.8
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 2.0e-65 253.4 344 40.1
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 1.4e-63 247.3 181 65.7
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 1.3e-59 234.2 184 61.4
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 3.4e-57 226.1 199 58.8
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 1.0e-53 214.5 158 62.7
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 2.1e-51 206.8 173 57.2
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 4.3e-36 156.0 142 59.9
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 5.7e-36 155.6 107 65.4
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 1.0e-32 144.8 204 44.1
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 1.0e-32 144.8 108 61.1
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 2.4e-26 123.6 434 24.7
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 1.5e-25 120.9 262 30.2
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 1.1e-18 98.2 71 70.4
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 2.0e-17 94.0 61 72.1
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 2.2e-16 90.5 67 61.2
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 9.7e-12 75.1 49 73.5
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 2.9e-08 63.5 41 70.7


User provided reference genes

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