Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1258 Erigeron canadensis HOM05D007227 ORTHO05D002252 1.4e-45 186.0 100 100.0
HanXRQChr16g0505811 Helianthus annuus HOM05D007227 ORTHO05D002252 8.1e-30 133.7 98 69.4
HanXRQChr04g0127891 Helianthus annuus HOM05D007227 ORTHO05D002252 2.4e-26 122.1 78 76.9
Lsat_1_v5_gn_9_109540 Lactuca sativa HOM05D007227 ORTHO05D002252 3.5e-17 91.7 75 57.3
Lsat_1_v5_gn_7_89361 Lactuca sativa HOM05D007227 ORTHO05D002252 3.9e-16 88.2 63 63.5
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 7.6e-12 73.9 77 45.5
Oeu014341.1 Olea europaea HOM05D007227 ORTHO05D002252 2.2e-11 72.4 78 46.2
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 6.5e-11 70.9 90 40.0
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 1.4e-10 69.7 79 43.0
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 1.9e-10 69.3 99 37.4
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 5.5e-10 67.8 88 39.8
LjContig00081g0009252 Lotus japonicus HOM05D007227 ORTHO05D002252 5.5e-10 67.8 82 37.8
Glyma.02G300900 Glycine max HOM05D007227 ORTHO05D002252 7.1e-10 67.4 74 41.9
Lalb_Chr19g0138601 Lupinus albus HOM05D007227 ORTHO05D002252 7.1e-10 67.4 85 38.8
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 9.3e-10 67.0 80 37.5
Peaxi162Scf00003g01323 Petunia axillaris HOM05D007227 ORTHO05D002252 1.2e-09 66.6 64 50.0
Gohir.D01G169400 Gossypium hirsutum HOM05D007227 ORTHO05D002252 2.7e-09 65.5 80 36.2
TPR.G38124 Trifolium pratense HOM05D007227 ORTHO05D002252 2.7e-09 65.5 80 37.5
MD10G1078100 Malus domestica HOM05D007227 ORTHO05D002252 3.5e-09 65.1 79 41.8
Cfa005018 Carpinus fangiana HOM05D007227 ORTHO05D002252 4.6e-09 64.7 86 39.5
Glyma.04G013400 Glycine max HOM05D007227 ORTHO05D002252 4.6e-09 64.7 79 38.0
Gohir.A01G178500 Gossypium hirsutum HOM05D007227 ORTHO05D002252 4.6e-09 64.7 80 37.5
Medtr4g069770 Medicago truncatula HOM05D007227 ORTHO05D002252 7.9e-09 63.9 84 36.9
Potri.009G114400 Populus trichocarpa HOM05D007227 ORTHO05D002252 1.0e-08 63.5 71 47.9
MD00G1082000 Malus domestica HOM05D007227 ORTHO05D002252 1.3e-08 63.2 91 38.5
Phvul.009G024600 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 1.3e-08 63.2 80 37.5
Phvul.011G046400 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 1.8e-08 62.8 87 33.3
Glyma.11G119200 Glycine max HOM05D007227 ORTHO05D002252 2.3e-08 62.4 66 43.9
VMungo1127G0518 Vigna mungo HOM05D007227 ORTHO05D002252 2.3e-08 62.4 82 35.4
TPR.G9008 Trifolium pratense HOM05D007227 ORTHO05D002252 3.0e-08 62.0 70 40.0
Glyma.06G013300 Glycine max HOM05D007227 ORTHO05D002252 5.1e-08 61.2 75 38.7
Glyma.12G044400 Glycine max HOM05D007227 ORTHO05D002252 5.1e-08 61.2 66 43.9
Sabra04G0101600 Salix brachista HOM05D007227 ORTHO05D002252 5.1e-08 61.2 75 40.0
HanXRQChr13g0410611 Helianthus annuus HOM05D017364 ORTHO05D002252 6.7e-08 60.8 92 38.0
LjContig00081g0025580 Lotus japonicus HOM05D007227 ORTHO05D002252 8.7e-08 60.5 72 36.1
Nitab4.5_0001794g0120 Nicotiana tabacum HOM05D007227 ORTHO05D002252 8.7e-08 60.5 60 48.3
Ciclev10029608m.g Citrus clementina HOM05D007227 ORTHO05D002252 1.5e-07 59.7 80 36.2
FAN15G1220 Fragaria x ananassa HOM05D007227 ORTHO05D002252 1.5e-07 59.7 93 32.3
Lalb_Chr23g0265441 Lupinus albus HOM05D007227 ORTHO05D002252 1.9e-07 59.3 81 35.8
LjContig00272g0019714 Lotus japonicus HOM05D007227 ORTHO05D002252 2.5e-07 58.9 82 32.9
Potri.004G153200 Populus trichocarpa HOM05D007227 ORTHO05D002252 2.5e-07 58.9 75 38.7
FAN27G2103 Fragaria x ananassa HOM05D007227 ORTHO05D002252 3.3e-07 58.5 93 32.3
RcHm_v2.0_Chr6g0263881 Rosa chinensis HOM05D007227 ORTHO05D002252 3.3e-07 58.5 83 36.1
SalBow6G0041 Salvia bowleyana HOM05D007227 ORTHO05D002252 3.3e-07 58.5 71 39.4
SalBow6G1279 Salvia bowleyana HOM05D007227 ORTHO05D002252 3.3e-07 58.5 71 39.4
FvH4_2g08520 Fragaria vesca HOM05D007227 ORTHO05D002252 4.3e-07 58.2 93 32.3
FAN24G3084 Fragaria x ananassa HOM05D007227 ORTHO05D002252 4.3e-07 58.2 93 32.3
Psat7g141720 Pisum sativum HOM05D007227 ORTHO05D002252 5.7e-07 57.8 86 36.0
arahy.Tifrunner.gnm1.ann1.16ZZBQ Arachis hypogaea HOM05D007227 ORTHO05D002252 7.4e-07 57.4 85 37.6
MSTRG.27703 Avicennia marina HOM05D007227 ORTHO05D002252 7.4e-07 57.4 88 34.1
CARHR039300 Cardamine hirsuta HOM05D009461 ORTHO05D002252 7.4e-07 57.4 79 40.5
HanXRQChr16g0524731 Helianthus annuus HOM05D017364 ORTHO05D002252 7.4e-07 57.4 88 37.5
Lj1g0025376 Lotus japonicus HOM05D007227 ORTHO05D002252 7.4e-07 57.4 80 33.8
Prupe.8G099800 Prunus persica HOM05D007227 ORTHO05D002252 7.4e-07 57.4 83 38.6
EL10Ac9g21739 Beta vulgaris HOM05D007227 ORTHO05D002252 9.6e-07 57.0 92 37.0
Manes.17G100100 Manihot esculenta HOM05D007227 ORTHO05D002252 9.6e-07 57.0 77 42.9
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 9.6e-07 57.0 80 37.5
BcaB04g17352 Brassica carinata HOM05D009461 ORTHO05D002252 1.3e-06 56.6 77 41.6
A07p00480 Brassica napus HOM05D009461 ORTHO05D002252 1.3e-06 56.6 71 43.7
BraA07t27839Z Brassica rapa HOM05D009461 ORTHO05D002252 1.3e-06 56.6 71 43.7
Thhalv10011902m.g Eutrema salsugineum HOM05D009461 ORTHO05D002252 1.3e-06 56.6 71 43.7
Sed0019925 Sechium edule HOM05D007227 ORTHO05D002252 1.3e-06 56.6 91 38.5
BcaC06g36704 Brassica carinata HOM05D009461 ORTHO05D002252 2.1e-06 55.8 79 39.2
C07p00920 Brassica napus HOM05D009461 ORTHO05D002252 2.1e-06 55.8 79 39.2
BolC7t40528H Brassica oleracea HOM05D009461 ORTHO05D002252 2.1e-06 55.8 79 39.2
CSS0026369 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 2.1e-06 55.8 81 38.3
Lj9C368G9 Lonicera japonica HOM05D007227 ORTHO05D002252 2.1e-06 55.8 75 37.3
arahy.Tifrunner.gnm1.ann1.ZTQ30L Arachis hypogaea HOM05D007227 ORTHO05D002252 2.8e-06 55.5 85 37.6
Migut.N01231 Erythranthe guttata HOM05D007227 ORTHO05D002252 2.8e-06 55.5 85 38.8
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 2.8e-06 55.5 74 36.5
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 2.8e-06 55.5 81 37.0
Lj3g0002713 Lotus japonicus HOM05D007227 ORTHO05D002252 2.8e-06 55.5 86 33.7
MSTRG.20093 Avicennia marina HOM05D007227 ORTHO05D002252 3.7e-06 55.1 74 39.2
HanXRQChr08g0216611 Helianthus annuus HOM05D052495 ORTHO05D002252 3.7e-06 55.1 73 43.8
Peaxi162Scf00016g00938 Petunia axillaris HOM05D007227 ORTHO05D002252 3.7e-06 55.1 78 39.7
AUR62011338 Chenopodium quinoa HOM05D007227 ORTHO05D002252 4.8e-06 54.7 76 35.5
Sp1g36190 Schrenkiella parvula HOM05D009461 ORTHO05D002252 4.8e-06 54.7 69 43.5
HanXRQChr01g0007701 Helianthus annuus HOM05D017364 ORTHO05D002252 6.2e-06 54.3 89 39.3
A08p04090 Brassica napus HOM05D009461 ORTHO05D002252 8.2e-06 53.9 78 39.7
BraA08t32434Z Brassica rapa HOM05D009461 ORTHO05D002252 8.2e-06 53.9 78 39.7
Carub.0001s3849 Capsella rubella HOM05D009461 ORTHO05D002252 8.2e-06 53.9 76 39.5
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 8.2e-06 53.9 74 35.1
Medtr5g095980 Medicago truncatula HOM05D007227 ORTHO05D002252 8.2e-06 53.9 82 31.7
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 8.2e-06 53.9 79 39.2


User provided reference genes

Program Settings