Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1239 Erigeron canadensis HOM05D004411 ORTHO05D005569 3.2e-125 451.8 236 100.0
ECA236G1785 Erigeron canadensis HOM05D004411 ORTHO05D005569 4.6e-108 394.8 234 89.7
HanXRQChr11g0336281 Helianthus annuus HOM05D004411 ORTHO05D005569 6.7e-67 258.1 234 62.8
Lsat_1_v5_gn_7_109101 Lactuca sativa HOM05D004411 ORTHO05D005569 2.5e-61 239.6 237 61.2
Dinv40733 Davidia involucrata HOM05D004411 ORTHO05D005569 7.2e-45 184.9 240 50.0
Hma1.2p1_0938F.1_g239200 Hydrangea macrophylla HOM05D004411 ORTHO05D005569 6.1e-44 181.8 241 48.5
GSVIVG01008286001 Vitis vinifera HOM05D004411 ORTHO05D005569 7.5e-42 174.9 239 51.0
Actinidia35328 Actinidia chinensis HOM05D004411 ORTHO05D005569 1.3e-41 174.1 249 49.0
Dinv22283 Davidia involucrata HOM05D004411 ORTHO05D005569 1.7e-41 173.7 238 49.6
DCAR_008678 Daucus carota HOM05D004411 ORTHO05D005569 2.8e-41 172.9 230 47.4
Ciclev10008629m.g Citrus clementina HOM05D004411 ORTHO05D005569 3.7e-41 172.6 237 48.1
CSS0013783 Camellia sinensis var. sinensis HOM05D004411 ORTHO05D005569 8.3e-41 171.4 244 46.7
Rhsim04G0001700 Rhododendron simsii HOM05D004411 ORTHO05D005569 1.8e-40 170.2 243 48.1
Prupe.4G208500 Prunus persica HOM05D004411 ORTHO05D005569 4.1e-40 169.1 236 49.6
TAR627G0926 Trochodendron aralioides HOM05D004411 ORTHO05D005569 1.6e-39 167.2 253 46.2
QL08p011929 Quercus lobata HOM05D004411 ORTHO05D005569 2.7e-39 166.4 254 46.9
CiPaw.05G090700 Carya illinoinensis HOM05D004411 ORTHO05D005569 5.9e-39 165.2 246 45.1
CAN.G337.104 Capsicum annuum HOM05D004411 ORTHO05D005569 1.3e-38 164.1 239 43.9
Cc02_g24710 Coffea canephora HOM05D004411 ORTHO05D005569 1.3e-38 164.1 242 43.8
QL08p012116 Quercus lobata HOM05D004411 ORTHO05D005569 6.6e-38 161.8 253 46.2
MD11G1222400 Malus domestica HOM05D004411 ORTHO05D005569 8.6e-38 161.4 236 47.9
vmacro09736 Vaccinium macrocarpon HOM05D004411 ORTHO05D005569 1.1e-37 161.0 243 46.9
RcHm_v2.0_Chr5g0037971 Rosa chinensis HOM05D004411 ORTHO05D005569 3.3e-37 159.5 234 46.6
Peaxi162Scf00450g00868 Petunia axillaris HOM05D004411 ORTHO05D005569 9.5e-37 157.9 236 43.2
PGR083G2632 Punica granatum HOM05D004411 ORTHO05D005569 9.5e-37 157.9 246 46.7
Duzib213G0043 Durio zibethinus HOM05D004411 ORTHO05D005569 2.1e-36 156.8 237 42.6
Solyc07g064300.3 Solanum lycopersicum HOM05D004411 ORTHO05D005569 2.8e-36 156.4 241 45.2
FvH4_3g22120 Fragaria vesca HOM05D004411 ORTHO05D005569 3.6e-36 156.0 236 45.8
Gohir.D01G064500 Gossypium hirsutum HOM05D004411 ORTHO05D005569 4.7e-36 155.6 238 42.4
Nitab4.5_0009551g0010 Nicotiana tabacum HOM05D004411 ORTHO05D005569 4.7e-36 155.6 260 40.8
Gohir.A01G077000 Gossypium hirsutum HOM05D004411 ORTHO05D005569 6.1e-36 155.2 233 42.5
Sopen07g032450 Solanum pennellii HOM05D004411 ORTHO05D005569 8.0e-36 154.8 241 44.8
TAR624G0740 Trochodendron aralioides HOM05D004411 ORTHO05D005569 8.0e-36 154.8 236 45.8
Potri.011G136400 Populus trichocarpa HOM05D004411 ORTHO05D005569 1.4e-35 154.1 244 45.5
Rhsim04G0000600 Rhododendron simsii HOM05D004411 ORTHO05D005569 1.4e-35 154.1 256 43.4
Thecc.07G044400 Theobroma cacao HOM05D004411 ORTHO05D005569 1.4e-35 154.1 239 43.1
Gorai.002G085400 Gossypium raimondii HOM05D004411 ORTHO05D005569 2.3e-35 153.3 237 42.2
MELO3C003591.2 Cucumis melo HOM05D004411 ORTHO05D005569 3.0e-35 152.9 238 47.1
Atru.chr2.3274 Acer truncatum HOM05D004411 ORTHO05D005569 5.2e-35 152.1 263 43.0
CANSAT56G2724 Cannabis sativa HOM05D004411 ORTHO05D005569 8.9e-35 151.4 246 43.5
Oeu021397.1 Olea europaea HOM05D004411 ORTHO05D005569 1.5e-34 150.6 248 42.7
ClCG10G005570 Citrullus lanatus HOM05D004411 ORTHO05D005569 5.7e-34 148.7 238 45.8
Eucgr.E01365 Eucalyptus grandis HOM05D004411 ORTHO05D005569 5.7e-34 148.7 253 41.5
Psat5g216880 Pisum sativum HOM05D004411 ORTHO05D005569 5.7e-34 148.7 233 45.9
Migut.H01843 Erythranthe guttata HOM05D004411 ORTHO05D005569 7.5e-34 148.3 254 43.3
SGA_v2.0_scaffold9G05058 Striga asiatica HOM05D004411 ORTHO05D005569 1.3e-33 147.5 268 37.3
Lalb_Chr18g0049751 Lupinus albus HOM05D004411 ORTHO05D005569 2.2e-33 146.7 237 41.8
PSO210G6597 Papaver somniferum HOM05D004411 ORTHO05D005569 3.7e-33 146.0 249 41.4
MSTRG.12964 Avicennia marina HOM05D004411 ORTHO05D005569 4.9e-33 145.6 262 39.7
Atru.chr7.1306 Acer truncatum HOM05D004411 ORTHO05D005569 6.4e-33 145.2 137 60.6
Lj6g0013350 Lotus japonicus HOM05D004411 ORTHO05D005569 6.4e-33 145.2 243 45.3
TWI38G0098 Tripterygium wilfordii HOM05D004411 ORTHO05D005569 6.4e-33 145.2 250 41.6
COL.COLO4_09627 Corchorus olitorius HOM05D004411 ORTHO05D005569 1.1e-32 144.4 228 43.9
Medtr3g019330 Medicago truncatula HOM05D004411 ORTHO05D005569 1.1e-32 144.4 235 44.7
Sed0027425 Sechium edule HOM05D004411 ORTHO05D005569 1.1e-32 144.4 232 42.2
PSO210G7535 Papaver somniferum HOM05D004411 ORTHO05D005569 1.4e-32 144.1 256 39.8
Sc06g0005160 Simmondsia chinensis HOM05D004411 ORTHO05D005569 3.2e-32 142.9 239 43.1
Ah.06g195930 Amaranthus hybridus HOM05D004411 ORTHO05D005569 4.1e-32 142.5 239 45.2
Ca_05663_v3 Cicer arietinum L. HOM05D004411 ORTHO05D005569 2.0e-31 140.2 253 40.3
SalBow7G1998 Salvia bowleyana HOM05D004411 ORTHO05D005569 2.7e-31 139.8 265 38.1
TWI38G2195 Tripterygium wilfordii HOM05D004411 ORTHO05D005569 1.0e-30 137.9 134 56.7
RcHm_v2.0_Chr1g0330851 Rosa chinensis HOM05D004411 ORTHO05D005569 1.3e-30 137.5 110 65.5
CsaV3_3G017510 Cucumis sativus L. HOM05D004411 ORTHO05D005569 2.3e-30 136.7 242 40.5
Hund07317 Selenicereus undatus HOM05D004411 ORTHO05D005569 2.3e-30 136.7 251 42.2
Oeu005458.1 Olea europaea HOM05D004411 ORTHO05D005569 3.9e-30 136.0 252 39.3
EL10Ac9g22002 Beta vulgaris HOM05D004411 ORTHO05D005569 5.0e-30 135.6 244 43.0
Glyma.08G313000 Glycine max HOM05D004411 ORTHO05D005569 5.0e-30 135.6 137 54.0
Ca_24447_v3 Cicer arietinum L. HOM05D004411 ORTHO05D005569 1.1e-29 134.4 237 40.1
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.1e-29 134.4 258 39.5
Sabra11G0122500 Salix brachista HOM05D004411 ORTHO05D005569 1.5e-29 134.0 260 41.2
TPR.G3855 Trifolium pratense HOM05D004411 ORTHO05D005569 1.5e-29 134.0 163 49.7
Glyma.08G318600 Glycine max HOM05D004411 ORTHO05D005569 1.9e-29 133.7 197 44.7
arahy.Tifrunner.gnm1.ann1.7KL5HB Arachis hypogaea HOM05D004411 ORTHO05D005569 2.5e-29 133.3 250 38.0
arahy.Tifrunner.gnm1.ann1.01DGNM Arachis hypogaea HOM05D004411 ORTHO05D005569 3.3e-29 132.9 240 38.3
CDE07G0547 Ceratophyllum demersum HOM05D004411 ORTHO05D005569 4.3e-29 132.5 238 39.5
THA.LOC104798777 Tarenaya hassleriana HOM05D004411 ORTHO05D005569 4.3e-29 132.5 236 39.4
AT1G50910 Arabidopsis thaliana HOM05D004411 ORTHO05D005569 1.2e-28 131.0 188 44.7
unitig_0.g2388 Utricularia gibba HOM05D004411 ORTHO05D005569 2.8e-28 129.8 204 40.7
CiPaw.11G186800 Carya illinoinensis HOM05D004411 ORTHO05D005569 8.0e-28 128.3 99 68.7
AL1G58640 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 1.0e-27 127.9 211 42.7
Medtr4g088440 Medicago truncatula HOM05D004411 ORTHO05D005569 1.0e-27 127.9 139 52.5
CARHR040960 Cardamine hirsuta HOM05D004411 ORTHO05D005569 1.8e-27 127.1 131 55.7
Lj2g0018498 Lotus japonicus HOM05D004411 ORTHO05D005569 3.1e-27 126.3 238 41.2
Carub.0001s3986 Capsella rubella HOM05D004411 ORTHO05D005569 8.9e-27 124.8 139 51.1
Aqoxy3G00168 Aquilegia oxysepala HOM05D004411 ORTHO05D005569 1.5e-26 124.0 236 38.6
Phvul.006G038300 Phaseolus vulgaris HOM05D004411 ORTHO05D005569 2.6e-26 123.2 234 41.5
AUR62000402 Chenopodium quinoa HOM05D004411 ORTHO05D005569 1.3e-25 120.9 225 41.3
Aa31LG10G3320 Aethionema arabicum HOM05D004411 ORTHO05D005569 1.7e-25 120.6 137 48.9
BcaB07g33532 Brassica carinata HOM05D004411 ORTHO05D005569 1.7e-25 120.6 200 42.0
BraA06t23489Z Brassica rapa HOM05D004411 ORTHO05D005569 2.2e-25 120.2 139 51.1
BcaC08g43264 Brassica carinata HOM05D004411 ORTHO05D005569 2.9e-25 119.8 139 51.1
C06p06080 Brassica napus HOM05D004411 ORTHO05D005569 2.9e-25 119.8 139 51.1
BolC6t35721H Brassica oleracea HOM05D004411 ORTHO05D005569 2.9e-25 119.8 139 51.1
Sp1g37650 Schrenkiella parvula HOM05D004411 ORTHO05D005569 2.9e-25 119.8 208 41.8
Thhalv10011488m.g Eutrema salsugineum HOM05D004411 ORTHO05D005569 4.9e-25 119.0 139 50.4
A06p02820 Brassica napus HOM05D004411 ORTHO05D005569 1.9e-24 117.1 222 40.5
Aqoxy7G03937 Aquilegia oxysepala HOM05D004411 ORTHO05D005569 3.2e-24 116.3 222 37.4
ATR0564G530 Amborella trichopoda HOM05D004411 ORTHO05D005569 1.6e-23 114.0 109 57.8
Os09g0504900 Oryza sativa ssp. japonica HOM05D004411 ORTHO05D005569 2.3e-22 110.2 238 36.1
Zm00001eb317630 Zea mays HOM05D004411 ORTHO05D005569 3.0e-22 109.8 233 33.5
PGSC0003DMG402013923 Solanum tuberosum HOM05D004411 ORTHO05D005569 8.6e-22 108.2 232 35.8
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 1.5e-21 107.5 207 40.1
Glyma.09G101400 Glycine max HOM05D004411 ORTHO05D005569 3.3e-21 106.3 208 38.9
VMungo1383G3213 Vigna mungo HOM05D004411 ORTHO05D005569 7.3e-21 105.1 124 46.8
VMungo0540G0671 Vigna mungo HOM05D004411 ORTHO05D005569 1.2e-20 104.4 116 48.3
PSO210G0554 Papaver somniferum HOM05D004411 ORTHO05D005569 2.1e-20 103.6 84 65.5
Zm00001eb253190 Zea mays HOM05D004411 ORTHO05D005569 2.8e-20 103.2 153 41.2
PSO339G6638 Papaver somniferum HOM05D004411 ORTHO05D005569 1.4e-19 100.9 136 47.8
SEGI_26616 Sequoiadendron giganteum HOM05D004411 ORTHO05D005569 1.8e-19 100.5 140 43.6
Nn1g07099 Nelumbo nucifera HOM05D004411 ORTHO05D005569 4.0e-19 99.4 72 75.0
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 5.2e-19 99.0 196 37.8
SHI31835 Sapria himalayana HOM05D004411 ORTHO05D005569 6.8e-19 98.6 133 47.4
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 3.4e-18 96.3 258 32.9
Manes.03G127300 Manihot esculenta HOM05D004411 ORTHO05D005569 3.4e-18 96.3 188 39.4
C05p33200 Brassica napus HOM05D004411 ORTHO05D005569 4.4e-18 95.9 90 56.7
BolC5t32046H Brassica oleracea HOM05D004411 ORTHO05D005569 4.4e-18 95.9 90 56.7
PGSC0003DMG401013923 Solanum tuberosum HOM05D004411 ORTHO05D005569 1.3e-17 94.4 133 42.1
Lalb_Chr15g0080391 Lupinus albus HOM05D004411 ORTHO05D005569 1.7e-17 94.0 72 69.4
HPP92_013625 Vanilla planifolia HOM05D004411 ORTHO05D005569 1.7e-17 94.0 237 36.3
AL8G37460 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 3.7e-17 92.8 87 63.2
Nitab4.5_0000622g0210 Nicotiana tabacum HOM05D004411 ORTHO05D005569 3.7e-17 92.8 71 70.4
BcaB02g11193 Brassica carinata HOM05D004411 ORTHO05D005569 6.4e-17 92.0 227 33.5
FAN21G4008 Fragaria x ananassa HOM05D004411 ORTHO05D005569 1.9e-16 90.5 212 34.0
Nitab4.5_0000397g0320 Nicotiana tabacum HOM05D004411 ORTHO05D005569 1.9e-16 90.5 263 30.4
AL2G19790 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 1.2e-15 87.8 72 68.1
BcaB06g26197 Brassica carinata HOM05D004411 ORTHO05D005569 1.3e-14 84.3 229 32.8
EL10Ac9g22233 Beta vulgaris HOM05D004411 ORTHO05D005569 1.1e-13 81.3 200 36.0
AUR62006758 Chenopodium quinoa HOM05D004411 ORTHO05D005569 2.5e-13 80.1 207 33.3
MD03G1208200 Malus domestica HOM05D004411 ORTHO05D005569 5.6e-13 79.0 226 32.3
Haze_07158 Corylus avellana HOM05D004411 ORTHO05D005569 1.8e-11 73.9 69 58.0
Cpa.g.sc12.166 Carica papaya HOM05D004411 ORTHO05D005569 1.7e-09 67.4 212 32.5
Lalb_Chr15g0080381 Lupinus albus HOM05D004411 ORTHO05D005569 6.4e-09 65.5 101 36.6
Pp3c25_11530 Physcomitrium patens HOM05D004411 ORTHO05D005569 1.3e-06 57.8 100 35.0
AagrBONN_evm.TU.Sc2ySwM_344.3992 Anthoceros agrestis HOM05D004411 ORTHO05D005569 3.0e-06 56.6 119 33.6


User provided reference genes

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