Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 6.3e-227 790.4 394 100.0
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 1.0e-168 597.0 392 77.0
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 4.7e-158 561.6 391 73.4
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 5.0e-115 418.7 394 55.6
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 4.2e-114 415.6 394 55.3
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 2.2e-110 403.3 389 56.3
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 1.2e-108 397.5 393 55.2
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 7.7e-108 394.8 393 55.5
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 1.0e-107 394.4 403 55.3
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 5.0e-107 392.1 403 54.1
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 1.9e-106 390.2 392 53.6
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 3.2e-106 389.4 399 53.1
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 1.2e-105 387.5 297 66.0
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 1.6e-105 387.1 321 59.8
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 2.1e-105 386.7 329 60.2
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 2.1e-105 386.7 388 55.9
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 2.7e-105 386.3 380 56.3
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 4.7e-105 385.6 347 57.3
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 4.7e-105 385.6 399 55.4
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 1.4e-104 384.0 388 53.1
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 2.3e-104 383.3 396 54.0
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 1.1e-103 380.9 380 53.9
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 1.5e-103 380.6 336 57.7
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 2.6e-103 379.8 403 51.1
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 2.6e-103 379.8 396 54.0
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 3.3e-103 379.4 335 57.9
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 4.4e-103 379.0 317 61.8
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 2.2e-102 376.7 399 52.9
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 8.2e-102 374.8 388 53.1
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 8.2e-102 374.8 416 50.2
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 1.1e-101 374.4 401 51.6
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 2.4e-101 373.2 392 52.3
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 9.1e-101 371.3 374 51.6
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 1.6e-100 370.5 355 54.1
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 4.5e-100 369.0 333 55.6
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 7.7e-100 368.2 318 59.7
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 7.7e-100 368.2 404 50.7
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 8.5e-99 364.8 355 54.1
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 1.9e-98 363.6 334 55.4
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 7.2e-98 361.7 327 56.9
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 9.4e-98 361.3 387 51.7
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 9.4e-98 361.3 354 52.5
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 1.2e-97 360.9 392 52.3
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 2.7e-97 359.8 346 53.2
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 4.7e-97 359.0 392 50.5
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 6.1e-97 358.6 428 47.2
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.3e-96 356.7 416 48.1
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 4.0e-96 355.9 298 59.7
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 8.8e-96 354.8 384 52.1
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 7.5e-95 351.7 313 59.4
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 3.7e-94 349.4 346 53.8
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 1.4e-93 347.4 293 59.0
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 1.8e-93 347.1 282 58.9
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 2.4e-93 346.7 346 53.8
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 4.1e-93 345.9 387 52.5
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 4.1e-93 345.9 386 51.3
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 9.1e-93 344.7 295 58.3
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 9.1e-93 344.7 318 53.8
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 1.2e-92 344.4 393 50.1
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 2.0e-92 343.6 340 54.1
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 2.7e-92 343.2 327 55.7
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 5.9e-92 342.0 391 52.2
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 5.9e-92 342.0 316 54.1
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 5.9e-92 342.0 316 54.1
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 1.0e-91 341.3 354 52.5
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 1.3e-91 340.9 395 47.3
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 3.8e-91 339.3 345 53.9
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 8.5e-91 338.2 339 52.8
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 8.5e-91 338.2 359 51.8
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 1.5e-90 337.4 361 51.5
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 1.9e-90 337.0 363 51.8
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 9.4e-90 334.7 395 52.2
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 1.2e-89 334.3 343 51.9
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 1.6e-89 334.0 387 49.4
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 2.1e-89 333.6 368 51.4
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 2.1e-89 333.6 390 49.7
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 2.7e-89 333.2 400 47.0
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 8.0e-89 331.6 403 49.1
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 1.4e-88 330.9 304 57.2
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.3e-88 330.1 348 52.3
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 6.8e-88 328.6 339 51.0
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 2.6e-87 326.6 313 52.4
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 7.5e-87 325.1 377 52.3
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 9.8e-87 324.7 327 54.1
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 9.8e-87 324.7 378 50.5
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 4.8e-86 322.4 327 51.1
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 1.3e-83 314.3 364 50.8
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 2.3e-83 313.5 352 48.9
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 5.0e-83 312.4 392 46.9
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.9e-82 310.5 316 51.6
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 3.3e-82 309.7 235 65.1
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 1.0e-80 304.7 302 51.3
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 5.2e-80 302.4 329 46.5
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 1.5e-79 300.8 246 59.3
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 8.3e-78 295.0 397 46.1
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 6.1e-73 278.9 395 40.3
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 2.2e-70 270.4 225 60.0
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 3.7e-70 269.6 251 55.4
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 9.2e-69 265.0 351 41.3
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 1.2e-60 238.0 372 39.0
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 3.5e-60 236.5 195 63.1
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 1.6e-52 211.1 174 60.9
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 1.1e-48 198.4 282 42.6
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 5.8e-47 192.6 245 48.6
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 7.1e-45 185.7 194 50.0
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 3.0e-43 180.3 179 48.6
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 1.6e-41 174.5 325 34.8
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 1.6e-41 174.5 314 37.3
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 8.1e-41 172.2 241 39.0
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 1.3e-38 164.9 151 55.6
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 6.4e-38 162.5 270 37.0
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 4.2e-37 159.8 182 49.5
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.7e-35 154.5 295 34.2
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 2.3e-35 154.1 252 36.1
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 3.0e-35 153.7 268 35.8
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 6.6e-35 152.5 260 36.9
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 2.5e-34 150.6 200 45.0
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 2.6e-31 140.6 151 48.3
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 2.2e-30 137.5 147 49.7
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 8.4e-30 135.6 295 31.2
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.1e-29 135.2 140 50.0
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 2.1e-28 131.0 233 33.9
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 4.0e-24 116.7 166 41.0
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 8.7e-19 99.0 204 30.9
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 5.3e-16 89.7 129 39.5
Atru.chr2.2423 Acer truncatum HOM05D006259 ORTHO05D007804 7.4e-10 69.3 114 42.1


User provided reference genes

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