Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 0.0e+00 1448.3 789 100.0
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 1.0e-196 691.0 787 58.3
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 5.7e-187 658.7 796 55.4
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 8.2e-186 654.8 835 52.2
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 1.3e-175 620.9 829 50.9
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 1.2e-157 561.2 908 44.9
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 4.0e-156 556.2 901 45.6
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 6.8e-156 555.4 836 47.6
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 1.3e-154 551.2 908 44.7
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 4.9e-154 549.3 918 43.1
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.4e-153 547.7 890 42.9
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 4.1e-153 546.2 890 42.9
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 5.4e-153 545.8 890 44.8
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 1.2e-152 544.7 902 43.5
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 2.1e-152 543.9 890 44.7
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.7e-152 543.5 908 44.1
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 3.5e-152 543.1 908 43.9
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 6.6e-151 538.9 905 42.9
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 1.5e-150 537.7 913 45.6
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 2.5e-150 537.0 911 44.8
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 4.7e-149 532.7 904 45.1
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 8.1e-149 531.9 890 46.2
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 5.2e-148 529.3 899 44.6
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 8.9e-148 528.5 898 43.9
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 5.8e-147 525.8 906 44.0
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 8.3e-146 521.9 908 44.2
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 8.3e-146 521.9 908 44.2
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 8.3e-146 521.9 901 43.3
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 1.9e-145 520.8 897 46.4
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 7.1e-145 518.8 887 44.0
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 9.2e-145 518.5 893 46.0
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 2.1e-144 517.3 790 48.1
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 3.5e-144 516.5 900 42.8
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 4.6e-144 516.2 907 42.7
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 5.1e-143 512.7 868 46.0
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 2.5e-142 510.4 894 43.3
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 1.8e-140 504.2 896 44.4
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 2.4e-140 503.8 913 43.3
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 1.2e-139 501.5 894 41.7
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 1.3e-138 498.0 897 43.1
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 1.7e-138 497.7 732 48.6
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 2.2e-138 497.3 819 45.1
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.1e-137 495.0 890 41.8
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 1.9e-137 494.2 895 41.9
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 3.2e-137 493.4 902 46.3
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 7.1e-137 492.3 848 43.6
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 3.0e-135 486.9 905 42.3
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 3.9e-135 486.5 897 43.3
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 5.1e-135 486.1 899 44.4
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 1.5e-134 484.6 873 44.0
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 1.6e-133 481.1 888 43.9
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 6.2e-133 479.2 911 40.9
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 1.1e-132 478.4 904 42.8
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.8e-132 477.6 916 42.1
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 3.1e-132 476.9 899 43.7
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 6.9e-132 475.7 894 42.5
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 9.0e-132 475.3 861 41.0
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 1.2e-131 474.9 898 42.8
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 1.5e-131 474.6 900 41.3
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 2.0e-131 474.2 914 41.5
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 2.0e-131 474.2 902 39.0
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 2.6e-131 473.8 920 43.3
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 3.4e-131 473.4 920 43.3
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 4.4e-131 473.0 879 45.5
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 5.8e-131 472.6 912 40.8
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 5.8e-131 472.6 908 41.0
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 5.8e-131 472.6 880 42.7
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 7.6e-131 472.2 908 42.6
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 1.3e-130 471.5 879 45.6
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 1.3e-130 471.5 900 41.6
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 2.2e-130 470.7 912 40.7
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 2.2e-130 470.7 879 45.5
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.9e-130 470.3 864 43.9
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 3.8e-130 469.9 870 42.0
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 8.4e-130 468.8 904 41.2
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 2.4e-129 467.2 912 40.9
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 3.2e-129 466.8 859 42.7
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 3.2e-129 466.8 861 43.6
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 3.2e-129 466.8 898 42.9
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 5.4e-129 466.1 864 43.5
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 2.7e-128 463.8 863 42.8
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 6.0e-128 462.6 859 42.3
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 7.8e-128 462.2 897 41.8
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 1.3e-127 461.5 864 43.4
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 3.0e-127 460.3 901 42.8
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.5e-126 457.2 862 46.1
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 2.5e-126 457.2 913 40.6
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 5.6e-126 456.1 911 40.5
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 5.6e-126 456.1 867 42.2
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 1.3e-125 454.9 907 41.3
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 3.6e-125 453.4 910 38.2
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 3.6e-125 453.4 855 42.7
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 6.9e-124 449.1 743 45.1
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 2.0e-123 447.6 873 40.4
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 2.6e-123 447.2 745 45.5
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 9.9e-123 445.3 848 43.8
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 1.3e-122 444.9 899 40.2
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.3e-122 444.9 798 44.2
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 3.8e-122 443.4 829 45.4
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 6.4e-122 442.6 907 40.9
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 8.4e-122 442.2 886 41.9
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.8e-119 434.5 891 40.2
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 6.7e-119 432.6 898 40.2
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 1.8e-116 424.5 840 43.1
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 2.0e-115 421.0 899 39.6
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.6e-115 420.6 778 42.2
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 4.5e-115 419.9 850 40.8
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 9.9e-115 418.7 879 42.0
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 8.4e-114 415.6 821 41.7
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 3.2e-113 413.7 902 37.0
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 6.0e-112 409.5 819 40.8
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 3.9e-111 406.8 783 38.1
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 3.9e-111 406.8 906 38.1
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 8.7e-111 405.6 918 40.5
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 7.4e-110 402.5 827 36.5
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 2.8e-109 400.6 782 39.4
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 1.2e-107 395.2 756 42.3
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 1.2e-107 395.2 817 40.1
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 1.5e-107 394.8 821 40.2
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 1.7e-106 391.3 903 39.6
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 3.8e-106 390.2 894 40.2
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 4.9e-106 389.8 861 38.0
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 4.2e-105 386.7 897 37.7
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 1.2e-104 385.2 829 39.8
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 1.6e-104 384.8 832 40.5
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 2.7e-104 384.0 798 38.7
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 2.7e-104 384.0 798 38.7
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 4.6e-104 383.3 840 40.4
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 1.0e-103 382.1 836 40.1
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 1.3e-103 381.7 815 39.3
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 2.3e-103 380.9 704 40.9
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 8.7e-103 379.0 643 47.7
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 1.5e-102 378.3 800 40.1
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 1.5e-102 378.3 837 40.1
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 1.3e-101 375.2 836 39.2
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 1.3e-101 375.2 838 38.5
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 2.2e-101 374.4 838 38.9
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 8.5e-98 362.5 809 38.3
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 8.8e-95 352.4 747 37.9
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 5.9e-91 339.7 788 37.1
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.1e-89 335.5 737 41.1
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 3.2e-89 334.0 861 39.5
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 1.3e-85 322.0 793 38.3
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 1.5e-83 315.1 745 38.9
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 7.2e-81 306.2 847 34.7
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 2.7e-80 304.3 818 35.7
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 3.9e-79 300.4 453 47.0
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 1.1e-76 292.4 833 35.5
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 1.2e-75 288.9 716 38.5
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 2.2e-74 284.6 841 33.9
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 1.9e-73 281.6 871 37.0
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.7e-72 277.7 742 34.8
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 8.0e-72 276.2 278 56.1
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 7.0e-68 263.1 710 36.9
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 9.1e-68 262.7 778 34.6
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 9.4e-65 252.7 858 34.1
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 2.7e-64 251.1 846 33.8
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 2.7e-64 251.1 729 35.9
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 4.7e-64 250.4 843 34.9
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 6.1e-64 250.0 763 36.0
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 8.0e-64 249.6 836 32.7
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 3.6e-56 224.2 633 34.4
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 7.5e-54 216.5 963 30.5
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 4.5e-51 207.2 841 31.4
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 1.0e-50 206.1 348 39.4
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 3.6e-48 197.6 358 37.7
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 3.4e-46 191.0 295 39.0
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 2.4e-44 184.9 332 39.2
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 2.4e-44 184.9 296 39.9
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 1.8e-39 168.7 97 87.6
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 7.5e-38 163.3 173 54.9
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 3.2e-36 157.9 233 42.1
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 3.2e-36 157.9 267 40.8
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 5.4e-36 157.1 234 43.6
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 5.1e-34 150.6 638 36.8
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 2.2e-29 135.2 228 39.9
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 1.2e-27 129.4 453 30.7
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 2.6e-22 111.7 59 93.2
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 6.4e-21 107.1 364 29.1
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 2.1e-16 92.0 273 39.2
Lsat_1_v5_gn_8_98160 Lactuca sativa HOM05D004503 ORTHO05D005460 2.4e-15 88.6 90 57.8
Lsat_1_v5_gn_4_11100 Lactuca sativa HOM05D004503 ORTHO05D004285 1.2e-14 86.3 90 56.7
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 2.9e-13 81.6 220 30.9
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 6.4e-13 80.5 169 37.9


User provided reference genes

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