Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 0.0e+00 1312.0 654 100.0
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 7.9e-283 976.9 660 77.3
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 1.3e-282 976.1 665 76.7
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 7.7e-238 827.4 665 66.5
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 4.4e-233 811.6 670 64.9
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 2.1e-227 792.7 673 63.9
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 1.2e-225 786.9 667 65.1
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 2.8e-224 782.3 670 63.3
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 6.1e-219 764.6 673 61.5
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 1.0e-218 763.8 664 64.3
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 3.1e-215 752.3 678 61.1
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 7.0e-215 751.1 676 61.1
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 7.0e-215 751.1 686 60.2
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 7.8e-214 747.7 675 61.5
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.9e-213 745.7 676 62.1
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 5.0e-213 745.0 666 61.6
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 5.0e-213 745.0 674 61.9
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 6.6e-213 744.6 653 61.7
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 2.5e-212 742.7 670 61.2
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 3.3e-212 742.3 661 62.2
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 1.2e-211 740.3 672 61.8
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 1.2e-211 740.3 682 60.1
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.1e-211 739.6 676 61.7
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 4.7e-211 738.4 686 61.5
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 4.7e-211 738.4 663 61.2
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 6.1e-211 738.0 665 62.3
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 6.1e-211 738.0 671 60.8
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 6.1e-211 738.0 677 60.9
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 4.0e-210 735.3 671 61.4
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 4.0e-210 735.3 674 61.0
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 5.2e-210 734.9 676 61.4
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 2.0e-209 733.0 677 59.5
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 2.6e-209 732.6 671 59.8
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 3.4e-209 732.3 672 61.2
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 9.8e-209 730.7 670 61.0
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 9.8e-209 730.7 660 60.5
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 2.2e-208 729.6 660 60.2
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 4.9e-208 728.4 586 66.6
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 8.3e-208 727.6 672 60.6
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 1.4e-207 726.9 663 59.9
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 1.6e-206 723.4 670 60.0
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 1.6e-206 723.4 668 60.6
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 2.7e-206 722.6 673 60.6
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 3.5e-206 722.2 649 61.6
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 1.1e-204 717.2 673 59.0
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 1.1e-204 717.2 674 60.4
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 1.1e-204 717.2 672 60.3
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 2.5e-204 716.1 669 60.2
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 5.6e-204 714.9 660 59.5
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 2.8e-203 712.6 669 60.5
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 3.1e-202 709.1 662 58.9
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 1.5e-201 706.8 669 59.2
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 9.8e-201 704.1 661 58.2
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.3e-200 703.7 676 60.1
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 2.2e-200 703.0 658 59.0
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 6.4e-200 701.4 669 59.0
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 2.4e-199 699.5 709 57.3
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 3.2e-199 699.1 656 58.4
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 4.1e-199 698.7 674 57.9
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 2.7e-198 696.0 680 56.9
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 7.8e-198 694.5 659 58.9
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 7.8e-198 694.5 691 58.5
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 3.0e-197 692.6 654 59.0
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 8.6e-197 691.0 676 57.4
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 1.5e-196 690.3 678 58.0
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 3.3e-196 689.1 661 57.9
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 3.3e-196 689.1 602 62.0
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 4.3e-196 688.7 680 56.9
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 1.2e-195 687.2 673 57.7
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 2.1e-195 686.4 684 57.0
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 2.1e-195 686.4 675 56.7
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 8.1e-195 684.5 686 57.1
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 1.1e-194 684.1 684 57.0
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 2.3e-194 682.9 685 56.1
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 5.2e-194 681.8 660 58.0
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 1.3e-192 677.2 684 57.3
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 3.7e-192 675.6 679 57.3
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 1.1e-191 674.1 661 57.8
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 1.1e-191 674.1 671 55.6
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 1.9e-191 673.3 659 57.5
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 2.4e-191 672.9 681 56.8
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 1.0e-189 667.5 667 56.2
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 6.6e-189 664.8 673 56.2
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 4.3e-188 662.1 672 56.2
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 1.2e-187 660.6 682 56.3
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 3.6e-187 659.1 676 55.2
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 4.7e-187 658.7 677 54.9
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 8.1e-187 657.9 669 55.3
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 8.1e-187 657.9 671 55.9
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 4.0e-186 655.6 669 55.0
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 2.9e-184 649.4 672 55.1
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 1.2e-182 644.0 671 54.4
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 1.5e-180 637.1 646 55.1
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 4.3e-180 635.6 720 52.2
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 7.3e-180 634.8 655 55.4
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 1.6e-179 633.6 687 53.7
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 2.9e-176 622.9 678 53.8
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 5.4e-175 618.6 702 51.9
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 1.6e-174 617.1 692 51.4
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 3.5e-174 615.9 673 52.0
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 5.6e-172 608.6 679 52.9
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 9.6e-172 607.8 661 53.1
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 8.1e-171 604.7 694 51.3
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 1.8e-170 603.6 675 51.3
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 5.8e-169 598.6 666 53.0
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 1.7e-168 597.0 670 52.1
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 4.2e-167 592.4 674 51.8
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 6.0e-166 588.6 690 51.7
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 1.5e-164 583.9 704 50.0
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 5.6e-164 582.0 703 50.2
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 1.1e-162 577.8 600 54.2
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 4.0e-162 575.9 638 52.0
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 9.0e-162 574.7 504 61.5
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 4.5e-161 572.4 644 51.2
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 4.9e-160 568.9 672 50.4
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 3.2e-159 566.2 641 50.5
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 1.3e-157 560.8 679 50.5
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 2.5e-156 556.6 518 59.8
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 2.6e-153 546.6 721 46.5
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 8.4e-152 541.6 642 49.7
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 1.4e-151 540.8 665 48.7
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 1.6e-150 537.3 509 57.6
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 1.3e-149 534.3 640 51.9
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 2.5e-148 530.0 656 48.2
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 2.1e-142 510.4 684 45.8
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 2.2e-139 500.4 498 56.4
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 5.3e-138 495.7 683 44.9
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.0e-137 493.8 591 48.7
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 1.9e-135 487.3 665 46.0
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 8.2e-131 471.9 679 44.3
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 8.2e-131 471.9 546 52.2
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 2.9e-128 463.4 533 52.5
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 3.0e-125 453.4 461 57.3
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 1.7e-123 447.6 498 53.2
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 5.5e-119 432.6 440 56.1
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 2.0e-113 414.1 655 42.9
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 2.0e-113 414.1 449 54.1
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 5.5e-111 406.0 566 45.4
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 2.7e-110 403.7 707 39.5
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 9.8e-108 395.2 700 39.4
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 3.7e-107 393.3 717 39.6
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 5.0e-104 382.9 484 48.8
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.5e-103 381.3 592 42.6
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 3.6e-102 376.7 322 61.2
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 3.0e-101 373.6 253 77.5
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 1.3e-99 368.2 561 44.0
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 2.6e-92 344.0 358 54.7
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.6e-86 323.6 278 60.1
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 1.2e-84 318.5 787 32.1
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 1.9e-82 311.2 714 35.9
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 5.1e-80 303.1 407 44.7
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 2.8e-78 297.4 284 56.0
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 1.7e-67 261.5 259 58.3
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 8.7e-64 249.2 616 33.1
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 1.9e-63 248.1 683 31.5
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.1e-61 240.7 361 42.4
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 7.6e-60 236.1 409 41.6
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 6.4e-59 233.0 323 43.0
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 7.9e-49 199.5 208 55.3
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 6.9e-45 186.4 217 52.5
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 3.0e-40 171.0 708 26.8
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 7.4e-39 166.4 245 40.0
Lj8A171G43 Lonicera japonica HOM05D003691 ORTHO05D004288 1.3e-30 139.0 146 52.1
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 1.6e-30 138.7 163 50.3
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 3.4e-20 104.4 61 85.2
C04p62090 Brassica napus HOM05D003691 ORTHO05D004288 2.9e-19 101.3 127 49.6
SEGI_16706 Sequoiadendron giganteum HOM05D003691 ORTHO05D017750 7.2e-18 96.7 109 52.3
ATR0772G025 Amborella trichopoda HOM05D003691 ORTHO05D004288 2.3e-16 91.7 104 46.2
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 3.9e-16 90.9 87 50.6
Lj8A127T49 Lonicera japonica HOM05D003691 ORTHO05D004288 2.0e-15 88.6 76 65.8
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 2.6e-15 88.2 83 54.2
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 2.2e-14 85.1 67 59.7
EL10Ac4g08622 Beta vulgaris HOM05D003691 ORTHO05D019836 3.1e-13 81.3 160 33.1
SHI10371 Sapria himalayana HOM05D003691 ORTHO05D004288 1.2e-12 79.3 90 53.3
SEGI_15855 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 2.0e-12 78.6 105 44.8
Rhsim07G0255900 Rhododendron simsii HOM05D000234 ORTHO05D004288 4.5e-12 77.4 114 42.1
FAN16G1928 Fragaria x ananassa HOM05D003691 ORTHO05D004288 5.0e-11 73.9 78 52.6
Actinidia03601 Actinidia chinensis HOM05D003691 ORTHO05D004288 2.1e-09 68.6 44 79.5
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 6.1e-09 67.0 41 75.6
MD17G1101200 Malus domestica HOM05D003691 ORTHO05D004288 8.0e-09 66.6 92 40.2
Glyma.13G310451 Glycine max HOM05D003691 ORTHO05D004288 2.6e-07 61.6 52 55.8
MD17G1101000 Malus domestica HOM05D003691 ORTHO05D004288 3.3e-07 61.2 46 56.5
TPR.G2961 Trifolium pratense HOM05D001978 ORTHO05D003036 5.7e-07 60.5 55 54.5
TPR.G35222 Trifolium pratense HOM05D003691 ORTHO05D004288 2.8e-06 58.2 60 50.0


User provided reference genes

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