Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G0930 Erigeron canadensis HOM05D004060 ORTHO05D001964 1.1e-72 277.3 246 100.0
HanXRQChr05g0132091 Helianthus annuus HOM05D004060 ORTHO05D004967 1.5e-16 90.9 246 52.4
Lsat_1_v5_gn_9_27220 Lactuca sativa HOM05D004060 ORTHO05D004967 3.1e-14 83.2 167 50.9
ECA247G2970 Erigeron canadensis HOM05D004060 ORTHO05D004967 2.0e-13 80.5 171 44.4
ECA247G3737 Erigeron canadensis HOM05D003799 ORTHO05D001964 4.5e-13 79.3 120 52.5
HanXRQChr10g0300061 Helianthus annuus HOM05D004060 ORTHO05D004967 6.4e-12 75.5 120 49.2
Manes.08G049300 Manihot esculenta HOM05D004060 ORTHO05D004967 2.1e-10 70.5 143 74.8
TAR369G1158 Trochodendron aralioides HOM05D004060 ORTHO05D004967 2.1e-10 70.5 147 71.4
TAR057G0003 Trochodendron aralioides HOM05D004060 ORTHO05D004967 3.5e-10 69.7 179 65.4
Dinv02133 Davidia involucrata HOM05D004060 ORTHO05D004967 4.6e-10 69.3 178 65.2
Oeu064312.1 Olea europaea HOM05D004060 ORTHO05D004967 4.6e-10 69.3 154 51.3
TWI74G0684 Tripterygium wilfordii HOM05D004060 ORTHO05D004967 6.0e-10 68.9 140 73.6
QL07p021067 Quercus lobata HOM05D004060 ORTHO05D004967 7.9e-10 68.6 180 61.7
Cpa.g.sc92.28 Carica papaya HOM05D004060 ORTHO05D004967 1.0e-09 68.2 169 43.8
ECA248G2911 Erigeron canadensis HOM05D004060 ORTHO05D004967 1.0e-09 68.2 176 61.4
VMungo1383G2713 Vigna mungo HOM05D004060 ORTHO05D004967 1.3e-09 67.8 184 60.3
Rhsim03G0018200 Rhododendron simsii HOM05D004060 ORTHO05D004967 1.8e-09 67.4 183 60.7
SalBow6G3128 Salvia bowleyana HOM05D004060 ORTHO05D004967 1.8e-09 67.4 253 50.6
Prupe.7G064800 Prunus persica HOM05D004060 ORTHO05D004967 2.3e-09 67.0 189 59.8
Oeu017953.1 Olea europaea HOM05D004060 ORTHO05D004967 3.0e-09 66.6 142 53.5
TWI53G1485 Tripterygium wilfordii HOM05D004060 ORTHO05D004967 3.0e-09 66.6 139 75.5
Eucgr.A02379 Eucalyptus grandis HOM05D004060 ORTHO05D004967 3.9e-09 66.2 184 59.2
MSTRG.6438 Avicennia marina HOM05D004060 ORTHO05D004967 5.1e-09 65.9 175 62.9
Duzib128G1686 Durio zibethinus HOM05D004060 ORTHO05D004967 6.7e-09 65.5 161 59.0
HanXRQChr01g0008631 Helianthus annuus HOM05D004060 ORTHO05D004967 6.7e-09 65.5 179 62.6
Potri.016G054400 Populus trichocarpa HOM05D004060 ORTHO05D004967 6.7e-09 65.5 176 63.6
PGSC0003DMG400027238 Solanum tuberosum HOM05D004060 ORTHO05D004967 6.7e-09 65.5 139 70.5
CANSAT80G2886 Cannabis sativa HOM05D004060 ORTHO05D004967 8.7e-09 65.1 120 82.5
Hma1.2p1_0696F.1_g204640 Hydrangea macrophylla HOM05D004060 ORTHO05D004967 8.7e-09 65.1 150 72.0
Solyc04g015520.3 Solanum lycopersicum HOM05D004060 ORTHO05D004967 8.7e-09 65.1 141 70.2
Sopen04g007590 Solanum pennellii HOM05D004060 ORTHO05D004967 8.7e-09 65.1 139 71.9
TWI77G1037 Tripterygium wilfordii HOM05D004060 ORTHO05D004967 8.7e-09 65.1 143 74.1
CSS0022151 Camellia sinensis var. sinensis HOM05D004060 ORTHO05D004967 1.1e-08 64.7 174 62.6
Migut.J01771 Erythranthe guttata HOM05D004060 ORTHO05D004967 1.1e-08 64.7 175 62.9
PGR004G1680 Punica granatum HOM05D004060 ORTHO05D004967 1.5e-08 64.3 144 65.3
FAN02G3665 Fragaria x ananassa HOM05D004060 ORTHO05D004967 1.9e-08 63.9 140 71.4
FAN05G0004 Fragaria x ananassa HOM05D004060 ORTHO05D004967 1.9e-08 63.9 140 71.4
FAN05G5649 Fragaria x ananassa HOM05D004060 ORTHO05D004967 1.9e-08 63.9 140 71.4
FAN09G1680 Fragaria x ananassa HOM05D004060 ORTHO05D004967 1.9e-08 63.9 140 71.4
Oeu033785.1 Olea europaea HOM05D004060 ORTHO05D004967 1.9e-08 63.9 167 59.9
FvH4_6g23510 Fragaria vesca HOM05D004060 ORTHO05D004967 2.5e-08 63.5 155 69.0
FAN14G3078 Fragaria x ananassa HOM05D004060 ORTHO05D004967 2.5e-08 63.5 155 69.0
Nitab4.5_0002841g0040 Nicotiana tabacum HOM05D004060 ORTHO05D004967 3.3e-08 63.2 174 63.2
Cfa016842 Carpinus fangiana HOM05D004060 ORTHO05D004967 4.3e-08 62.8 117 78.6
Lsat_1_v5_gn_5_162320 Lactuca sativa HOM05D004060 ORTHO05D004967 4.3e-08 62.8 177 62.1
RcHm_v2.0_Chr3g0481501 Rosa chinensis HOM05D004060 ORTHO05D004967 4.3e-08 62.8 117 79.5
Sabra06G0037600 Salix brachista HOM05D004060 ORTHO05D004967 4.3e-08 62.8 165 67.3
CARHR167760 Cardamine hirsuta HOM05D004060 ORTHO05D004967 5.6e-08 62.4 143 72.0
MD14G1069500 Malus domestica HOM05D004060 ORTHO05D004967 5.6e-08 62.4 117 80.3
Manes.09G024700 Manihot esculenta HOM05D004060 ORTHO05D004967 5.6e-08 62.4 117 84.6
vmacro22363 Vaccinium macrocarpon HOM05D004060 ORTHO05D004967 5.6e-08 62.4 176 59.1
Haze_19884 Corylus avellana HOM05D004060 ORTHO05D004967 7.4e-08 62.0 117 78.6
Haze_19892 Corylus avellana HOM05D004060 ORTHO05D004967 7.4e-08 62.0 117 78.6
TPR.G21399 Trifolium pratense HOM05D004060 ORTHO05D004967 7.4e-08 62.0 117 82.9
Nitab4.5_0001663g0020 Nicotiana tabacum HOM05D004060 ORTHO05D004967 9.6e-08 61.6 173 63.0
Phvul.001G135500 Phaseolus vulgaris HOM05D004060 ORTHO05D004967 9.6e-08 61.6 91 40.7
Potri.006G053200 Populus trichocarpa HOM05D004060 ORTHO05D004967 9.6e-08 61.6 164 65.2
CiPaw.09G036400 Carya illinoinensis HOM05D004060 ORTHO05D004967 1.3e-07 61.2 117 84.6
DCAR_013590 Daucus carota HOM05D004060 ORTHO05D004967 1.3e-07 61.2 150 70.0
Gohir.A11G312000 Gossypium hirsutum HOM05D004060 ORTHO05D004967 1.3e-07 61.2 116 85.3
Gohir.A11G312100 Gossypium hirsutum HOM05D004060 ORTHO05D004967 1.3e-07 61.2 116 85.3
Gohir.D11G328600 Gossypium hirsutum HOM05D004060 ORTHO05D004967 1.3e-07 61.2 116 85.3
Gorai.007G359900 Gossypium raimondii HOM05D004060 ORTHO05D004967 1.3e-07 61.2 116 85.3
Actinidia09345 Actinidia chinensis HOM05D004060 ORTHO05D004967 1.6e-07 60.8 178 64.0
Ciclev10005594m.g Citrus clementina HOM05D004060 ORTHO05D004967 1.6e-07 60.8 142 73.2
Dinv02134 Davidia involucrata HOM05D004060 ORTHO05D004967 1.6e-07 60.8 172 60.5
MBI02_g05658_MAGBIO Magnolia biondii HOM05D004060 ORTHO05D004967 1.6e-07 60.8 163 46.0
Sopen10g030840 Solanum pennellii HOM05D004060 ORTHO05D004967 1.6e-07 60.8 149 68.5
EL10Ac3g07036 Beta vulgaris HOM05D004060 ORTHO05D004967 2.1e-07 60.5 117 79.5
Cc06_g16910 Coffea canephora HOM05D004060 ORTHO05D004967 2.1e-07 60.5 180 60.6
HanXRQChr10g0300071 Helianthus annuus HOM05D004060 ORTHO05D004967 2.1e-07 60.5 119 83.2
Lju124C36T16 Lonicera japonica HOM05D004060 ORTHO05D004967 2.1e-07 60.5 100 41.0
Medtr1g052560 Medicago truncatula HOM05D004060 ORTHO05D004967 2.1e-07 60.5 152 62.5
Phvul.007G253600 Phaseolus vulgaris HOM05D004060 ORTHO05D004967 2.1e-07 60.5 141 71.6
arahy.Tifrunner.gnm1.ann1.L89JBM Arachis hypogaea HOM05D004060 ORTHO05D004967 2.8e-07 60.1 155 67.7
A05p02610 Brassica napus HOM05D004060 ORTHO05D004967 3.7e-07 59.7 177 56.5
BraA05t19254Z Brassica rapa HOM05D004060 ORTHO05D004967 3.7e-07 59.7 177 56.5
CAN.G676.50 Capsicum annuum HOM05D004060 ORTHO05D004967 3.7e-07 59.7 129 77.5
MD12G1072300 Malus domestica HOM05D004060 ORTHO05D004967 3.7e-07 59.7 114 85.1
CiPaw.10G032000 Carya illinoinensis HOM05D004060 ORTHO05D004967 4.8e-07 59.3 117 85.5
Ca_26888_v3 Cicer arietinum L. HOM05D004060 ORTHO05D004967 4.8e-07 59.3 117 82.1
Ca_29692_v3 Cicer arietinum L. HOM05D004060 ORTHO05D004967 4.8e-07 59.3 117 82.1
COL.COLO4_28207 Corchorus olitorius HOM05D004060 ORTHO05D004967 4.8e-07 59.3 117 83.8
Lj2C380T14 Lonicera japonica HOM05D004060 ORTHO05D004967 4.8e-07 59.3 98 41.8
Lj1g0010539 Lotus japonicus HOM05D004060 ORTHO05D004967 4.8e-07 59.3 117 82.9
Nitab4.5_0001509g0060 Nicotiana tabacum HOM05D004060 ORTHO05D004967 4.8e-07 59.3 173 63.6
Thecc.05G159200 Theobroma cacao HOM05D004060 ORTHO05D004967 4.8e-07 59.3 162 65.4
Glyma.10G099400 Glycine max HOM05D004060 ORTHO05D004967 6.2e-07 58.9 116 82.8
Nitab4.5_0000733g0190 Nicotiana tabacum HOM05D004060 ORTHO05D004967 6.2e-07 58.9 173 61.8
PGSC0003DMG400023721 Solanum tuberosum HOM05D004060 ORTHO05D004967 6.2e-07 58.9 119 79.8
TAR633G1984 Trochodendron aralioides HOM05D004060 ORTHO05D004967 6.2e-07 58.9 174 58.6
MSTRG.10823 Avicennia marina HOM05D004060 ORTHO05D004967 8.1e-07 58.5 157 44.6
Sed0004660 Sechium edule HOM05D004060 ORTHO05D004967 8.1e-07 58.5 147 68.7
C04p03110 Brassica napus HOM05D004060 ORTHO05D004967 1.1e-06 58.2 177 44.1
BolC4t21952H Brassica oleracea HOM05D004060 ORTHO05D004967 1.1e-06 58.2 177 44.1
DCAR_020477 Daucus carota HOM05D004060 ORTHO05D004967 1.4e-06 57.8 38 76.3
Duzib106G1229 Durio zibethinus HOM05D004060 ORTHO05D004967 1.4e-06 57.8 117 83.8
Solyc10g080230.2 Solanum lycopersicum HOM05D004060 ORTHO05D004967 1.4e-06 57.8 40 67.5
THA.LOC104824453 Tarenaya hassleriana HOM05D004060 ORTHO05D004967 1.4e-06 57.8 119 82.4
CAN.G128.15 Capsicum annuum HOM05D004060 ORTHO05D004967 1.8e-06 57.4 117 82.1
Duzib093G0278 Durio zibethinus HOM05D004060 ORTHO05D004967 1.8e-06 57.4 38 73.7
Peaxi162Scf00493g00316 Petunia axillaris HOM05D004060 ORTHO05D004967 1.8e-06 57.4 113 35.4
AL5G39120 Arabidopsis lyrata HOM05D004060 ORTHO05D004967 2.4e-06 57.0 173 61.3
SGA_v2.0_scaffold69G23102 Striga asiatica HOM05D004060 ORTHO05D004967 2.4e-06 57.0 94 38.3
VMungo0720G0143 Vigna mungo HOM05D004060 ORTHO05D004967 2.4e-06 57.0 116 82.8
BcaB02g07595 Brassica carinata HOM05D004060 ORTHO05D004967 3.1e-06 56.6 128 68.0
Glyma.02G182600 Glycine max HOM05D004060 ORTHO05D004967 3.1e-06 56.6 116 82.8
Lalb_Chr25g0287361 Lupinus albus HOM05D004060 ORTHO05D004967 3.1e-06 56.6 145 68.3
Nn2g15346 Nelumbo nucifera HOM05D004060 ORTHO05D004967 3.1e-06 56.6 75 45.3
PSO339G1536 Papaver somniferum HOM05D004060 ORTHO05D004967 3.1e-06 56.6 116 74.1
BcaNung07195 Brassica carinata HOM05D004060 ORTHO05D004967 4.0e-06 56.2 117 74.4
ClCG10G016620 Citrullus lanatus HOM05D004060 ORTHO05D004967 4.0e-06 56.2 144 69.4
Hma1.2p1_0247F.1_g101840 Hydrangea macrophylla HOM05D004060 ORTHO05D004967 4.0e-06 56.2 145 69.0
arahy.Tifrunner.gnm1.ann1.N3K66E Arachis hypogaea HOM05D003004 ORTHO05D004967 5.3e-06 55.8 38 71.1
MSTRG.19874 Avicennia marina HOM05D004060 ORTHO05D004967 5.3e-06 55.8 132 67.4
Ca_08471_v3 Cicer arietinum L. HOM05D004060 ORTHO05D004967 6.9e-06 55.5 62 48.4
Glyma.19G141100 Glycine max HOM05D004060 ORTHO05D004967 6.9e-06 55.5 165 61.2
TPR.G3730 Trifolium pratense HOM05D004060 ORTHO05D004967 9.0e-06 55.1 152 67.8


User provided reference genes

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