Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 1.5e-248 862.4 445 100.0
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 3.6e-194 681.8 435 75.9
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 9.1e-190 667.2 433 76.0
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 1.2e-170 603.6 371 77.4
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 9.5e-147 524.2 430 61.9
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 2.0e-144 516.5 418 61.7
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 5.8e-144 515.0 428 59.8
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 2.9e-143 512.7 429 60.1
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 1.2e-141 507.3 428 60.7
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 1.0e-140 504.2 434 60.8
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 5.0e-140 501.9 427 57.6
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 1.5e-139 500.4 419 61.6
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 2.3e-137 493.0 463 55.9
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 8.9e-137 491.1 420 59.5
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 3.4e-136 489.2 419 60.1
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 4.4e-136 488.8 430 58.8
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 2.9e-135 486.1 417 58.8
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 4.9e-135 485.3 429 56.2
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 3.5e-133 479.2 433 56.4
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 7.8e-133 478.0 384 61.7
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 1.0e-132 477.6 426 55.4
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 1.0e-132 477.6 429 56.9
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 3.0e-132 476.1 429 55.7
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 3.0e-132 476.1 426 58.9
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 6.6e-132 474.9 429 55.5
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 5.6e-131 471.9 461 58.1
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 5.6e-131 471.9 426 54.7
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 1.4e-129 467.2 432 55.6
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 2.3e-129 466.5 424 58.0
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 3.4e-128 462.6 431 56.1
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 1.3e-127 460.7 387 61.0
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 1.7e-127 460.3 434 53.9
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 2.9e-127 459.5 380 62.4
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 1.9e-126 456.8 381 61.2
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 2.7e-125 453.0 438 52.7
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 6.0e-125 451.8 431 52.7
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 7.8e-125 451.4 383 59.3
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 1.0e-124 451.1 427 53.4
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 2.3e-124 449.9 432 53.0
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 5.1e-124 448.7 431 52.9
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 1.9e-123 446.8 470 49.6
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 3.3e-123 446.0 431 52.7
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 1.2e-122 444.1 433 53.1
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 1.2e-122 444.1 433 53.1
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 2.1e-122 443.4 425 51.3
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 1.1e-121 441.0 433 54.5
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 1.1e-121 441.0 428 52.8
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 1.1e-121 441.0 433 53.3
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 5.2e-121 438.7 433 52.7
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 6.8e-121 438.3 426 51.2
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 1.2e-120 437.6 427 53.4
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 1.5e-120 437.2 376 57.4
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 1.5e-120 437.2 432 52.1
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 4.4e-120 435.6 414 53.4
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 7.6e-120 434.9 420 49.3
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 7.6e-120 434.9 433 52.0
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 1.3e-119 434.1 430 53.0
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 1.3e-119 434.1 424 51.4
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.7e-119 433.7 424 50.0
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 1.7e-119 433.7 414 53.4
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 2.2e-119 433.3 424 50.2
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 3.8e-119 432.6 437 52.2
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 4.9e-119 432.2 442 52.5
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 8.4e-119 431.4 414 53.6
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 1.1e-118 431.0 423 52.2
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 1.1e-118 431.0 424 50.0
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 1.1e-118 431.0 434 52.8
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 1.4e-118 430.6 433 51.5
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 1.4e-118 430.6 377 57.8
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 2.4e-118 429.9 453 54.1
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 1.0e-116 424.5 442 51.8
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 2.3e-116 423.3 433 50.8
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 3.0e-116 422.9 437 51.9
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 3.0e-116 422.9 376 58.5
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 8.7e-116 421.4 414 52.2
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 1.1e-115 421.0 433 50.6
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 4.3e-115 419.1 433 50.6
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 1.3e-114 417.5 428 52.3
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 2.1e-114 416.8 433 50.3
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 4.8e-114 415.6 433 50.1
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 4.8e-114 415.6 433 50.1
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 1.1e-113 414.5 374 58.6
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 3.1e-113 412.9 379 55.9
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 8.4e-111 404.8 502 45.2
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 4.6e-109 399.1 374 52.7
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 1.7e-108 397.1 452 48.9
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 4.3e-107 392.5 377 53.1
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 2.4e-105 386.7 476 45.2
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 2.6e-104 383.3 381 51.7
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 7.6e-104 381.7 399 51.9
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 4.2e-102 375.9 440 48.2
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 1.0e-100 371.3 425 47.1
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 1.9e-99 367.1 429 47.1
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 1.5e-96 357.5 434 46.1
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 2.0e-96 357.1 413 50.6
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 4.5e-96 355.9 446 45.7
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 7.6e-96 355.1 444 45.3
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 4.9e-95 352.4 430 46.5
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 6.5e-95 352.1 435 46.2
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 8.4e-95 351.7 351 51.6
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 7.9e-93 345.1 438 45.0
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 8.7e-92 341.7 438 44.7
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 1.1e-91 341.3 439 44.0
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 1.8e-89 334.0 439 43.3
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 4.0e-89 332.8 435 44.1
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 6.9e-89 332.0 305 53.4
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 9.0e-89 331.6 411 43.6
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 4.5e-88 329.3 385 48.1
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 3.5e-85 319.7 288 58.3
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 3.0e-84 316.6 421 43.9
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.1e-83 314.7 430 39.3
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 3.3e-83 313.2 277 56.0
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 7.4e-83 312.0 417 41.5
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.3e-82 311.2 443 38.1
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.1e-81 308.1 424 37.3
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 3.1e-81 306.6 449 41.6
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 2.6e-80 303.5 396 43.9
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 1.4e-76 291.2 420 38.8
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 1.5e-67 261.2 252 54.4
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 2.6e-67 260.4 351 43.0
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 2.2e-63 247.3 441 36.3
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.7e-61 240.4 390 35.1
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 2.2e-50 204.1 396 32.1
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 2.7e-45 187.2 285 41.8
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 1.3e-23 115.2 128 46.1
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 5.6e-22 109.8 151 43.0
SEGI_18115 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.9e-14 84.7 76 51.3
Cpa.g.sc211.21 Carica papaya HOM05D005756 ORTHO05D018916 8.4e-10 69.3 52 61.5
Dinv21288 Davidia involucrata HOM05D005756 ORTHO05D018916 2.4e-09 67.8 67 50.7
Hma1.2p1_0545F.1_g176010 Hydrangea macrophylla HOM05D005756 ORTHO05D018916 3.2e-09 67.4 51 58.8
DCAR_019685 Daucus carota HOM05D005756 ORTHO05D018916 2.1e-08 64.7 55 52.7
Lj1C795T1 Lonicera japonica HOM05D005756 ORTHO05D018916 3.5e-08 63.9 52 57.7
Oeu027645.1 Olea europaea HOM05D005756 ORTHO05D018916 3.0e-07 60.8 44 65.9
Solyc07g045560.1 Solanum lycopersicum HOM05D005756 ORTHO05D018916 4.3e-06 57.0 40 67.5
Sc21g0000680 Simmondsia chinensis HOM05D005756 ORTHO05D018916 9.6e-06 55.8 38 63.2


User provided reference genes

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