Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 3.1e-73 278.5 150 100.0
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 8.4e-47 190.7 139 73.4
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 4.2e-46 188.3 146 71.2
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 1.2e-45 186.8 142 71.1
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 1.2e-45 186.8 139 74.1
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 2.1e-45 186.0 145 70.3
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 2.1e-45 186.0 144 70.8
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 2.7e-45 185.7 139 69.1
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 2.7e-45 185.7 145 70.3
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 3.5e-45 185.3 144 70.1
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 3.5e-45 185.3 145 69.7
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 6.0e-45 184.5 145 67.6
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 6.0e-45 184.5 149 68.5
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 7.8e-45 184.1 149 67.8
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 7.8e-45 184.1 145 70.3
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 1.0e-44 183.7 144 70.1
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 8.7e-44 180.6 141 68.1
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 1.1e-43 180.3 145 64.8
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 1.5e-43 179.9 143 69.9
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 1.5e-43 179.9 141 67.4
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 1.5e-43 179.9 143 67.1
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 1.9e-43 179.5 143 67.1
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 1.9e-43 179.5 145 69.0
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 1.9e-43 179.5 144 63.9
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 4.3e-43 178.3 143 62.9
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 5.6e-43 177.9 148 65.5
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 5.6e-43 177.9 145 66.9
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 7.3e-43 177.6 143 65.0
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 9.6e-43 177.2 142 69.0
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 9.6e-43 177.2 145 64.1
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 9.6e-43 177.2 145 64.8
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 9.6e-43 177.2 143 67.1
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 1.3e-42 176.8 145 62.1
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.3e-42 176.8 145 66.2
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 1.3e-42 176.8 148 65.5
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 1.6e-42 176.4 143 62.9
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 1.6e-42 176.4 143 62.9
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 1.6e-42 176.4 145 62.1
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 1.6e-42 176.4 143 62.9
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 1.6e-42 176.4 145 62.1
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 1.6e-42 176.4 143 62.9
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 1.6e-42 176.4 143 65.7
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 1.6e-42 176.4 143 65.7
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 2.1e-42 176.0 143 62.9
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 2.8e-42 175.6 145 66.2
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.8e-42 175.6 145 66.2
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 3.6e-42 175.3 145 66.9
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 3.6e-42 175.3 145 66.9
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 3.6e-42 175.3 139 68.3
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 4.8e-42 174.9 145 61.4
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 4.8e-42 174.9 148 63.5
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 4.8e-42 174.9 143 62.2
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 6.2e-42 174.5 145 65.5
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 6.2e-42 174.5 142 62.7
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 8.1e-42 174.1 143 61.5
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 8.1e-42 174.1 144 63.2
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 8.1e-42 174.1 144 63.2
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 8.1e-42 174.1 146 65.1
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 8.1e-42 174.1 148 64.2
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 1.1e-41 173.7 145 64.1
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 1.1e-41 173.7 145 60.7
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.8e-41 172.9 145 64.8
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.8e-41 172.9 145 64.8
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 2.4e-41 172.6 143 62.2
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 2.4e-41 172.6 139 66.2
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 2.4e-41 172.6 139 66.2
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 4.0e-41 171.8 142 64.1
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 4.0e-41 171.8 144 63.2
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 5.3e-41 171.4 143 60.8
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 5.3e-41 171.4 148 64.2
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 5.3e-41 171.4 160 60.0
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 6.9e-41 171.0 142 63.4
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 1.5e-40 169.9 143 60.8
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 2.6e-40 169.1 131 71.0
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 1.7e-39 166.4 142 59.9
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 3.8e-39 165.2 139 62.6
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 6.4e-39 164.5 142 59.9
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 1.9e-38 162.9 149 62.4
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 1.9e-38 162.9 145 61.4
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 2.4e-38 162.5 137 64.2
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 2.4e-38 162.5 137 64.2
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 4.2e-38 161.8 138 62.3
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 2.1e-37 159.5 141 58.9
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 2.7e-37 159.1 142 57.7
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 3.5e-37 158.7 144 61.1
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 4.6e-37 158.3 142 57.0
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.3e-34 150.2 142 56.3
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 4.8e-34 148.3 145 57.2
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 6.2e-34 147.9 143 53.8
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 1.1e-33 147.1 143 58.7
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 1.4e-33 146.7 139 61.2
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 2.6e-32 142.5 142 52.1
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 4.5e-32 141.7 139 56.8
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 1.3e-31 140.2 144 54.2
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 6.4e-31 137.9 208 43.8
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 3.2e-30 135.6 135 51.1
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 4.2e-30 135.2 141 53.9
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 1.0e-28 130.6 104 66.3
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 3.0e-28 129.0 137 54.0
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 3.9e-28 128.6 136 56.6
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 5.6e-27 124.8 144 50.0
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 7.4e-27 124.4 135 46.7
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 9.6e-27 124.0 119 58.8
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 2.1e-26 122.9 101 68.3
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 4.8e-26 121.7 109 62.4
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 5.3e-25 118.2 139 48.9
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 5.3e-25 118.2 107 62.6
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 1.2e-24 117.1 144 47.9
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 1.2e-24 117.1 144 47.9
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 1.7e-23 113.2 107 59.8
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 2.9e-23 112.5 92 63.0
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 2.5e-22 109.4 108 59.3
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 5.5e-22 108.2 117 53.8
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 1.2e-21 107.1 143 44.8
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 1.6e-21 106.7 103 58.3
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.3e-20 102.8 106 53.8
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 8.7e-20 100.9 147 42.2
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 4.8e-18 95.1 80 63.8
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 5.3e-17 91.7 144 40.3
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 5.3e-17 91.7 144 40.3
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 1.2e-16 90.5 144 40.3
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 3.2e-14 82.4 67 61.2
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 2.7e-13 79.3 126 41.3
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 2.5e-11 72.8 141 35.5
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 1.4e-06 57.0 135 27.4


User provided reference genes

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