Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 1.1e-181 639.8 309 100.0
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 1.8e-168 595.9 314 92.7
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 4.4e-167 591.3 314 91.4
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 3.3e-162 575.1 316 87.3
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 3.4e-159 565.1 315 86.0
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 1.7e-158 562.8 314 85.4
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 1.7e-158 562.8 314 85.4
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 1.1e-157 560.1 314 84.7
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 1.4e-157 559.7 312 85.9
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 3.2e-157 558.5 314 84.4
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 3.2e-157 558.5 314 84.1
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 4.1e-157 558.1 315 84.1
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 5.4e-157 557.8 315 84.1
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 1.2e-156 556.6 312 84.9
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 2.0e-156 555.8 314 84.4
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 2.0e-156 555.8 314 84.4
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 2.0e-156 555.8 312 85.3
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 2.7e-156 555.4 316 84.2
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 3.5e-156 555.1 314 84.1
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 3.5e-156 555.1 312 84.6
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 3.5e-156 555.1 312 84.6
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 3.5e-156 555.1 312 84.9
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 5.9e-156 554.3 314 84.1
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 5.9e-156 554.3 314 83.8
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 1.3e-155 553.1 314 84.1
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 2.9e-155 552.0 314 83.1
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 2.5e-154 548.9 314 83.4
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.5e-154 548.9 311 83.6
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 2.5e-154 548.9 314 83.1
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 2.5e-154 548.9 314 82.5
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 3.3e-154 548.5 316 83.2
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 3.3e-154 548.5 312 84.0
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 4.3e-154 548.1 311 83.6
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 4.3e-154 548.1 311 83.6
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 4.3e-154 548.1 314 83.4
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 5.6e-154 547.7 312 83.3
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 9.5e-154 547.0 314 82.5
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 1.2e-153 546.6 314 83.4
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.6e-153 546.2 311 83.3
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 3.6e-153 545.0 311 83.0
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 4.7e-153 544.7 311 83.3
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 8.0e-153 543.9 313 84.0
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 1.0e-152 543.5 311 83.0
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 1.0e-152 543.5 314 83.8
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 1.4e-152 543.1 314 82.5
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 3.1e-152 542.0 314 82.2
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 5.2e-152 541.2 312 83.3
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 5.2e-152 541.2 312 82.7
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 5.2e-152 541.2 314 82.2
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 6.8e-152 540.8 314 82.8
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 6.8e-152 540.8 312 82.4
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 8.9e-152 540.4 316 82.6
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 1.5e-151 539.7 312 83.7
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 2.6e-151 538.9 312 81.7
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 3.4e-151 538.5 312 82.4
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 4.4e-151 538.1 312 82.1
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 5.8e-151 537.7 314 81.2
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 1.3e-150 536.6 316 80.7
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 2.2e-150 535.8 313 81.5
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 2.9e-150 535.4 315 81.6
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 8.3e-150 533.9 322 80.7
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 3.2e-149 531.9 311 81.4
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 4.1e-149 531.6 373 71.0
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 7.0e-149 530.8 314 81.2
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 1.2e-148 530.0 311 80.7
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 2.7e-148 528.9 340 77.1
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 6.0e-148 527.7 312 80.1
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 6.0e-148 527.7 349 73.9
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 2.3e-147 525.8 357 73.7
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 9.5e-146 520.4 312 79.8
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 1.2e-145 520.0 313 78.6
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 1.6e-145 519.6 313 78.9
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 2.1e-145 519.2 314 77.4
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 2.1e-145 519.2 294 84.7
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 2.8e-145 518.8 314 79.3
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 4.7e-145 518.1 313 78.6
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 3.1e-144 515.4 313 77.6
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 3.1e-144 515.4 313 78.3
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 4.0e-144 515.0 313 78.3
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 4.0e-144 515.0 313 78.3
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 4.0e-144 515.0 313 78.3
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 1.2e-143 513.5 314 78.0
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 1.2e-143 513.5 314 78.0
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 1.5e-143 513.1 313 78.0
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 2.0e-143 512.7 312 78.8
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 3.4e-143 511.9 314 77.7
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 3.4e-143 511.9 314 79.3
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 4.4e-143 511.5 311 78.5
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 1.7e-142 509.6 314 77.4
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 2.2e-142 509.2 311 77.5
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 4.9e-142 508.1 314 77.1
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 4.9e-142 508.1 379 68.6
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 2.7e-140 502.3 341 70.4
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 2.1e-137 492.7 321 72.6
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 2.8e-137 492.3 292 77.7
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 1.1e-136 490.3 314 75.2
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 1.2e-135 486.9 321 71.7
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 1.5e-135 486.5 346 70.5
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 4.0e-128 461.8 290 74.8
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 3.4e-127 458.8 314 71.7
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 9.9e-127 457.2 250 88.0
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 3.2e-125 452.2 257 85.6
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 2.7e-124 449.1 292 72.3
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 6.6e-123 444.5 244 87.7
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 8.1e-121 437.6 291 71.1
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 6.4e-118 427.9 292 68.5
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 5.4e-117 424.9 234 87.2
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 3.5e-116 422.2 261 78.9
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 2.4e-112 409.5 358 60.1
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 1.3e-110 403.7 238 80.7
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 2.3e-107 392.9 314 61.5
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 5.1e-99 365.2 321 62.0
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 8.2e-97 357.8 204 82.4
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 6.5e-78 295.0 166 83.1
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 1.6e-71 273.9 164 80.5
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 8.6e-46 188.3 310 39.4
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 1.4e-43 181.0 202 51.0
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.0e-38 164.9 107 73.8
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 1.7e-38 164.1 98 80.6
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 7.5e-34 148.7 117 66.7
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 2.2e-33 147.1 116 65.5
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.5e-29 134.4 81 75.3
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 3.4e-26 123.2 81 69.1
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 3.2e-24 116.7 57 87.7
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 2.1e-20 104.0 79 68.4
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 2.8e-20 103.6 107 53.3
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 2.3e-14 84.0 37 94.6
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 1.2e-12 78.2 162 36.4
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 2.6e-10 70.5 233 27.9


User provided reference genes

Program Settings