Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G0423 Erigeron canadensis HOM05D007991 ORTHO05D010158 3.8e-27 124.8 102 100.0
Lsat_1_v5_gn_7_112301 Lactuca sativa HOM05D007991 ORTHO05D010158 7.8e-20 100.5 62 85.5
HanXRQChr11g0334671 Helianthus annuus HOM05D007991 ORTHO05D010158 4.3e-18 94.7 62 79.0
Medtr2g069650 Medicago truncatula HOM05D007991 ORTHO05D010158 5.6e-18 94.4 60 80.0
Nn7g37867 Nelumbo nucifera HOM05D007991 ORTHO05D010158 1.2e-17 93.2 57 80.7
Atru.chr8.1056 Acer truncatum HOM05D007991 ORTHO05D010158 1.4e-16 89.7 54 85.2
TPR.G9765 Trifolium pratense HOM05D007991 ORTHO05D010158 1.8e-16 89.4 60 73.3
Cpa.g.sc10.36 Carica papaya HOM05D007991 ORTHO05D010158 2.3e-16 89.0 60 75.0
Aqoxy6G00820 Aquilegia oxysepala HOM05D007991 ORTHO05D010158 3.0e-16 88.6 61 72.1
Ah.07g206310 Amaranthus hybridus HOM05D007991 ORTHO05D010158 4.0e-16 88.2 59 71.2
AT3G12960 Arabidopsis thaliana HOM05D007991 ORTHO05D010158 5.2e-16 87.8 59 71.2
Manes.06G170901 Manihot esculenta HOM05D007991 ORTHO05D010158 8.9e-16 87.0 61 73.8
Prupe.4G140900 Prunus persica HOM05D007991 ORTHO05D010158 1.2e-15 86.7 56 75.0
GSVIVG01012568001 Vitis vinifera HOM05D007991 ORTHO05D010158 1.2e-15 86.7 57 75.4
GSVIVG01035227001 Vitis vinifera HOM05D007991 ORTHO05D010158 1.2e-15 86.7 57 75.4
Carub.0003s1230 Capsella rubella HOM05D007991 ORTHO05D010158 1.5e-15 86.3 59 71.2
Ciclev10023629m.g Citrus clementina HOM05D007991 ORTHO05D010158 1.5e-15 86.3 62 67.7
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 1.5e-15 86.3 55 78.2
Manes.06G170500 Manihot esculenta HOM05D007991 ORTHO05D010158 2.6e-15 85.5 61 72.1
Lalb_Chr19g0133391 Lupinus albus HOM05D007991 ORTHO05D010158 3.4e-15 85.1 61 65.6
TWI39G0184 Tripterygium wilfordii HOM05D007991 ORTHO05D010158 3.4e-15 85.1 62 67.7
Ca_03685_v3 Cicer arietinum L. HOM05D007991 ORTHO05D010158 4.4e-15 84.7 62 72.6
MELO3C010561.2 Cucumis melo HOM05D007991 ORTHO05D010158 4.4e-15 84.7 55 76.4
AL3G24640 Arabidopsis lyrata HOM05D007991 ORTHO05D010158 5.8e-15 84.3 55 74.5
EL10Ac4g08566 Beta vulgaris HOM05D007991 ORTHO05D010158 5.8e-15 84.3 59 69.5
SalBow2G0434 Salvia bowleyana HOM05D007991 ORTHO05D010158 7.5e-15 84.0 61 72.1
PGR042G3415 Punica granatum HOM05D007991 ORTHO05D010158 9.8e-15 83.6 56 73.2
Gohir.A11G002600 Gossypium hirsutum HOM05D007991 ORTHO05D010158 1.3e-14 83.2 57 71.9
Solyc07g066400.1 Solanum lycopersicum HOM05D007991 ORTHO05D010158 1.3e-14 83.2 59 71.2
CAN.G943.33 Capsicum annuum HOM05D007991 ORTHO05D010158 1.7e-14 82.8 59 69.5
Thhalv10022193m.g Eutrema salsugineum HOM05D007991 ORTHO05D010158 1.7e-14 82.8 59 69.5
MBI02_g12653_MAGBIO Magnolia biondii HOM05D007991 ORTHO05D010158 1.7e-14 82.8 56 73.2
Gorai.007G003200 Gossypium raimondii HOM05D007991 ORTHO05D010158 2.2e-14 82.4 57 71.9
Sc16g0005380 Simmondsia chinensis HOM05D007991 ORTHO05D010158 2.2e-14 82.4 53 73.6
PGSC0003DMG400022239 Solanum tuberosum HOM05D007991 ORTHO05D010158 2.2e-14 82.4 59 71.2
ClCG11G016360 Citrullus lanatus HOM05D007991 ORTHO05D010158 2.9e-14 82.0 55 74.5
ClCG11G016370 Citrullus lanatus HOM05D007991 ORTHO05D010158 2.9e-14 82.0 55 74.5
Peaxi162Scf00452g00812 Petunia axillaris HOM05D007991 ORTHO05D010158 2.9e-14 82.0 55 69.1
Psat1g011440 Pisum sativum HOM05D007991 ORTHO05D010158 3.7e-14 81.6 58 67.2
COL.COLO4_28875 Corchorus olitorius HOM05D007991 ORTHO05D010158 4.9e-14 81.3 62 62.9
BcaC09g48284 Brassica carinata HOM05D007991 ORTHO05D010158 6.4e-14 80.9 59 67.8
C01p52180 Brassica napus HOM05D007991 ORTHO05D010158 6.4e-14 80.9 59 67.8
BolC1t05158H Brassica oleracea HOM05D007991 ORTHO05D010158 6.4e-14 80.9 59 67.8
BraA01t04089Z Brassica rapa HOM05D007991 ORTHO05D010158 6.4e-14 80.9 59 67.8
CARHR087490 Cardamine hirsuta HOM05D007991 ORTHO05D010158 6.4e-14 80.9 61 68.9
PSO675G0275 Papaver somniferum HOM05D007991 ORTHO05D010158 6.4e-14 80.9 60 68.3
Sopen07g034570 Solanum pennellii HOM05D007991 ORTHO05D010158 6.4e-14 80.9 59 71.2
BcaB04g21024 Brassica carinata HOM05D007991 ORTHO05D010158 1.1e-13 80.1 59 66.1
unitig_8.g4768 Utricularia gibba HOM05D007991 ORTHO05D010158 1.1e-13 80.1 58 74.1
Gohir.D11G002200 Gossypium hirsutum HOM05D007991 ORTHO05D010158 1.8e-13 79.3 57 68.4
MD05G1219200 Malus domestica HOM05D007991 ORTHO05D010158 1.8e-13 79.3 56 67.9
CSS0001388 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 2.4e-13 79.0 58 69.0
Lj3g0014492 Lotus japonicus HOM05D007991 ORTHO05D010158 2.4e-13 79.0 60 63.3
Lalb_Chr03g0031611 Lupinus albus HOM05D007991 ORTHO05D010158 2.4e-13 79.0 53 69.8
Phvul.005G056100 Phaseolus vulgaris HOM05D007991 ORTHO05D010158 2.4e-13 79.0 57 64.9
RcHm_v2.0_Chr5g0026701 Rosa chinensis HOM05D007991 ORTHO05D010158 2.4e-13 79.0 61 63.9
QL04p074011 Quercus lobata HOM05D007991 ORTHO05D010158 3.2e-13 78.6 53 75.5
Glyma.08G172800 Glycine max HOM05D007991 ORTHO05D010158 4.1e-13 78.2 58 63.8
Sp3g11110 Schrenkiella parvula HOM05D007991 ORTHO05D010158 5.4e-13 77.8 59 66.1
CiPaw.04G012700 Carya illinoinensis HOM05D007991 ORTHO05D010158 9.2e-13 77.0 56 64.3
COL.COLO4_04148 Corchorus olitorius HOM05D007991 ORTHO05D010158 9.2e-13 77.0 54 68.5
CANSAT80G1088 Cannabis sativa HOM05D007991 ORTHO05D010158 1.2e-12 76.6 51 70.6
Cfa019429 Carpinus fangiana HOM05D007991 ORTHO05D010158 1.2e-12 76.6 50 74.0
Aa31LG8G190 Aethionema arabicum HOM05D007991 ORTHO05D010158 2.0e-12 75.9 59 61.0
FAN11G2864 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.0e-12 75.9 61 62.3
FAN21G1902 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.0e-12 75.9 61 62.3
FAN16G1552 Fragaria x ananassa HOM05D007991 ORTHO05D010158 6.0e-12 74.3 61 60.7
Nn4g23994 Nelumbo nucifera HOM05D007991 ORTHO05D010158 7.8e-12 73.9 56 69.6
Sed0025657 Sechium edule HOM05D007991 ORTHO05D010158 7.8e-12 73.9 57 68.4
Duzib205G1447 Durio zibethinus HOM05D007991 ORTHO05D010158 1.7e-11 72.8 59 61.0
FAN25G2658 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.3e-11 72.4 61 59.0
CSS0033446 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 6.6e-11 70.9 55 63.6
Nitab4.5_0008437g0010 Nicotiana tabacum HOM05D007991 ORTHO05D010158 4.3e-10 68.2 62 61.3
MD05G1300500 Malus domestica HOM05D007991 ORTHO05D010158 8.0e-09 63.9 48 68.8
Os08g0104400 Oryza sativa ssp. japonica HOM05D007991 ORTHO05D010158 1.1e-08 63.5 60 50.0
Zm00001eb260130 Zea mays HOM05D007991 ORTHO05D010158 1.2e-07 60.1 57 54.4


User provided reference genes

Program Settings