Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 1.1e-264 916.0 436 100.0
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 8.0e-223 776.9 436 83.7
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 8.0e-223 776.9 433 83.6
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 5.6e-192 674.5 429 73.7
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 2.1e-191 672.5 429 72.7
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 1.5e-189 666.4 429 72.5
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 2.4e-187 659.1 431 71.5
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 1.2e-186 656.8 426 72.3
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 1.6e-186 656.4 435 70.1
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 3.5e-186 655.2 434 69.8
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 7.8e-186 654.1 431 71.0
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.0e-185 653.7 426 70.9
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 1.3e-185 653.3 431 70.5
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 1.7e-185 652.9 434 70.3
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 2.3e-185 652.5 430 70.2
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 2.5e-184 649.0 430 70.5
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 4.3e-184 648.3 426 70.4
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 4.7e-183 644.8 426 70.0
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 6.2e-183 644.4 436 69.7
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 8.0e-183 644.0 430 69.8
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 8.0e-183 644.0 429 69.5
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.1e-182 643.7 430 70.0
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 1.8e-182 642.9 426 69.5
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.3e-182 642.5 426 69.7
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 5.2e-182 641.3 428 70.8
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 5.2e-182 641.3 428 70.8
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 5.2e-182 641.3 426 69.5
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 6.8e-182 641.0 433 70.0
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 6.8e-182 641.0 433 70.0
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 6.8e-182 641.0 429 69.2
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 8.9e-182 640.6 434 69.1
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 1.2e-181 640.2 432 67.8
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 2.0e-181 639.4 427 69.3
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 2.6e-181 639.0 428 69.9
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 2.6e-181 639.0 428 69.9
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 1.3e-180 636.7 430 70.0
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 1.3e-180 636.7 428 69.6
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 1.7e-180 636.3 431 68.9
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 2.2e-180 636.0 428 69.9
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 2.2e-180 636.0 434 68.9
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 2.2e-180 636.0 430 69.3
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 2.9e-180 635.6 432 69.0
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 4.9e-180 634.8 431 69.4
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 3.2e-179 632.1 434 68.7
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 3.2e-179 632.1 424 68.4
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 7.0e-179 630.9 427 69.1
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 9.2e-179 630.6 429 68.3
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 9.2e-179 630.6 434 67.1
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 9.2e-179 630.6 428 68.7
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 9.2e-179 630.6 431 67.5
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 2.7e-178 629.0 427 68.9
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 2.7e-178 629.0 430 68.4
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 6.0e-178 627.9 432 68.1
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 7.8e-178 627.5 434 66.8
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 7.8e-178 627.5 428 69.2
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 1.3e-177 626.7 426 69.2
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.1e-176 623.6 428 67.8
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 1.5e-176 623.2 430 66.7
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 2.1e-175 619.4 431 67.1
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 2.8e-175 619.0 430 67.7
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 8.1e-175 617.5 431 67.3
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 1.1e-174 617.1 428 66.6
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 1.1e-174 617.1 434 67.3
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 5.2e-174 614.8 424 67.9
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 5.2e-174 614.8 428 66.1
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 6.8e-174 614.4 431 66.8
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 1.2e-173 613.6 430 67.0
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 1.5e-173 613.2 427 66.0
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 2.0e-173 612.8 430 66.0
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 3.4e-173 612.1 365 74.2
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 7.5e-173 610.9 430 66.3
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 9.9e-173 610.5 427 66.0
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.3e-172 610.1 420 67.4
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 7.1e-171 604.4 430 66.3
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 1.2e-170 603.6 429 66.2
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.5e-170 602.1 431 67.1
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 3.5e-170 602.1 352 75.0
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 4.6e-170 601.7 339 78.5
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 4.6e-170 601.7 430 66.3
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 6.0e-170 601.3 431 65.9
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 2.3e-169 599.4 341 77.7
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 1.1e-168 597.0 355 74.6
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 1.9e-168 596.3 430 64.9
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 2.5e-168 595.9 425 64.9
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 3.3e-168 595.5 431 64.7
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 1.8e-166 589.7 427 63.0
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 2.4e-166 589.3 428 63.3
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 4.0e-166 588.6 359 73.0
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 5.2e-166 588.2 428 63.8
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 7.6e-165 584.3 429 63.6
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 9.9e-165 583.9 425 63.5
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 3.8e-164 582.0 434 65.0
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 4.9e-164 581.6 426 63.8
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 1.4e-163 580.1 425 63.5
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 1.4e-163 580.1 425 63.5
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 1.9e-163 579.7 427 63.0
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 4.2e-163 578.6 425 63.5
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 4.6e-162 575.1 425 62.6
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 4.6e-162 575.1 425 62.6
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 1.3e-161 573.5 428 63.6
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 2.3e-161 572.8 429 60.8
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 8.7e-161 570.9 349 72.2
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 1.3e-159 567.0 392 65.6
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 6.9e-158 561.2 356 70.2
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 9.0e-158 560.8 427 62.1
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 1.2e-157 560.5 356 69.9
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.1e-155 553.9 425 61.9
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 1.4e-155 553.5 358 68.4
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 2.4e-155 552.7 430 61.2
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 1.6e-154 550.1 409 64.3
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 3.3e-152 542.3 418 61.0
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 7.9e-146 521.2 431 59.4
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 6.7e-145 518.1 283 79.5
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 2.2e-140 503.1 283 76.7
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 2.9e-140 502.7 364 62.4
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 2.1e-135 486.5 413 56.7
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 1.0e-132 477.6 352 59.9
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 6.3e-127 458.4 357 60.5
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 1.9e-115 420.2 339 60.2
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 3.8e-100 369.4 215 74.4
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.1e-99 367.9 210 75.7
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 3.2e-99 366.3 209 75.6
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 5.7e-96 355.5 356 49.7
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 3.6e-90 336.3 311 51.8
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 5.6e-59 232.6 196 60.2
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 3.6e-50 203.4 338 39.3
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 2.0e-32 144.4 95 62.1
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 1.1e-22 112.1 80 57.5
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 1.2e-21 108.6 200 32.5
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 6.3e-18 96.3 125 44.0
Aa31LG8G11530 Aethionema arabicum HOM05D006015 ORTHO05D059074 4.2e-06 57.0 74 45.9


User provided reference genes

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