Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 2.1e-157 558.9 275 100.0
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 3.5e-107 392.1 287 74.2
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 2.3e-87 326.2 310 61.6
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 4.6e-83 312.0 300 57.7
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 9.5e-81 304.3 307 56.7
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 6.8e-79 298.1 306 56.5
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 1.5e-78 297.0 303 56.4
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 2.0e-78 296.6 292 57.5
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 4.4e-78 295.4 299 56.5
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 9.9e-78 294.3 287 56.1
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 9.9e-78 294.3 289 57.1
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 2.2e-77 293.1 282 56.7
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 3.7e-77 292.4 287 56.4
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 4.9e-77 292.0 282 57.8
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 6.4e-77 291.6 294 58.8
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 1.1e-76 290.8 292 56.5
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 3.2e-76 289.3 309 54.7
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 4.1e-76 288.9 301 54.8
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 9.2e-76 287.7 297 56.2
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 1.2e-75 287.3 301 53.8
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 4.6e-75 285.4 276 56.2
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 6.0e-75 285.0 298 53.4
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 7.8e-75 284.6 300 53.7
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 1.7e-74 283.5 278 59.7
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 2.3e-74 283.1 300 54.3
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 3.0e-74 282.7 286 55.9
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.0e-74 282.7 278 57.9
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 1.1e-73 280.8 308 52.6
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 1.5e-73 280.4 290 55.5
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 3.3e-73 279.3 286 54.2
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 3.3e-73 279.3 300 54.0
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 4.3e-73 278.9 233 64.8
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 5.6e-73 278.5 284 53.9
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 9.6e-73 277.7 308 51.9
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 9.6e-73 277.7 294 54.8
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.2e-72 277.3 278 58.3
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 2.8e-72 276.2 301 55.5
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 8.1e-72 274.6 300 55.7
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 8.1e-72 274.6 296 53.0
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 1.1e-71 274.2 300 55.7
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 1.4e-71 273.9 283 55.5
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 1.8e-71 273.5 291 55.0
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 2.4e-71 273.1 289 54.7
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 2.4e-71 273.1 295 55.6
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 3.1e-71 272.7 300 52.7
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 3.1e-71 272.7 282 53.5
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 6.8e-71 271.6 291 55.0
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 6.8e-71 271.6 284 54.9
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.0e-70 270.0 291 54.6
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 3.4e-70 269.2 271 56.8
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 3.4e-70 269.2 303 52.5
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 7.6e-70 268.1 283 55.1
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 1.3e-69 267.3 298 52.3
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 2.2e-69 266.5 289 54.3
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.9e-69 265.4 283 54.1
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.9e-69 265.4 283 54.1
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 4.9e-69 265.4 293 53.6
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 6.4e-69 265.0 271 55.0
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 3.2e-68 262.7 283 54.4
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 3.2e-68 262.7 311 49.5
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 7.1e-68 261.5 297 53.2
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 7.1e-68 261.5 288 54.2
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 1.2e-67 260.8 282 55.3
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 1.2e-67 260.8 280 54.3
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 3.5e-67 259.2 289 53.6
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 3.5e-67 259.2 296 52.4
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 4.6e-67 258.8 291 53.3
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 7.8e-67 258.1 293 51.9
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.0e-66 257.7 306 51.3
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.3e-66 257.3 282 54.3
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 1.7e-66 256.9 296 51.7
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 5.1e-66 255.4 287 51.6
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 1.1e-65 254.2 266 56.4
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 1.5e-65 253.8 330 49.1
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 4.3e-65 252.3 322 48.8
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 5.6e-65 251.9 270 54.1
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 8.1e-64 248.1 281 52.7
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 3.1e-63 246.1 337 46.3
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.2e-62 244.2 270 54.4
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 2.0e-62 243.4 332 46.7
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 2.0e-62 243.4 277 49.8
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 9.9e-62 241.1 297 50.2
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 8.4e-61 238.0 275 51.3
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 2.4e-60 236.5 349 43.8
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 3.2e-60 236.1 134 81.3
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 3.9e-58 229.2 269 50.2
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 3.6e-56 222.6 120 84.2
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 7.1e-52 208.4 269 45.4
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 2.7e-51 206.5 122 79.5
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.0e-50 204.5 109 82.6
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 4.3e-49 199.1 113 79.6
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 1.6e-48 197.2 252 44.8
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 3.8e-45 186.0 120 71.7
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 4.6e-43 179.1 98 81.6
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.3e-42 176.8 98 85.7
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 1.1e-41 174.5 260 42.7
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 1.9e-41 173.7 88 89.8
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 3.3e-41 172.9 291 39.9
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 7.4e-41 171.8 98 79.6
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 5.9e-38 162.2 233 47.2
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 2.9e-37 159.8 124 60.5
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 6.1e-35 152.1 98 72.4
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 5.1e-34 149.1 98 72.4
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 5.1e-34 149.1 82 80.5
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 2.0e-25 120.6 207 40.6
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 6.5e-21 105.5 219 37.0
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 3.6e-19 99.8 193 38.3
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 9.7e-17 91.7 198 40.4
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.3e-15 85.9 186 38.7
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 1.3e-13 81.3 42 88.1
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 2.9e-13 80.1 189 33.9
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 4.2e-12 76.3 52 67.3
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 4.2e-12 76.3 52 67.3
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 4.2e-12 76.3 52 67.3
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 4.2e-12 76.3 52 67.3
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 9.4e-12 75.1 41 78.0
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.1e-09 68.2 44 65.9
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.5e-09 67.8 179 33.0
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 7.5e-09 65.5 179 33.0
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 2.2e-08 63.9 184 33.2
Lsat_1_v5_gn_5_23780 Lactuca sativa HOM05D004869 ORTHO05D005893 2.2e-08 63.9 87 46.0


User provided reference genes

Program Settings