Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G0309 Erigeron canadensis HOM05D002385 ORTHO05D002245 1.6e-36 155.6 78 100.0
HanXRQChr11g0335361 Helianthus annuus HOM05D002385 ORTHO05D002245 5.4e-21 104.0 78 71.8
Eucgr.A00897 Eucalyptus grandis HOM05D002385 ORTHO05D002245 5.7e-15 84.0 76 60.5
ECA240G4719 Erigeron canadensis HOM05D002385 ORTHO05D002245 1.7e-14 82.4 78 62.8
Eucgr.A00898 Eucalyptus grandis HOM05D002385 ORTHO05D002245 2.9e-14 81.6 76 59.2
Oeu048060.1 Olea europaea HOM05D002385 ORTHO05D002245 3.7e-14 81.3 82 58.5
Eucgr.A00899 Eucalyptus grandis HOM05D002385 ORTHO05D002245 6.3e-14 80.5 79 62.0
Oeu003091.1 Olea europaea HOM05D002385 ORTHO05D002245 6.3e-14 80.5 82 58.5
Eucgr.A00896 Eucalyptus grandis HOM05D002385 ORTHO05D002245 8.3e-14 80.1 76 57.9
Oeu048064.1 Olea europaea HOM05D002385 ORTHO05D002245 2.4e-13 78.6 82 58.5
Thecc.01G172200 Theobroma cacao HOM05D002385 ORTHO05D002245 1.2e-12 76.3 78 59.0
Actinidia11006 Actinidia chinensis HOM05D002385 ORTHO05D002245 1.6e-12 75.9 84 56.0
Potri.016G019201 Populus trichocarpa HOM05D002385 ORTHO05D002245 1.6e-12 75.9 76 57.9
Cfa023568 Carpinus fangiana HOM05D002385 ORTHO05D002245 2.7e-12 75.1 69 60.9
Sabra16G0021200 Salix brachista HOM05D002385 ORTHO05D002245 3.5e-12 74.7 77 58.4
Sabra16G0025900 Salix brachista HOM05D002385 ORTHO05D002245 3.5e-12 74.7 77 58.4
CAN.G1202.1 Capsicum annuum HOM05D002385 ORTHO05D002245 4.6e-12 74.3 80 58.8
Dinv02957 Davidia involucrata HOM05D002385 ORTHO05D002245 4.6e-12 74.3 81 56.8
Glyma.08G171400 Glycine max HOM05D002385 ORTHO05D002245 4.6e-12 74.3 75 49.3
Atru.chr8.975 Acer truncatum HOM05D002385 ORTHO05D002245 1.0e-11 73.2 79 54.4
Atru.chr8.976 Acer truncatum HOM05D002385 ORTHO05D002245 1.0e-11 73.2 79 54.4
PGSC0003DMG400019578 Solanum tuberosum HOM05D002385 ORTHO05D002245 1.3e-11 72.8 79 54.4
Actinidia11007 Actinidia chinensis HOM05D002385 ORTHO05D002245 1.7e-11 72.4 75 58.7
Prupe.6G185200 Prunus persica HOM05D002385 ORTHO05D002245 1.7e-11 72.4 81 53.1
THA.LOC104826161 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 2.3e-11 72.0 80 56.2
Medtr2g069420 Medicago truncatula HOM05D002385 ORTHO05D002245 2.9e-11 71.6 79 57.0
Medtr2g069430 Medicago truncatula HOM05D002385 ORTHO05D002245 2.9e-11 71.6 81 58.0
Potri.006G021600 Populus trichocarpa HOM05D002385 ORTHO05D002245 2.9e-11 71.6 76 55.3
SGA_v2.0_scaffold181G39736 Striga asiatica HOM05D003210 ORTHO05D000001 2.9e-11 71.6 84 58.3
HanXRQChr03g0078081 Helianthus annuus HOM05D002385 ORTHO05D002245 3.9e-11 71.2 78 53.8
QL04p061416 Quercus lobata HOM05D002385 ORTHO05D002245 5.0e-11 70.9 67 58.2
TWI60G1403 Tripterygium wilfordii HOM05D002385 ORTHO05D002245 5.0e-11 70.9 79 54.4
Cfa023028 Carpinus fangiana HOM05D002385 ORTHO05D002245 6.6e-11 70.5 75 56.0
Medtr1g040735 Medicago truncatula HOM05D002385 ORTHO05D002245 6.6e-11 70.5 78 52.6
Psat1g011360 Pisum sativum HOM05D002385 ORTHO05D002245 6.6e-11 70.5 78 52.6
RcHm_v2.0_Chr2g0114521 Rosa chinensis HOM05D002385 ORTHO05D002245 6.6e-11 70.5 79 54.4
Duzib133G0918 Durio zibethinus HOM05D002385 ORTHO05D002245 8.6e-11 70.1 75 56.0
Lj3g0003491 Lotus japonicus HOM05D002385 ORTHO05D002245 8.6e-11 70.1 79 51.9
COL.COLO4_07164 Corchorus olitorius HOM05D002385 ORTHO05D002245 1.1e-10 69.7 77 57.1
Haze_13597 Corylus avellana HOM05D002385 ORTHO05D002245 1.1e-10 69.7 68 63.2
Glyma.08G170900 Glycine max HOM05D002385 ORTHO05D002245 1.1e-10 69.7 76 53.9
PGR031G2469 Punica granatum HOM05D002385 ORTHO05D002245 1.1e-10 69.7 78 56.4
Actinidia30458 Actinidia chinensis HOM05D002385 ORTHO05D002245 1.5e-10 69.3 80 55.0
RcHm_v2.0_Chr2g0153751 Rosa chinensis HOM05D002385 ORTHO05D002245 1.5e-10 69.3 68 61.8
Actinidia11099 Actinidia chinensis HOM05D002385 ORTHO05D002245 1.9e-10 68.9 70 52.9
Actinidia39326 Actinidia chinensis HOM05D002385 ORTHO05D002245 1.9e-10 68.9 81 58.0
Medtr1g040775 Medicago truncatula HOM05D002385 ORTHO05D002245 1.9e-10 68.9 78 50.0
Medtr5g042360 Medicago truncatula HOM05D002385 ORTHO05D002245 1.9e-10 68.9 78 50.0
Dinv18438 Davidia involucrata HOM05D002385 ORTHO05D002245 2.5e-10 68.6 91 52.7
FvH4_6g39680 Fragaria vesca HOM05D002385 ORTHO05D002245 2.5e-10 68.6 75 54.7
FAN05G4252 Fragaria x ananassa HOM05D002385 ORTHO05D002245 2.5e-10 68.6 75 54.7
FAN14G2541 Fragaria x ananassa HOM05D002385 ORTHO05D002245 2.5e-10 68.6 75 54.7
TPR.G9755 Trifolium pratense HOM05D002385 ORTHO05D002245 2.5e-10 68.6 82 51.2
BcaC02g07945 Brassica carinata HOM05D002385 ORTHO05D002245 3.3e-10 68.2 78 46.2
Haze_13594 Corylus avellana HOM05D002385 ORTHO05D002245 3.3e-10 68.2 64 59.4
Eucgr.A00900 Eucalyptus grandis HOM05D002385 ORTHO05D002245 3.3e-10 68.2 75 52.0
FvH4_6g39660 Fragaria vesca HOM05D002385 ORTHO05D002245 3.3e-10 68.2 75 54.7
Prupe.6G185500 Prunus persica HOM05D002385 ORTHO05D002245 3.3e-10 68.2 74 58.1
QL04p061407 Quercus lobata HOM05D002385 ORTHO05D002245 3.3e-10 68.2 73 53.4
Psat6g029000 Pisum sativum HOM05D002385 ORTHO05D002245 4.3e-10 67.8 77 50.6
Prupe.6G185400 Prunus persica HOM05D002385 ORTHO05D002245 4.3e-10 67.8 60 60.0
BcaB06g28585 Brassica carinata HOM05D002385 ORTHO05D002245 5.6e-10 67.4 78 46.2
CSS0047514 Camellia sinensis var. sinensis HOM05D002385 ORTHO05D002245 5.6e-10 67.4 81 55.6
Cpa.g.sc7.104 Carica papaya HOM05D002385 ORTHO05D002245 5.6e-10 67.4 62 51.6
FAN02G0915 Fragaria x ananassa HOM05D002385 ORTHO05D002245 5.6e-10 67.4 75 53.3
FAN14G3003 Fragaria x ananassa HOM05D002385 ORTHO05D002245 5.6e-10 67.4 75 54.7
Glyma.08G172300 Glycine max HOM05D002385 ORTHO05D002245 5.6e-10 67.4 83 53.0
Oeu056976.2 Olea europaea HOM05D002385 ORTHO05D002245 5.6e-10 67.4 72 52.8
RcHm_v2.0_Chr2g0153691 Rosa chinensis HOM05D002385 ORTHO05D002245 5.6e-10 67.4 75 54.7
GSVIVG01015781001 Vitis vinifera HOM05D002385 ORTHO05D002245 5.6e-10 67.4 82 56.1
GSVIVG01015789001 Vitis vinifera HOM05D002385 ORTHO05D002245 5.6e-10 67.4 82 56.1
CANSAT64G2629 Cannabis sativa HOM05D002385 ORTHO05D002245 7.3e-10 67.0 69 49.3
MD09G1137600 Malus domestica HOM05D002385 ORTHO05D002245 7.3e-10 67.0 61 60.7
Peaxi162Scf00322g00010 Petunia axillaris HOM05D002385 ORTHO05D002245 7.3e-10 67.0 84 54.8
QL04p061381 Quercus lobata HOM05D002385 ORTHO05D002245 7.3e-10 67.0 73 53.4
THA.LOC109116124 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 7.3e-10 67.0 78 44.9
CSS0045060 Camellia sinensis var. sinensis HOM05D002385 ORTHO05D002245 9.5e-10 66.6 82 54.9
Manes.09G073500 Manihot esculenta HOM05D002385 ORTHO05D002245 9.5e-10 66.6 74 54.1
Oeu012375.1 Olea europaea HOM05D002385 ORTHO05D002245 9.5e-10 66.6 80 50.0
Sopen05g012340 Solanum pennellii HOM05D002385 ORTHO05D002245 9.5e-10 66.6 63 57.1
Migut.M01554 Erythranthe guttata HOM05D002385 ORTHO05D002245 1.2e-09 66.2 69 53.6
MD17G1127900 Malus domestica HOM05D002385 ORTHO05D002245 1.2e-09 66.2 78 52.6
vmacro09249 Vaccinium macrocarpon HOM05D002385 ORTHO05D002245 1.2e-09 66.2 82 54.9
arahy.Tifrunner.gnm1.ann1.7QB2HQ Arachis hypogaea HOM05D002385 ORTHO05D002245 1.6e-09 65.9 86 52.3
C04p61680 Brassica napus HOM05D002385 ORTHO05D002245 1.6e-09 65.9 78 44.9
Glyma.15G256000 Glycine max HOM05D002385 ORTHO05D002245 1.6e-09 65.9 76 47.4
Medtr4g091090 Medicago truncatula HOM05D002385 ORTHO05D002245 1.6e-09 65.9 80 51.2
unitig_699.g19631 Utricularia gibba HOM05D002385 ORTHO05D002245 1.6e-09 65.9 85 51.8
CiPaw.03G113600 Carya illinoinensis HOM05D002385 ORTHO05D002245 2.1e-09 65.5 72 56.9
Nitab4.5_0003177g0010 Nicotiana tabacum HOM05D002385 ORTHO05D002245 2.1e-09 65.5 81 53.1
Prupe.3G187300 Prunus persica HOM05D002385 ORTHO05D002245 2.1e-09 65.5 78 53.8
Rhsim06G0138200 Rhododendron simsii HOM05D002385 ORTHO05D002245 2.1e-09 65.5 84 52.4
AT3G22240 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 2.8e-09 65.1 78 51.3
BraA04t17993Z Brassica rapa HOM05D002385 ORTHO05D002245 2.8e-09 65.1 78 44.9
Haze_13593 Corylus avellana HOM05D002385 ORTHO05D002245 2.8e-09 65.1 74 58.1
Migut.M00099 Erythranthe guttata HOM05D002385 ORTHO05D002245 3.6e-09 64.7 78 56.4
Thhalv10021881m.g Eutrema salsugineum HOM05D002385 ORTHO05D002245 3.6e-09 64.7 78 52.6
RcHm_v2.0_Chr2g0153711 Rosa chinensis HOM05D002385 ORTHO05D002245 3.6e-09 64.7 68 57.4
AL3G36500 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 4.7e-09 64.3 78 51.3
Cfa023569 Carpinus fangiana HOM05D002385 ORTHO05D002245 4.7e-09 64.3 65 61.5
Solyc05g016060.4 Solanum lycopersicum HOM05D002385 ORTHO05D002245 4.7e-09 64.3 63 55.6
BcaB02g10483 Brassica carinata HOM05D002385 ORTHO05D002245 6.2e-09 63.9 78 44.9
A05p12990 Brassica napus HOM05D002385 ORTHO05D002245 6.2e-09 63.9 78 44.9
BraA05t20239Z Brassica rapa HOM05D002385 ORTHO05D002245 6.2e-09 63.9 78 44.9
FAN26G3044 Fragaria x ananassa HOM05D002385 ORTHO05D002245 6.2e-09 63.9 60 60.0
QL04p061357 Quercus lobata HOM05D002385 ORTHO05D002245 6.2e-09 63.9 73 52.1
RcHm_v2.0_Chr2g0153701 Rosa chinensis HOM05D002385 ORTHO05D002245 6.2e-09 63.9 77 54.5
RcHm_v2.0_Chr2g0153741 Rosa chinensis HOM05D002385 ORTHO05D002245 6.2e-09 63.9 75 52.0
AL4G27550 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 8.0e-09 63.5 78 44.9
Medtr2g069400 Medicago truncatula HOM05D002385 ORTHO05D002245 8.0e-09 63.5 80 46.2
Sp4g14570 Schrenkiella parvula HOM05D002385 ORTHO05D002245 8.0e-09 63.5 78 44.9
THA.LOC104822278 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 8.0e-09 63.5 74 43.2
TPR.G9750 Trifolium pratense HOM05D002385 ORTHO05D002245 8.0e-09 63.5 80 47.5
TAR626G0681 Trochodendron aralioides HOM05D002385 ORTHO05D002245 8.0e-09 63.5 87 49.4
Atru.chr11.2673 Acer truncatum HOM05D002385 ORTHO05D002245 1.0e-08 63.2 66 47.0
Carub.0003s2241 Capsella rubella HOM05D002385 ORTHO05D002245 1.0e-08 63.2 78 50.0
Cfa023571 Carpinus fangiana HOM05D002385 ORTHO05D002245 1.0e-08 63.2 65 61.5
Haze_13596 Corylus avellana HOM05D002385 ORTHO05D002245 1.0e-08 63.2 65 61.5
Haze_13600 Corylus avellana HOM05D002385 ORTHO05D002245 1.0e-08 63.2 65 61.5
Glyma.08G170700 Glycine max HOM05D002385 ORTHO05D002245 1.0e-08 63.2 78 47.4
Glyma.08G170800 Glycine max HOM05D002385 ORTHO05D002245 1.0e-08 63.2 78 48.7
FvH4_1g21001 Fragaria vesca HOM05D002385 ORTHO05D002245 1.4e-08 62.8 78 52.6
FAN14G0168 Fragaria x ananassa HOM05D002385 ORTHO05D002245 1.4e-08 62.8 77 42.9
Psat1g003480 Pisum sativum HOM05D002385 ORTHO05D002245 1.4e-08 62.8 80 48.8
FAN23G3060 Fragaria x ananassa HOM05D002385 ORTHO05D002245 1.8e-08 62.4 54 63.0
Glyma.15G256300 Glycine max HOM05D002385 ORTHO05D002245 1.8e-08 62.4 78 46.2
Sp4g14580 Schrenkiella parvula HOM05D002385 ORTHO05D002245 1.8e-08 62.4 78 44.9
BcaC02g11342 Brassica carinata HOM05D002385 ORTHO05D002245 2.3e-08 62.0 78 43.6
C04p17420 Brassica napus HOM05D002385 ORTHO05D002245 2.3e-08 62.0 78 43.6
Ca_03672_v3 Cicer arietinum L. HOM05D002385 ORTHO05D002245 2.3e-08 62.0 80 47.5
Psat1g003560 Pisum sativum HOM05D002385 ORTHO05D002245 2.3e-08 62.0 81 46.9
MELO3C026402.2 Cucumis melo HOM05D002385 ORTHO05D002245 3.1e-08 61.6 65 56.9
RcHm_v2.0_Chr2g0114501 Rosa chinensis HOM05D002385 ORTHO05D002245 3.1e-08 61.6 67 56.7
GSVIVG01015788001 Vitis vinifera HOM05D002385 ORTHO05D002245 3.1e-08 61.6 83 55.4
FvH4_6g39683 Fragaria vesca HOM05D002385 ORTHO05D002245 4.0e-08 61.2 51 52.9
Nn7g38131 Nelumbo nucifera HOM05D002385 ORTHO05D002245 4.0e-08 61.2 89 49.4
Dinv19617 Davidia involucrata HOM05D002385 ORTHO05D002245 5.2e-08 60.8 96 39.6
Phvul.005G057500 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 5.2e-08 60.8 75 48.0
AT2G32210 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 6.8e-08 60.5 78 43.6
Lj6g0002718 Lotus japonicus HOM05D002385 ORTHO05D002245 6.8e-08 60.5 67 53.7
Rhsim06G0138300 Rhododendron simsii HOM05D002385 ORTHO05D002245 6.8e-08 60.5 84 51.2
GSVIVG01015780001 Vitis vinifera HOM05D002385 ORTHO05D002245 6.8e-08 60.5 83 53.0
Sabra06G0015400 Salix brachista HOM05D002385 ORTHO05D002245 8.9e-08 60.1 74 51.4
Carub.0004s1351 Capsella rubella HOM05D002385 ORTHO05D002245 1.2e-07 59.7 80 47.5
BcaC09g49159 Brassica carinata HOM05D002385 ORTHO05D002245 1.5e-07 59.3 78 48.7
CARHR098150 Cardamine hirsuta HOM05D002385 ORTHO05D002245 1.5e-07 59.3 78 47.4
Sed0001434 Sechium edule HOM05D002385 ORTHO05D002245 1.5e-07 59.3 68 57.4
arahy.Tifrunner.gnm1.ann1.3UW96L Arachis hypogaea HOM05D002385 ORTHO05D002245 2.0e-07 58.9 78 47.4
ClCG09G022550 Citrullus lanatus HOM05D002385 ORTHO05D002245 2.0e-07 58.9 91 42.9
ClCG11G016780 Citrullus lanatus HOM05D002385 ORTHO05D002245 2.0e-07 58.9 66 54.5
Gorai.001G092800 Gossypium raimondii HOM05D002385 ORTHO05D002245 2.6e-07 58.5 78 52.6
Phvul.005G057200 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 2.6e-07 58.5 66 48.5
Prupe.6G185600 Prunus persica HOM05D002385 ORTHO05D002245 2.6e-07 58.5 57 57.9
TPR.G9734 Trifolium pratense HOM05D002385 ORTHO05D002245 2.6e-07 58.5 76 50.0
TWI34G0572 Tripterygium wilfordii HOM05D002385 ORTHO05D002245 2.6e-07 58.5 80 53.8
Gohir.D07G086800 Gossypium hirsutum HOM05D002385 ORTHO05D002245 3.4e-07 58.2 78 52.6
QL04p073225 Quercus lobata HOM05D002385 ORTHO05D002245 3.4e-07 58.2 71 43.7
GSVIVG01015779001 Vitis vinifera HOM05D002385 ORTHO05D002245 3.4e-07 58.2 81 43.2
DCAR_016934 Daucus carota HOM05D002385 ORTHO05D002245 4.4e-07 57.8 54 64.8
Lj3g0007335 Lotus japonicus HOM05D002385 ORTHO05D002245 4.4e-07 57.8 79 48.1
CARHR125980 Cardamine hirsuta HOM05D002385 ORTHO05D002245 5.8e-07 57.4 80 42.5
FAN02G1107 Fragaria x ananassa HOM05D002385 ORTHO05D002245 5.8e-07 57.4 65 44.6
Glyma.15G256200 Glycine max HOM05D002385 ORTHO05D002245 5.8e-07 57.4 75 42.7
Gohir.D07G190900 Gossypium hirsutum HOM05D002385 ORTHO05D002245 5.8e-07 57.4 80 46.2
Gorai.001G213300 Gossypium raimondii HOM05D002385 ORTHO05D002245 5.8e-07 57.4 80 46.2
Aqoxy1G01477 Aquilegia oxysepala HOM05D002385 ORTHO05D002245 7.5e-07 57.0 72 54.2
C01p42010 Brassica napus HOM05D002385 ORTHO05D002245 7.5e-07 57.0 53 60.4
CsaV3_4G032300 Cucumis sativus L. HOM05D002385 ORTHO05D002245 7.5e-07 57.0 65 52.3
Duzib133G1087 Durio zibethinus HOM05D002385 ORTHO05D002245 9.8e-07 56.6 83 49.4
Prupe.3G187200 Prunus persica HOM05D002385 ORTHO05D002245 9.8e-07 56.6 72 51.4
DCAR_013336 Daucus carota HOM05D002385 ORTHO05D002245 1.3e-06 56.2 63 55.6
Gohir.A07G081200 Gossypium hirsutum HOM05D002385 ORTHO05D002245 1.3e-06 56.2 57 61.4
Actinidia11100 Actinidia chinensis HOM05D003155 ORTHO05D002245 1.7e-06 55.8 67 56.7
Ca_03673_v3 Cicer arietinum L. HOM05D002385 ORTHO05D002245 1.7e-06 55.8 74 47.3
FvH4_6g39640 Fragaria vesca HOM05D002385 ORTHO05D002245 1.7e-06 55.8 66 43.9
FAN14G3978 Fragaria x ananassa HOM05D002385 ORTHO05D002245 1.7e-06 55.8 66 43.9
Sed0017850 Sechium edule HOM05D002385 ORTHO05D002245 1.7e-06 55.8 75 44.0
Aa31LG5G4320 Aethionema arabicum HOM05D002385 ORTHO05D002245 2.2e-06 55.5 83 42.2
Cc05_g00090 Coffea canephora HOM05D002385 ORTHO05D002245 2.2e-06 55.5 83 50.6
Duzib138G1429 Durio zibethinus HOM05D002385 ORTHO05D002245 2.9e-06 55.1 74 47.3
Glyma.13G003300 Glycine max HOM05D002385 ORTHO05D002245 2.9e-06 55.1 67 53.7
Lsat_1_v5_gn_1_82281 Lactuca sativa HOM05D019240 ORTHO05D002245 2.9e-06 55.1 82 42.7
Lsat_1_v5_gn_7_112120 Lactuca sativa HOM05D002385 ORTHO05D002245 2.9e-06 55.1 28 89.3
Phvul.006G001200 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 2.9e-06 55.1 51 62.7
Sp3g20030 Schrenkiella parvula HOM05D002385 ORTHO05D002245 2.9e-06 55.1 78 48.7
FvH4_6g39682 Fragaria vesca HOM05D002385 ORTHO05D002245 8.3e-06 53.5 65 41.5
FAN05G0132 Fragaria x ananassa HOM05D002385 ORTHO05D002245 8.3e-06 53.5 65 41.5
Lalb_Chr25g0284941 Lupinus albus HOM05D002385 ORTHO05D002245 8.3e-06 53.5 80 43.8


User provided reference genes

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