Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G0103 Erigeron canadensis HOM05D003210 ORTHO05D000001 3.0e-129 466.5 242 100.0
HanXRQChr04g0122161 Helianthus annuus HOM05D003210 ORTHO05D000001 4.2e-14 84.0 43 83.7
HanXRQChr06g0169331 Helianthus annuus HOM05D003210 ORTHO05D000001 7.2e-14 83.2 44 81.8
arahy.Tifrunner.gnm1.ann1.6HP7HZ Arachis hypogaea HOM05D002890 ORTHO05D009847 2.8e-10 71.2 112 35.7
Oeu017112.4 Olea europaea HOM05D000167 ORTHO05D000465 2.8e-10 71.2 101 35.6
Lj3C22T6 Lonicera japonica HOM05D003210 ORTHO05D000001 8.2e-10 69.7 41 75.6
MD08G1245900 Malus domestica HOM05D003210 ORTHO05D000001 8.2e-10 69.7 129 33.3
Dinv44640 Davidia involucrata HOM05D010002 ORTHO05D016273 1.4e-09 68.9 105 35.2
CAN.G674.2 Capsicum annuum HOM05D003210 ORTHO05D000001 1.8e-09 68.6 59 49.2
ClCG08G009320 Citrullus lanatus HOM05D003210 ORTHO05D000001 1.8e-09 68.6 41 80.5
arahy.Tifrunner.gnm1.ann1.J4YFBX Arachis hypogaea HOM05D002890 ORTHO05D009847 4.1e-09 67.4 112 33.9
CiPaw.08G142200 Carya illinoinensis HOM05D003210 ORTHO05D000001 4.1e-09 67.4 41 75.6
Dinv34734 Davidia involucrata HOM05D003210 ORTHO05D000001 4.1e-09 67.4 51 51.0
MELO3C026530.2 Cucumis melo HOM05D003210 ORTHO05D000001 5.3e-09 67.0 41 78.0
CsaV3_6G031450 Cucumis sativus L. HOM05D003210 ORTHO05D000001 5.3e-09 67.0 41 78.0
TAR381G0732 Trochodendron aralioides HOM05D003210 ORTHO05D000001 5.3e-09 67.0 51 51.0
CSS0000965 Camellia sinensis var. sinensis HOM05D003210 ORTHO05D000001 7.0e-09 66.6 52 51.9
Haze_03893 Corylus avellana HOM05D003210 ORTHO05D000001 7.0e-09 66.6 41 80.5
Nitab4.5_0000574g0030 Nicotiana tabacum HOM05D003210 ORTHO05D000001 9.1e-09 66.2 48 58.3
Nitab4.5_0002364g0030 Nicotiana tabacum HOM05D003210 ORTHO05D000001 9.1e-09 66.2 48 58.3
TWI53G0425 Tripterygium wilfordii HOM05D003210 ORTHO05D000001 9.1e-09 66.2 41 73.2
MBI16_g31256_MAGBIO Magnolia biondii HOM05D003210 ORTHO05D000001 1.2e-08 65.9 46 54.3
Peaxi162Scf00370g00062 Petunia axillaris HOM05D003210 ORTHO05D000001 1.2e-08 65.9 49 55.1
MD15G1441200 Malus domestica HOM05D003210 ORTHO05D000001 1.6e-08 65.5 64 43.8
Nitab4.5_0002165g0010 Nicotiana tabacum HOM05D003210 ORTHO05D000001 2.0e-08 65.1 49 55.1
QL12p037893 Quercus lobata HOM05D003210 ORTHO05D000001 2.0e-08 65.1 41 78.0
Actinidia23531 Actinidia chinensis HOM05D000424 ORTHO05D038032 2.6e-08 64.7 141 32.6
Phvul.008G101600 Phaseolus vulgaris HOM05D003210 ORTHO05D000001 2.6e-08 64.7 40 67.5
Sed0026111 Sechium edule HOM05D003210 ORTHO05D000001 2.6e-08 64.7 40 75.0
TWI74G0121 Tripterygium wilfordii HOM05D003210 ORTHO05D000001 2.6e-08 64.7 41 73.2
Zm00001eb315460 Zea mays HOM05D003689 ORTHO05D003950 2.6e-08 64.7 149 30.9
CANSAT01G1059 Cannabis sativa HOM05D003210 ORTHO05D000001 3.5e-08 64.3 41 73.2
Migut.H02282 Erythranthe guttata HOM05D003210 ORTHO05D000001 3.5e-08 64.3 49 53.1
Lsat_1_v5_gn_7_6901 Lactuca sativa HOM05D003210 ORTHO05D000001 3.5e-08 64.3 44 63.6
VMungo1383G3073 Vigna mungo HOM05D003210 ORTHO05D000001 3.5e-08 64.3 40 67.5
FAN23G1801 Fragaria x ananassa HOM05D003210 ORTHO05D000001 4.5e-08 63.9 120 30.8
QL01p002440 Quercus lobata HOM05D006556 ORTHO05D008146 4.5e-08 63.9 134 30.6
RcHm_v2.0_Chr1g0329241 Rosa chinensis HOM05D003210 ORTHO05D000001 4.5e-08 63.9 49 53.1
FAN03G0748 Fragaria x ananassa HOM05D003210 ORTHO05D000001 5.9e-08 63.5 61 49.2
SMO339G0004 Selaginella moellendorffii HOM05D003689 ORTHO05D008530 5.9e-08 63.5 119 33.6
PGSC0003DMG401028232 Solanum tuberosum HOM05D003210 ORTHO05D000001 5.9e-08 63.5 46 54.3
AUR62000377 Chenopodium quinoa HOM05D000162 ORTHO05D000090 7.7e-08 63.2 144 25.7
FvH4_7g04271 Fragaria vesca HOM05D003210 ORTHO05D000001 1.3e-07 62.4 57 49.1
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 1.3e-07 62.4 120 33.3
Medtr8g463610 Medicago truncatula HOM05D006503 ORTHO05D008116 1.3e-07 62.4 131 31.3
Cpa.g.sc64.144 Carica papaya HOM05D000424 ORTHO05D000355 1.7e-07 62.0 103 35.0
Cc03_g12590 Coffea canephora HOM05D003210 ORTHO05D000001 1.7e-07 62.0 53 49.1
Migut.B00504 Erythranthe guttata HOM05D005362 ORTHO05D006895 1.7e-07 62.0 128 28.9
Lalb_Chr03g0042211 Lupinus albus HOM05D003210 ORTHO05D000001 1.7e-07 62.0 41 65.9
PSO017G1665 Papaver somniferum HOM05D015807 ORTHO05D011376 1.7e-07 62.0 128 28.9
AUR62039467 Chenopodium quinoa HOM05D003210 ORTHO05D000001 2.2e-07 61.6 75 34.7
FAN08G2598 Fragaria x ananassa HOM05D000424 ORTHO05D000355 2.2e-07 61.6 141 31.9
Lalb_Chr19g0125341 Lupinus albus HOM05D003210 ORTHO05D000001 2.2e-07 61.6 41 65.9
Manes.12G124600 Manihot esculenta HOM05D003210 ORTHO05D000001 2.2e-07 61.6 40 72.5
vmacro16405 Vaccinium macrocarpon HOM05D000131 ORTHO05D000086 2.2e-07 61.6 113 32.7
Cfa002200 Carpinus fangiana HOM05D005973 ORTHO05D007285 2.9e-07 61.2 139 27.3
Ciclev10018770m.g Citrus clementina HOM05D003210 ORTHO05D000001 2.9e-07 61.2 40 67.5
FAN20G1808 Fragaria x ananassa HOM05D003210 ORTHO05D000001 2.9e-07 61.2 129 31.8
THA.LOC104798889 Tarenaya hassleriana HOM05D003210 ORTHO05D000001 2.9e-07 61.2 122 27.9
vmacro18279 Vaccinium macrocarpon HOM05D003210 ORTHO05D008377 2.9e-07 61.2 44 54.5
Aqoxy3G03650 Aquilegia oxysepala HOM05D005362 ORTHO05D006895 3.8e-07 60.8 138 29.7
Cc11_g12130 Coffea canephora HOM05D005622 ORTHO05D002854 3.8e-07 60.8 131 32.1
Solyc10g081880.3 Solanum lycopersicum HOM05D003210 ORTHO05D000001 3.8e-07 60.8 46 52.2
Sopen10g032390 Solanum pennellii HOM05D003210 ORTHO05D000001 3.8e-07 60.8 46 52.2
Thecc.01G088700 Theobroma cacao HOM05D003210 ORTHO05D000001 3.8e-07 60.8 40 70.0
A09p62690 Brassica napus HOM05D000162 ORTHO05D000090 5.0e-07 60.5 121 28.1
Manes.06G082600 Manihot esculenta HOM05D005362 ORTHO05D006895 5.0e-07 60.5 128 28.9
Rhsim05G0168300 Rhododendron simsii HOM05D003210 ORTHO05D000001 6.5e-07 60.1 49 49.0
SalBow2G1681 Salvia bowleyana HOM05D000891 ORTHO05D000761 6.5e-07 60.1 119 31.9
SGA_v2.0_scaffold181G39736 Striga asiatica HOM05D003210 ORTHO05D000001 6.5e-07 60.1 42 59.5
TAR625G1193 Trochodendron aralioides HOM05D003210 ORTHO05D000001 6.5e-07 60.1 40 67.5
AUR62027713 Chenopodium quinoa HOM05D003210 ORTHO05D000001 8.5e-07 59.7 82 32.9
Lj5P134T43 Lonicera japonica HOM05D005362 ORTHO05D006895 8.5e-07 59.7 128 26.6
Sabra06G0098600 Salix brachista HOM05D003210 ORTHO05D000001 8.5e-07 59.7 41 68.3
THA.LOC104802656 Tarenaya hassleriana HOM05D008810 ORTHO05D010971 8.5e-07 59.7 113 31.9
CDE12G0148 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 1.1e-06 59.3 121 31.4
Cc11_g04710 Coffea canephora HOM05D005362 ORTHO05D006895 1.1e-06 59.3 125 28.0
Eucgr.H02438 Eucalyptus grandis HOM05D003210 ORTHO05D000001 1.1e-06 59.3 56 39.3
Manes.05G118900 Manihot esculenta HOM05D005973 ORTHO05D007285 1.1e-06 59.3 171 24.6
Potri.006G124900 Populus trichocarpa HOM05D003210 ORTHO05D000001 1.1e-06 59.3 41 68.3
SalBow2G3131 Salvia bowleyana HOM05D000891 ORTHO05D000761 1.1e-06 59.3 119 31.1
SEGI_05946 Sequoiadendron giganteum HOM05D003900 ORTHO05D050885 1.1e-06 59.3 110 31.8
TAR371G1139 Trochodendron aralioides HOM05D005362 ORTHO05D006895 1.1e-06 59.3 138 29.0
Aqoxy6G00832 Aquilegia oxysepala HOM05D003210 ORTHO05D000001 1.5e-06 58.9 40 62.5
Migut.G01107 Erythranthe guttata HOM05D007212 ORTHO05D009094 1.5e-06 58.9 111 32.4
Oeu040066.1 Olea europaea HOM05D003210 ORTHO05D000001 1.5e-06 58.9 44 56.8
EL10Ac6g15188 Beta vulgaris HOM05D003210 ORTHO05D000001 2.5e-06 58.2 40 60.0
C08p15620 Brassica napus HOM05D000032 ORTHO05D007907 2.5e-06 58.2 116 25.0
BolC8t49189H Brassica oleracea HOM05D000032 ORTHO05D007907 2.5e-06 58.2 116 25.0
Prupe.1G583300 Prunus persica HOM05D003210 ORTHO05D000001 2.5e-06 58.2 42 61.9
SalBow3G1735 Salvia bowleyana HOM05D003210 ORTHO05D000001 2.5e-06 58.2 43 53.5
SMO169G0290 Selaginella moellendorffii HOM05D025117 ORTHO05D026130 2.5e-06 58.2 121 30.6
FvH4_2g11090 Fragaria vesca HOM05D003210 ORTHO05D000001 3.2e-06 57.8 39 61.5
FAN06G2970 Fragaria x ananassa HOM05D005973 ORTHO05D007285 3.2e-06 57.8 172 25.0
FAN26G1074 Fragaria x ananassa HOM05D003210 ORTHO05D000001 3.2e-06 57.8 71 38.0
Hma1.2p1_1765F.1_g301480 Hydrangea macrophylla HOM05D000424 ORTHO05D000355 3.2e-06 57.8 141 29.8
Phvul.010G102600 Phaseolus vulgaris HOM05D002986 ORTHO05D007611 3.2e-06 57.8 107 29.9
Psat5g195760 Pisum sativum HOM05D006888 ORTHO05D008371 3.2e-06 57.8 127 29.9
PGSC0003DMG400023572 Solanum tuberosum HOM05D003210 ORTHO05D000001 3.2e-06 57.8 46 54.3
Ca_16602_v3 Cicer arietinum L. HOM05D000424 ORTHO05D000355 4.2e-06 57.4 140 28.6
ECA240G1124 Erigeron canadensis HOM05D005398 ORTHO05D000476 4.2e-06 57.4 111 32.4
Glyma.07G100300 Glycine max HOM05D000162 ORTHO05D000090 4.2e-06 57.4 107 29.9
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 4.2e-06 57.4 125 30.4
PGSC0003DMG400037705 Solanum tuberosum HOM05D005622 ORTHO05D002854 4.2e-06 57.4 131 34.4
Atru.chr4.1465 Acer truncatum HOM05D003210 ORTHO05D000001 5.5e-06 57.0 46 47.8
Actinidia08438 Actinidia chinensis HOM05D000162 ORTHO05D000090 5.5e-06 57.0 118 32.2
AL6G37510 Arabidopsis lyrata HOM05D003689 ORTHO05D003950 5.5e-06 57.0 110 29.1
AT5G25630 Arabidopsis thaliana HOM05D003689 ORTHO05D003950 5.5e-06 57.0 110 29.1
Duzib264G1117 Durio zibethinus HOM05D003210 ORTHO05D000001 5.5e-06 57.0 42 50.0
Lsat_1_v5_gn_1_11600 Lactuca sativa HOM05D000162 ORTHO05D000090 5.5e-06 57.0 138 26.1
MBI06_g05054_MAGBIO Magnolia biondii HOM05D005362 ORTHO05D006895 5.5e-06 57.0 135 26.7
SGA_v2.0_scaffold8G04573 Striga asiatica HOM05D000424 ORTHO05D002854 5.5e-06 57.0 107 29.0
VMungo1309G1456 Vigna mungo HOM05D006503 ORTHO05D008116 5.5e-06 57.0 111 31.5
Migut.G00851 Erythranthe guttata HOM05D000162 ORTHO05D000090 7.2e-06 56.6 104 32.7
HPP92_021332 Vanilla planifolia HOM05D007212 ORTHO05D000003 7.2e-06 56.6 110 32.7
COL.COLO4_27373 Corchorus olitorius HOM05D003210 ORTHO05D000001 9.4e-06 56.2 160 24.4
Lj6g0015281 Lotus japonicus HOM05D002986 ORTHO05D007611 9.4e-06 56.2 103 29.1
vmacro11106 Vaccinium macrocarpon HOM05D005362 ORTHO05D006895 9.4e-06 56.2 142 28.2


User provided reference genes

Program Settings