Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 1.9e-212 742.3 373 100.0
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 6.0e-179 630.9 355 89.9
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 2.1e-168 595.9 389 79.4
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 3.9e-162 575.1 363 79.6
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 1.5e-158 563.1 356 80.1
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 3.4e-158 562.0 362 78.5
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 1.8e-151 539.7 332 80.4
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 1.5e-150 536.6 342 77.2
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 3.4e-150 535.4 374 73.0
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 5.0e-149 531.6 353 75.9
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 2.5e-148 529.3 351 74.9
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 3.2e-148 528.9 355 74.9
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 9.4e-148 527.3 351 74.9
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 1.8e-146 523.1 344 76.2
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 3.9e-146 521.9 373 72.1
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 6.7e-146 521.2 353 74.2
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 1.1e-145 520.4 341 76.5
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 2.0e-145 519.6 335 75.5
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.0e-145 519.6 374 71.1
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 4.4e-145 518.5 358 72.9
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 5.7e-145 518.1 351 73.2
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 7.4e-145 517.7 355 72.4
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 9.7e-145 517.3 350 72.3
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 1.3e-144 516.9 360 71.4
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 1.3e-144 516.9 369 71.8
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.3e-144 516.9 346 73.7
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 1.7e-144 516.5 359 72.4
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 1.7e-144 516.5 341 74.5
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 1.7e-144 516.5 346 73.7
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 2.2e-144 516.2 369 71.8
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 2.2e-144 516.2 346 73.4
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 2.8e-144 515.8 341 74.5
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 6.3e-144 514.6 359 71.9
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.4e-143 513.5 352 72.4
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 1.4e-143 513.5 362 72.4
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 1.8e-143 513.1 358 72.1
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.8e-143 513.1 368 70.9
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 2.4e-143 512.7 372 71.2
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 4.1e-143 511.9 352 72.7
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 5.3e-143 511.5 337 73.3
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 1.2e-142 510.4 362 72.1
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 1.2e-142 510.4 361 72.3
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 2.0e-142 509.6 355 71.8
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 3.5e-142 508.8 355 71.3
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 5.9e-142 508.1 366 70.8
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 5.9e-142 508.1 362 70.7
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 5.9e-142 508.1 362 70.7
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 7.7e-142 507.7 359 71.0
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 7.7e-142 507.7 365 70.4
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 1.7e-141 506.5 389 67.9
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.7e-141 506.5 389 67.9
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.7e-141 506.5 358 71.5
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 2.9e-141 505.8 377 68.4
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 5.0e-141 505.0 366 70.5
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.0e-141 505.0 373 69.4
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 6.5e-141 504.6 366 70.5
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 6.5e-141 504.6 366 70.5
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 6.5e-141 504.6 373 69.4
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.5e-140 503.4 340 75.3
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 1.9e-140 503.1 372 70.2
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.9e-140 503.1 358 70.4
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 2.5e-140 502.7 358 70.4
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 3.2e-140 502.3 356 72.2
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 3.2e-140 502.3 367 69.8
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 3.2e-140 502.3 318 76.1
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 4.2e-140 501.9 345 73.0
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 4.2e-140 501.9 360 72.2
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 1.6e-139 500.0 347 72.3
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 1.6e-139 500.0 377 69.2
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 2.7e-139 499.2 335 73.1
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 3.6e-139 498.8 362 69.3
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 3.6e-139 498.8 349 71.1
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.6e-139 498.8 351 70.9
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 6.1e-139 498.0 336 74.1
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 6.1e-139 498.0 358 70.4
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 8.0e-139 497.7 368 69.0
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 8.0e-139 497.7 374 67.6
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 8.0e-139 497.7 329 73.9
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 8.8e-138 494.2 350 70.6
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 3.3e-137 492.3 360 68.9
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 3.3e-137 492.3 372 68.0
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 3.3e-137 492.3 358 69.0
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 4.4e-137 491.9 332 73.8
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 5.7e-137 491.5 362 68.8
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 5.7e-137 491.5 362 68.8
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 5.7e-137 491.5 367 68.4
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 5.7e-137 491.5 325 73.2
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 7.5e-137 491.1 338 73.4
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 9.7e-137 490.7 359 69.6
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 1.3e-136 490.3 332 73.2
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 1.3e-136 490.3 304 77.6
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 2.2e-136 489.6 318 74.2
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 2.2e-136 489.6 355 68.5
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 2.8e-136 489.2 371 67.9
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 3.7e-136 488.8 340 72.9
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 3.7e-136 488.8 351 70.1
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 4.8e-136 488.4 361 68.4
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 6.3e-136 488.0 349 70.5
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 8.2e-136 487.6 352 70.2
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 3.1e-135 485.7 358 67.6
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 3.1e-135 485.7 342 72.2
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 9.1e-135 484.2 347 71.5
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 1.2e-134 483.8 371 66.8
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.7e-134 482.6 369 65.3
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 1.0e-133 480.7 371 66.6
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 1.0e-133 480.7 371 66.6
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 1.7e-133 479.9 351 68.7
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 1.7e-133 479.9 355 67.0
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 5.0e-133 478.4 321 72.3
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 5.0e-133 478.4 303 76.2
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 8.5e-133 477.6 324 71.6
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 1.1e-132 477.2 366 67.2
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.1e-132 477.2 336 71.4
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 1.5e-132 476.9 356 68.3
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.9e-132 476.5 336 71.4
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 2.5e-132 476.1 363 66.7
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 3.2e-132 475.7 335 69.3
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 4.2e-132 475.3 305 74.1
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.2e-131 473.8 336 71.1
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 3.6e-131 472.2 365 67.4
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.8e-130 469.9 329 70.2
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 3.4e-129 465.7 305 75.1
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 1.8e-127 459.9 453 56.1
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 1.9e-124 449.9 292 73.6
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 2.5e-124 449.5 304 72.4
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 1.3e-120 437.2 336 64.0
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 8.3e-120 434.5 341 64.8
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 8.3e-120 434.5 268 78.0
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.1e-119 434.1 307 72.0
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 7.0e-119 431.4 317 70.0
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.7e-117 426.8 347 64.6
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 3.3e-116 422.5 324 62.0
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 7.3e-116 421.4 281 73.0
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 2.3e-114 416.4 346 62.4
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 4.0e-114 415.6 314 66.9
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 6.8e-114 414.8 369 61.8
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 8.9e-114 414.5 295 70.2
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 2.6e-113 412.9 324 61.1
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.2e-112 409.8 311 63.0
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 1.4e-111 407.1 368 61.7
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 6.6e-109 398.3 259 75.3
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 1.4e-106 390.6 311 61.1
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.8e-106 390.2 376 56.1
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 8.9e-106 387.9 343 58.9
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.9e-104 382.9 309 60.2
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 3.2e-103 379.4 411 52.1
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 2.3e-98 363.2 221 79.6
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 4.9e-96 355.5 361 55.7
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.0e-93 347.8 228 74.1
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 1.2e-86 324.3 298 55.0
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 9.9e-81 304.7 221 67.0
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 2.1e-78 297.0 238 67.6
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 2.2e-64 250.4 352 46.0
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 7.6e-57 225.3 209 59.3
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 6.5e-56 222.2 184 61.4
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 9.0e-50 201.8 183 61.2
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 6.5e-40 169.1 158 55.1
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 5.0e-32 142.9 97 72.2
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 2.6e-25 120.6 279 29.4
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 4.5e-25 119.8 99 60.6
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 3.2e-23 113.6 335 26.9
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.5e-20 104.8 240 33.8
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 2.4e-18 97.4 69 71.0
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 2.4e-18 97.4 69 71.0
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 5.3e-18 96.3 69 71.0
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 9.1e-18 95.5 65 66.2
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 3.8e-16 90.1 328 25.6
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 1.2e-14 85.1 53 75.5
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.1e-14 84.3 63 68.3
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 7.0e-10 69.3 120 36.7
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 5.9e-09 66.2 91 47.3
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 7.7e-09 65.9 90 48.9
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 7.7e-09 65.9 39 74.4
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 1.0e-08 65.5 152 28.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 2.1e-06 57.8 35 74.3
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 2.8e-06 57.4 33 75.8
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 4.7e-06 56.6 33 72.7
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 6.1e-06 56.2 30 80.0


User provided reference genes

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