Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G0039 Erigeron canadensis HOM05D003722 ORTHO05D004589 0.0e+00 1284.6 959 100.0
Lsat_1_v5_gn_8_70661 Lactuca sativa HOM05D003722 ORTHO05D004589 5.9e-287 991.1 921 83.3
HanXRQChr09g0261801 Helianthus annuus HOM05D003722 ORTHO05D004589 2.8e-273 945.7 884 76.0
HanXRQChr05g0135941 Helianthus annuus HOM05D003722 ORTHO05D004589 7.2e-269 931.0 907 78.6
Nitab4.5_0000446g0200 Nicotiana tabacum HOM05D003722 ORTHO05D004589 9.3e-232 807.7 899 69.5
HanXRQChr03g0065591 Helianthus annuus HOM05D003722 ORTHO05D004589 2.1e-231 806.6 932 73.1
Nitab4.5_0002831g0060 Nicotiana tabacum HOM05D003722 ORTHO05D004589 7.8e-231 804.7 907 73.1
Dinv41842 Davidia involucrata HOM05D003722 ORTHO05D004589 1.7e-230 803.5 913 75.4
Peaxi162Scf00486g01029 Petunia axillaris HOM05D003722 ORTHO05D004589 1.7e-230 803.5 912 72.3
CSS0048906 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 8.7e-230 801.2 806 84.1
Solyc08g061820.3 Solanum lycopersicum HOM05D003722 ORTHO05D004589 1.8e-227 793.5 897 71.2
Sopen08g017250 Solanum pennellii HOM05D003722 ORTHO05D004589 1.2e-226 790.8 897 71.1
Hma1.2p1_0836F.1_g225970 Hydrangea macrophylla HOM05D003722 ORTHO05D004589 3.4e-226 789.3 902 74.5
PGSC0003DMG400018806 Solanum tuberosum HOM05D003722 ORTHO05D004589 1.3e-225 787.3 897 72.7
Dinv02138 Davidia involucrata HOM05D003722 ORTHO05D004589 5.4e-224 781.9 944 65.7
Potri.018G048700 Populus trichocarpa HOM05D003722 ORTHO05D004589 6.0e-223 778.5 913 69.4
CSS0013734 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 1.9e-221 773.5 910 73.4
Sabra18G0046400 Salix brachista HOM05D003722 ORTHO05D004589 5.6e-221 771.9 913 68.6
GSVIVG01035469001 Vitis vinifera HOM05D003722 ORTHO05D004589 1.1e-219 767.7 927 67.6
DCAR_004379 Daucus carota HOM05D003722 ORTHO05D004589 7.1e-216 755.0 900 72.8
Prupe.1G404200 Prunus persica HOM05D003722 ORTHO05D004589 7.1e-216 755.0 908 67.2
MD08G1071300 Malus domestica HOM05D003722 ORTHO05D004589 5.1e-214 748.8 903 71.8
Potri.006G220900 Populus trichocarpa HOM05D003722 ORTHO05D004589 1.9e-213 746.9 813 78.1
MD15G1049900 Malus domestica HOM05D003722 ORTHO05D004589 7.4e-213 745.0 900 68.8
Rhsim03G0063100 Rhododendron simsii HOM05D003722 ORTHO05D004589 4.8e-212 742.3 939 69.6
Oeu036060.1 Olea europaea HOM05D003722 ORTHO05D004589 6.2e-212 741.9 804 74.4
DCAR_001223 Daucus carota HOM05D003722 ORTHO05D004589 1.1e-211 741.1 932 70.9
Manes.16G085600 Manihot esculenta HOM05D003722 ORTHO05D004589 2.6e-210 736.5 885 71.8
TAR626G0360 Trochodendron aralioides HOM05D003722 ORTHO05D004589 1.7e-209 733.8 807 77.8
TWI32G0253 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 2.2e-209 733.4 812 75.2
TAR626G0824 Trochodendron aralioides HOM05D003722 ORTHO05D004589 4.9e-209 732.3 807 77.7
Migut.A00079 Erythranthe guttata HOM05D003722 ORTHO05D004589 2.1e-207 726.9 900 72.0
SalBow4G2891 Salvia bowleyana HOM05D003722 ORTHO05D004589 2.1e-207 726.9 888 72.7
CAN.G881.1 Capsicum annuum HOM05D003722 ORTHO05D004589 3.5e-207 726.1 864 69.3
TAR624G1180 Trochodendron aralioides HOM05D003722 ORTHO05D004589 7.9e-207 724.9 807 74.1
QL02p017002 Quercus lobata HOM05D003722 ORTHO05D004589 3.9e-206 722.6 909 70.5
RcHm_v2.0_Chr6g0311801 Rosa chinensis HOM05D003722 ORTHO05D004589 5.1e-206 722.2 908 65.5
Lj7A221G29 Lonicera japonica HOM05D003722 ORTHO05D004589 1.5e-205 720.7 907 63.5
CsaV3_4G036040 Cucumis sativus L. HOM05D003722 ORTHO05D004589 1.6e-204 717.2 919 69.9
Migut.E01781 Erythranthe guttata HOM05D003722 ORTHO05D004589 3.7e-204 716.1 876 70.2
Manes.03G053433 Manihot esculenta HOM05D003722 ORTHO05D004589 6.3e-204 715.3 923 69.9
Medtr1g015450 Medicago truncatula HOM05D003722 ORTHO05D004589 8.2e-204 714.9 812 73.4
Haze_18293 Corylus avellana HOM05D003722 ORTHO05D004589 1.8e-203 713.8 838 72.1
FAN24G1820 Fragaria x ananassa HOM05D003722 ORTHO05D004589 2.4e-203 713.4 913 70.4
FvH4_2g30970 Fragaria vesca HOM05D003722 ORTHO05D004589 4.1e-203 712.6 913 70.3
FAN20G0071 Fragaria x ananassa HOM05D003722 ORTHO05D004589 9.0e-203 711.4 906 70.9
Sabra06G0170700 Salix brachista HOM05D003722 ORTHO05D004589 3.4e-202 709.5 878 69.1
arahy.Tifrunner.gnm1.ann1.JX1TK4 Arachis hypogaea HOM05D003722 ORTHO05D004589 7.6e-202 708.4 938 68.2
TAR636G3697 Trochodendron aralioides HOM05D003722 ORTHO05D004589 7.6e-202 708.4 811 66.8
FAN27G2597 Fragaria x ananassa HOM05D003722 ORTHO05D004589 1.3e-201 707.6 923 60.0
Actinidia27552 Actinidia chinensis HOM05D003722 ORTHO05D004589 3.8e-201 706.1 922 68.4
Phvul.009G081900 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 3.8e-201 706.1 810 73.0
Glyma.17G225800 Glycine max HOM05D003722 ORTHO05D004589 8.4e-201 704.9 812 74.9
TPR.G38933 Trifolium pratense HOM05D003722 ORTHO05D004589 2.5e-200 703.4 840 70.4
Nn6g35614 Nelumbo nucifera HOM05D003722 ORTHO05D004589 1.6e-199 700.7 818 74.4
vmacro07490 Vaccinium macrocarpon HOM05D003722 ORTHO05D004589 6.1e-199 698.7 936 64.3
TWI34G0168 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 1.3e-198 697.6 812 74.8
Sc23g0004200 Simmondsia chinensis HOM05D003722 ORTHO05D004589 2.3e-198 696.8 933 66.2
Aqoxy7G04082 Aquilegia oxysepala HOM05D003722 ORTHO05D004589 5.1e-198 695.7 812 72.5
ClCG05G015740 Citrullus lanatus HOM05D003722 ORTHO05D004589 5.1e-198 695.7 918 69.3
Glyma.14G098900 Glycine max HOM05D003722 ORTHO05D004589 8.7e-198 694.9 851 71.7
Eucgr.C03158 Eucalyptus grandis HOM05D003722 ORTHO05D004589 1.3e-196 691.0 856 71.0
VMungo0647G1341 Vigna mungo HOM05D003722 ORTHO05D004589 1.3e-196 691.0 880 69.5
Ca_13110_v3 Cicer arietinum L. HOM05D003722 ORTHO05D004589 1.6e-196 690.6 817 71.7
SGA_v2.0_scaffold64G21877 Striga asiatica HOM05D003722 ORTHO05D004589 1.8e-195 687.2 897 69.1
MSTRG.25985 Avicennia marina HOM05D003722 ORTHO05D004589 3.1e-195 686.4 883 68.1
Lj5g0007526 Lotus japonicus HOM05D003722 ORTHO05D004589 6.5e-193 678.7 819 72.3
Sed0027838 Sechium edule HOM05D003722 ORTHO05D004589 8.5e-193 678.3 818 74.6
CiPaw.15G091900 Carya illinoinensis HOM05D003722 ORTHO05D004589 1.4e-192 677.6 897 63.8
Ciclev10007327m.g Citrus clementina HOM05D003722 ORTHO05D004589 2.5e-192 676.8 907 67.6
Gohir.A07G019700 Gossypium hirsutum HOM05D003722 ORTHO05D004589 2.5e-192 676.8 895 67.3
Thecc.09G063300 Theobroma cacao HOM05D003722 ORTHO05D004589 2.5e-192 676.8 893 69.0
Gohir.D07G019500 Gossypium hirsutum HOM05D003722 ORTHO05D004589 4.2e-192 676.0 895 67.3
COL.COLO4_21138 Corchorus olitorius HOM05D003722 ORTHO05D004589 6.1e-191 672.2 894 67.3
ATR0598G202 Amborella trichopoda HOM05D003722 ORTHO05D004589 1.0e-190 671.4 806 70.7
arahy.Tifrunner.gnm1.ann1.G8USHK Arachis hypogaea HOM05D003722 ORTHO05D004589 1.0e-190 671.4 811 72.5
Glyma.06G055800 Glycine max HOM05D003722 ORTHO05D004589 6.7e-190 668.7 890 65.4
MBI19_g11832_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 7.4e-189 665.2 811 72.0
Gorai.001G020200 Gossypium raimondii HOM05D003722 ORTHO05D004589 1.7e-188 664.1 899 66.2
Phvul.001G038700 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 2.2e-188 663.7 814 72.2
Nn8g38669 Nelumbo nucifera HOM05D003722 ORTHO05D004589 3.7e-188 662.9 804 73.6
Duzib187G0791 Durio zibethinus HOM05D003722 ORTHO05D004589 1.2e-186 657.9 895 67.4
PSO724G0454 Papaver somniferum HOM05D003722 ORTHO05D004589 5.9e-186 655.6 905 64.1
Lalb_Chr22g0356231 Lupinus albus HOM05D003722 ORTHO05D004589 7.7e-186 655.2 807 71.4
SGA_v2.0_scaffold169G38713 Striga asiatica HOM05D003722 ORTHO05D004589 4.2e-184 649.4 909 66.3
PSO135G0299 Papaver somniferum HOM05D003722 ORTHO05D004589 1.2e-183 647.9 890 64.0
PGR044G0665 Punica granatum HOM05D003722 ORTHO05D004589 7.9e-183 645.2 823 70.0
EL10Ac2g03782 Beta vulgaris HOM05D003722 ORTHO05D004589 5.1e-182 642.5 816 65.6
THA.LOC104803705 Tarenaya hassleriana HOM05D003722 ORTHO05D004589 2.0e-181 640.6 818 68.2
Glyma.04G055700 Glycine max HOM05D003722 ORTHO05D004589 4.8e-180 636.0 895 63.2
VMungo1309G1038 Vigna mungo HOM05D003722 ORTHO05D004589 4.8e-180 636.0 875 65.9
AT4G33210 Arabidopsis thaliana HOM05D003722 ORTHO05D004589 7.0e-179 632.1 805 68.8
Sp7g30950 Schrenkiella parvula HOM05D003722 ORTHO05D004589 7.7e-178 628.6 799 69.6
CANSAT25G1471 Cannabis sativa HOM05D003722 ORTHO05D004589 1.3e-177 627.9 849 67.3
SGA_v2.0_scaffold163G37999 Striga asiatica HOM05D003722 ORTHO05D004589 3.8e-177 626.3 869 65.7
AUR62020586 Chenopodium quinoa HOM05D003722 ORTHO05D004589 5.5e-176 622.5 808 69.1
BraA03t15228Z Brassica rapa HOM05D003722 ORTHO05D004589 2.7e-175 620.2 806 68.5
Atru.chr7.1848 Acer truncatum HOM05D003722 ORTHO05D004589 2.6e-173 613.6 789 71.4
Duzib168G1968 Durio zibethinus HOM05D003722 ORTHO05D004589 1.1e-171 608.2 921 58.3
Sed0000287 Sechium edule HOM05D003722 ORTHO05D004589 1.4e-171 607.8 857 64.8
Lalb_Chr23g0267971 Lupinus albus HOM05D003722 ORTHO05D004589 1.8e-171 607.4 892 55.9
AUR62009080 Chenopodium quinoa HOM05D003722 ORTHO05D004589 2.7e-170 603.6 830 62.9
BcaNung02160 Brassica carinata HOM05D003722 ORTHO05D004589 7.7e-170 602.1 806 67.7
arahy.Tifrunner.gnm1.ann1.V7LPDI Arachis hypogaea HOM05D003722 ORTHO05D004589 6.5e-169 599.0 811 66.8
A01p04970 Brassica napus HOM05D003722 ORTHO05D004589 2.5e-168 597.0 922 62.5
arahy.Tifrunner.gnm1.ann1.V9GZ7C Arachis hypogaea HOM05D003722 ORTHO05D004589 3.2e-168 596.7 811 69.1
BolC7t46400H Brassica oleracea HOM05D003722 ORTHO05D004589 4.2e-168 596.3 809 67.2
BraA01t00479Z Brassica rapa HOM05D003722 ORTHO05D004589 4.2e-168 596.3 923 62.4
Carub.0007s0725 Capsella rubella HOM05D003722 ORTHO05D004589 5.5e-168 595.9 805 67.3
MELO3C016912.2 Cucumis melo HOM05D003722 ORTHO05D004589 1.2e-167 594.7 873 56.6
BcaC09g52132 Brassica carinata HOM05D003722 ORTHO05D004589 8.0e-167 592.0 799 67.7
C01p05420 Brassica napus HOM05D003722 ORTHO05D004589 8.0e-167 592.0 805 67.3
BolC1t00522H Brassica oleracea HOM05D003722 ORTHO05D004589 8.0e-167 592.0 805 67.3
SEGI_30451 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 5.2e-166 589.3 826 65.6
Aa31sc290G30 Aethionema arabicum HOM05D003722 ORTHO05D004589 6.8e-166 589.0 810 66.3
C03p86790 Brassica napus HOM05D003722 ORTHO05D004589 1.8e-163 580.9 792 61.4
Lalb_Chr08g0244821 Lupinus albus HOM05D003722 ORTHO05D004589 7.0e-163 578.9 812 62.9
CARHR241240 Cardamine hirsuta HOM05D003722 ORTHO05D004589 1.6e-162 577.8 805 65.8
Gohir.D06G083100 Gossypium hirsutum HOM05D003722 ORTHO05D004589 1.6e-162 577.8 908 60.1
BcaC01g01002 Brassica carinata HOM05D003722 ORTHO05D004589 3.5e-162 576.6 792 60.6
BolC3t20973H Brassica oleracea HOM05D003722 ORTHO05D004589 3.5e-162 576.6 792 60.6
BraA08t33724Z Brassica rapa HOM05D003722 ORTHO05D004589 4.5e-162 576.2 793 61.4
Hund19422 Selenicereus undatus HOM05D003722 ORTHO05D004589 5.9e-162 575.9 724 63.8
AL7G18350 Arabidopsis lyrata HOM05D003722 ORTHO05D004589 1.3e-161 574.7 805 66.2
BcaB03g12811 Brassica carinata HOM05D003722 ORTHO05D004589 3.8e-161 573.2 800 62.1
Thhalv10024312m.g Eutrema salsugineum HOM05D003722 ORTHO05D004589 5.0e-161 572.8 802 67.0
Medtr1g015480 Medicago truncatula HOM05D003722 ORTHO05D004589 6.1e-159 565.8 782 65.6
unitig_748.g8237 Utricularia gibba HOM05D003722 ORTHO05D004589 5.7e-157 559.3 889 62.8
SEGI_01273 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 3.4e-149 533.5 812 62.9
BolC3t20974H Brassica oleracea HOM05D003722 ORTHO05D004589 4.4e-149 533.1 795 59.4
CiPaw.16G068500 Carya illinoinensis HOM05D003722 ORTHO05D004589 5.7e-149 532.7 739 70.6
Psat6g022880 Pisum sativum HOM05D003722 ORTHO05D004589 1.1e-147 528.5 807 56.9
A08p17740 Brassica napus HOM05D003722 ORTHO05D004589 1.7e-145 521.2 792 58.8
A08p17750 Brassica napus HOM05D003722 ORTHO05D004589 5.6e-144 516.2 802 57.4
Gorai.010G096600 Gossypium raimondii HOM05D003722 ORTHO05D004589 7.3e-144 515.8 830 52.2
BraA08t33725Z Brassica rapa HOM05D003722 ORTHO05D004589 1.2e-143 515.0 802 57.6
HPP92_006154 Vanilla planifolia HOM05D003722 ORTHO05D004589 2.0e-141 507.7 918 56.4
C03p86800 Brassica napus HOM05D003722 ORTHO05D004589 2.4e-139 500.7 795 57.5
TWI39G1239 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 6.0e-138 496.1 741 60.2
Cpa.g.sc126.25 Carica papaya HOM05D003722 ORTHO05D004589 2.2e-132 477.6 684 70.9
Actinidia25690 Actinidia chinensis HOM05D003722 ORTHO05D004589 2.4e-131 474.2 652 79.6
Gohir.A06G081600 Gossypium hirsutum HOM05D003722 ORTHO05D004589 9.5e-128 462.2 690 62.9
Mapoly0202s0013 Marchantia polymorpha HOM05D003722 ORTHO05D004589 9.5e-128 462.2 911 51.9
CDE07G1686 Ceratophyllum demersum HOM05D003722 ORTHO05D004589 6.2e-127 459.5 640 66.6
unitig_4.g30332 Utricularia gibba HOM05D003722 ORTHO05D004589 1.4e-126 458.4 772 47.4
Pp3c5_23900 Physcomitrium patens HOM05D003722 ORTHO05D004589 3.5e-122 443.7 920 48.9
Pp3c12_17410 Physcomitrium patens HOM05D003722 ORTHO05D004589 1.7e-121 441.4 883 46.9
SMO238G0031 Selaginella moellendorffii HOM05D003722 ORTHO05D004589 1.7e-116 424.9 827 52.6
Oeu022303.1 Olea europaea HOM05D003722 ORTHO05D004589 3.5e-114 417.2 929 35.5
Cc08_g01170 Coffea canephora HOM05D003722 ORTHO05D004589 1.1e-112 412.1 487 72.7
MBI13_g31962_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 3.1e-110 404.1 604 63.6
Pp3c6_6070 Physcomitrium patens HOM05D003722 ORTHO05D004589 7.6e-109 399.4 907 45.5
Pp3c4_12360 Physcomitrium patens HOM05D003722 ORTHO05D004589 2.9e-108 397.5 827 54.9
Os10g0396400 Oryza sativa ssp. japonica HOM05D003722 ORTHO05D004589 8.7e-97 359.4 655 62.3
MBI13_g13882_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 3.3e-96 357.5 326 70.9
SalBow1G2799 Salvia bowleyana HOM05D003722 ORTHO05D004589 6.2e-95 353.2 645 68.4
CBR_g11995 Chara braunii HOM05D003722 ORTHO05D004589 3.2e-91 340.9 950 45.1
Sc09g0010110 Simmondsia chinensis HOM05D003722 ORTHO05D004589 1.6e-87 328.6 737 49.4
Zm00001eb048660 Zea mays HOM05D003722 ORTHO05D004589 1.4e-83 315.5 395 54.2
Zm00001eb223490 Zea mays HOM05D003722 ORTHO05D004589 9.7e-80 302.8 413 51.8
AagrBONN_evm.TU.Sc2ySwM_117.2463 Anthoceros agrestis HOM05D003722 ORTHO05D004589 6.5e-76 290.0 582 61.5
SHI18847 Sapria himalayana HOM05D000105 ORTHO05D000023 9.4e-75 286.2 290 59.0
Cc08_g01160 Coffea canephora HOM05D003722 ORTHO05D004589 7.9e-74 283.1 263 65.4
Oeu028128.1 Olea europaea HOM05D003722 ORTHO05D004589 3.8e-68 264.2 304 83.6
Psat3g079480 Pisum sativum HOM05D003722 ORTHO05D004589 3.2e-59 234.6 137 83.2
Ah.11g044300 Amaranthus hybridus HOM05D003722 ORTHO05D004589 3.8e-52 211.1 220 52.3
Actinidia25691 Actinidia chinensis HOM05D003722 ORTHO05D004589 4.7e-50 204.1 230 51.7
Gohir.A06G081780 Gossypium hirsutum HOM05D003722 ORTHO05D004589 1.6e-34 152.5 221 44.8
VMungo0720G2633 Vigna mungo HOM05D003722 ORTHO05D004589 9.8e-32 143.3 88 79.5
Psat5g213240 Pisum sativum HOM05D003722 ORTHO05D004589 7.8e-29 133.7 73 83.6
ECA236G4568 Erigeron canadensis HOM05D000007 ORTHO05D000039 3.3e-27 128.3 66 98.5
VMungo0251G0605 Vigna mungo HOM05D003722 ORTHO05D001926 4.0e-25 121.3 136 51.5
Cpa.g.sc126.26 Carica papaya HOM05D003722 ORTHO05D004589 1.3e-23 116.3 70 77.1
Psat5g114640 Pisum sativum HOM05D003722 ORTHO05D004589 9.9e-16 90.1 183 33.3
Mapoly0101s0054 Marchantia polymorpha HOM05D003722 ORTHO05D004589 1.1e-11 76.6 63 55.6
SalBow1G8614 Salvia bowleyana HOM05D003722 ORTHO05D050768 6.2e-10 70.9 136 68.4


User provided reference genes

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