Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA236G0017 Erigeron canadensis HOM05D003268 ORTHO05D003719 7.0e-133 477.2 233 100.0
HanXRQChr07g0197201 Helianthus annuus HOM05D003268 ORTHO05D003719 1.4e-40 170.6 209 48.3
Lsat_1_v5_gn_9_82161 Lactuca sativa HOM05D050257 ORTHO05D003719 2.9e-30 136.3 221 33.9
CAN.G1248.20 Capsicum annuum HOM05D003268 ORTHO05D003719 2.7e-20 103.2 171 38.6
Dinv30944 Davidia involucrata HOM05D003268 ORTHO05D003719 8.0e-20 101.7 176 36.4
Nitab4.5_0002485g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 8.0e-20 101.7 172 37.2
Oeu023379.1 Olea europaea HOM05D003268 ORTHO05D003719 8.0e-20 101.7 189 31.7
Oeu023377.1 Olea europaea HOM05D003268 ORTHO05D003719 1.0e-19 101.3 189 31.7
Lj5P319T26 Lonicera japonica HOM05D003268 ORTHO05D003719 1.4e-19 100.9 181 33.1
Cc02_g35810 Coffea canephora HOM05D003268 ORTHO05D003719 3.0e-19 99.8 178 34.8
Oeu016542.1 Olea europaea HOM05D003268 ORTHO05D003719 3.0e-19 99.8 189 31.7
SalBow4G1159 Salvia bowleyana HOM05D003268 ORTHO05D003719 3.9e-19 99.4 175 35.4
Nitab4.5_0005904g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 2.0e-18 97.1 173 36.4
unitig_8.g4507 Utricularia gibba HOM05D003268 ORTHO05D003719 7.4e-18 95.1 170 32.9
CSS0047817 Camellia sinensis var. sinensis HOM05D003268 ORTHO05D003719 2.2e-17 93.6 190 33.2
Hma1.2p1_0759F.1_g213940 Hydrangea macrophylla HOM05D003268 ORTHO05D003719 4.8e-17 92.4 161 34.2
Sc16g0009390 Simmondsia chinensis HOM05D003268 ORTHO05D003719 1.4e-16 90.9 175 32.6
HanXRQChr09g0248281 Helianthus annuus HOM05D003268 ORTHO05D003719 1.8e-16 90.5 181 33.7
SGA_v2.0_scaffold22G09705 Striga asiatica HOM05D003268 ORTHO05D003719 4.1e-16 89.4 176 32.4
ECA240G0886 Erigeron canadensis HOM05D003268 ORTHO05D003719 7.0e-16 88.6 215 31.6
Potri.010G002200 Populus trichocarpa HOM05D003268 ORTHO05D003719 9.1e-16 88.2 160 35.0
HanXRQChr09g0250221 Helianthus annuus HOM05D003268 ORTHO05D003719 2.6e-15 86.7 248 27.0
Solyc01g101160.2 Solanum lycopersicum HOM05D003268 ORTHO05D003719 2.6e-15 86.7 171 33.3
Sopen01g044640 Solanum pennellii HOM05D003268 ORTHO05D003719 2.6e-15 86.7 171 33.3
PGSC0003DMG400044126 Solanum tuberosum HOM05D003268 ORTHO05D003719 7.7e-15 85.1 171 33.3
Actinidia11688 Actinidia chinensis HOM05D003268 ORTHO05D003719 1.3e-14 84.3 163 32.5
PSO170G4270 Papaver somniferum HOM05D003268 ORTHO05D003719 1.3e-14 84.3 185 33.5
FvH4_6g08440 Fragaria vesca HOM05D003268 ORTHO05D003719 2.2e-14 83.6 172 30.8
FAN14G0797 Fragaria x ananassa HOM05D003268 ORTHO05D003719 2.2e-14 83.6 172 30.8
Manes.11G020800 Manihot esculenta HOM05D003268 ORTHO05D003719 2.2e-14 83.6 171 31.0
Lj6P701T18 Lonicera japonica HOM05D003268 ORTHO05D003719 2.9e-14 83.2 189 31.7
Cpa.g.sc53.77 Carica papaya HOM05D003268 ORTHO05D003719 5.0e-14 82.4 174 33.3
Manes.08G107700 Manihot esculenta HOM05D003268 ORTHO05D003719 6.5e-14 82.0 185 33.0
TAR636G0250 Trochodendron aralioides HOM05D003268 ORTHO05D003719 6.5e-14 82.0 168 33.3
COL.COLO4_34517 Corchorus olitorius HOM05D003268 ORTHO05D003719 1.1e-13 81.3 204 29.9
MD16G1136300 Malus domestica HOM05D003268 ORTHO05D003719 1.1e-13 81.3 172 33.7
MD13G1139400 Malus domestica HOM05D003268 ORTHO05D003719 1.9e-13 80.5 167 34.1
Sabra10G0001700 Salix brachista HOM05D003268 ORTHO05D003719 1.9e-13 80.5 160 33.8
FAN02G3445 Fragaria x ananassa HOM05D003268 ORTHO05D003719 2.5e-13 80.1 179 29.6
Prupe.1G105300 Prunus persica HOM05D003268 ORTHO05D003719 3.2e-13 79.7 137 33.6
Solyc10g011990.1 Solanum lycopersicum HOM05D003268 ORTHO05D003719 3.2e-13 79.7 188 32.4
Atru.chr4.3150 Acer truncatum HOM05D003268 ORTHO05D003719 4.2e-13 79.3 170 30.6
DCAR_001893 Daucus carota HOM05D003268 ORTHO05D003719 4.2e-13 79.3 190 30.0
TWI56G0501 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 4.2e-13 79.3 164 33.5
Cpa.g.sc48.222 Carica papaya HOM05D003268 ORTHO05D003719 5.5e-13 79.0 228 30.3
THA.LOC104816841 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 5.5e-13 79.0 166 34.3
Duzib212G0032 Durio zibethinus HOM05D003268 ORTHO05D003719 9.4e-13 78.2 184 31.0
Sopen10g005750 Solanum pennellii HOM05D003268 ORTHO05D003719 9.4e-13 78.2 188 31.9
Potri.008G206600 Populus trichocarpa HOM05D003268 ORTHO05D003719 1.2e-12 77.8 131 33.6
QL06p014213 Quercus lobata HOM05D003268 ORTHO05D003719 1.2e-12 77.8 177 31.6
Sabra08G0150300 Salix brachista HOM05D003268 ORTHO05D003719 1.2e-12 77.8 135 33.3
Gohir.D02G064200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 1.6e-12 77.4 195 29.2
Gorai.005G072500 Gossypium raimondii HOM05D003268 ORTHO05D003719 1.6e-12 77.4 195 29.2
Lj5g0018140 Lotus japonicus HOM05D003268 ORTHO05D003719 1.6e-12 77.4 172 29.7
Gohir.A02G058400 Gossypium hirsutum HOM05D003268 ORTHO05D003719 2.1e-12 77.0 231 26.4
Lalb_Chr02g0147571 Lupinus albus HOM05D003268 ORTHO05D003719 2.1e-12 77.0 215 28.4
PGR031G0843 Punica granatum HOM05D003268 ORTHO05D003719 2.1e-12 77.0 187 31.6
CiPaw.01G129300 Carya illinoinensis HOM05D003268 ORTHO05D003719 2.7e-12 76.6 164 31.1
TAR633G0292 Trochodendron aralioides HOM05D003268 ORTHO05D003719 2.7e-12 76.6 170 32.4
Aa31LG8G4410 Aethionema arabicum HOM05D002272 ORTHO05D005405 4.7e-12 75.9 185 29.7
Aqoxy2G02513 Aquilegia oxysepala HOM05D003268 ORTHO05D003719 4.7e-12 75.9 163 31.9
Thecc.04G313000 Theobroma cacao HOM05D003268 ORTHO05D003719 4.7e-12 75.9 186 30.6
Sed0007403 Sechium edule HOM05D003268 ORTHO05D003719 6.1e-12 75.5 169 31.4
THA.LOC104820490 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 8.0e-12 75.1 166 33.1
CiPaw.07G035600 Carya illinoinensis HOM05D003268 ORTHO05D003719 1.0e-11 74.7 180 29.4
RcHm_v2.0_Chr3g0458411 Rosa chinensis HOM05D003268 ORTHO05D003719 1.0e-11 74.7 172 29.7
COL.COLO4_05489 Corchorus olitorius HOM05D003268 ORTHO05D003719 1.4e-11 74.3 163 35.6
Glyma.20G092502 Glycine max HOM05D003268 ORTHO05D003719 1.4e-11 74.3 172 29.1
CANSAT54G2527 Cannabis sativa HOM05D003268 ORTHO05D003719 3.0e-11 73.2 188 29.8
Haze_00767 Corylus avellana HOM05D003268 ORTHO05D003719 4.0e-11 72.8 184 29.3
Sed0010166 Sechium edule HOM05D003268 ORTHO05D003719 4.0e-11 72.8 172 30.8
HPP92_012769 Vanilla planifolia HOM05D003268 ORTHO05D003719 5.2e-11 72.4 206 28.6
ClCG03G017870 Citrullus lanatus HOM05D003268 ORTHO05D003719 6.7e-11 72.0 169 31.4
Haze_03993 Corylus avellana HOM05D003268 ORTHO05D003719 6.7e-11 72.0 154 33.1
Migut.B00893 Erythranthe guttata HOM05D003268 ORTHO05D003719 6.7e-11 72.0 194 25.8
VMungo0720G1780 Vigna mungo HOM05D003268 ORTHO05D003719 6.7e-11 72.0 171 27.5
Aa31LG1G5560 Aethionema arabicum HOM05D003268 ORTHO05D003719 1.5e-10 70.9 175 30.3
PGSC0003DMG401019388 Solanum tuberosum HOM05D003268 ORTHO05D003719 1.5e-10 70.9 182 30.2
Glyma.13G118100 Glycine max HOM05D003268 ORTHO05D003719 3.3e-10 69.7 154 29.9
Ciclev10005819m.g Citrus clementina HOM05D003268 ORTHO05D003719 7.5e-10 68.6 186 30.6
QL03p010269 Quercus lobata HOM05D003268 ORTHO05D003719 7.5e-10 68.6 190 30.5
QL03p010503 Quercus lobata HOM05D003268 ORTHO05D003719 7.5e-10 68.6 190 30.5
Sp3g15630 Schrenkiella parvula HOM05D003268 ORTHO05D003719 7.5e-10 68.6 178 27.0
Sed0001415 Sechium edule HOM05D003268 ORTHO05D003719 9.7e-10 68.2 142 31.0
MELO3C015242.2 Cucumis melo HOM05D003268 ORTHO05D003719 1.7e-09 67.4 159 31.4
SEGI_18442 Sequoiadendron giganteum HOM05D003268 ORTHO05D003719 2.8e-09 66.6 204 26.5
Glyma.17G041900 Glycine max HOM05D003268 ORTHO05D003719 3.7e-09 66.2 155 30.3
PGSC0003DMG400044873 Solanum tuberosum HOM05D003268 ORTHO05D003719 4.8e-09 65.9 165 29.7
CsaV3_1G038030 Cucumis sativus L. HOM05D003268 ORTHO05D003719 6.3e-09 65.5 161 30.4
BcaB06g25842 Brassica carinata HOM05D003268 ORTHO05D003719 1.8e-08 63.9 192 27.1
Dinv29508 Davidia involucrata HOM05D003268 ORTHO05D003719 1.8e-08 63.9 171 28.7
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 2.4e-08 63.5 212 29.7
BcaC09g48706 Brassica carinata HOM05D003268 ORTHO05D003719 5.3e-08 62.4 159 26.4
BolC1t04640H Brassica oleracea HOM05D003268 ORTHO05D003719 5.3e-08 62.4 159 26.4
Ciclev10013870m.g Citrus clementina HOM05D003268 ORTHO05D003719 2.7e-07 60.1 144 31.2
C01p46720 Brassica napus HOM05D003268 ORTHO05D003719 3.5e-07 59.7 119 28.6
VMungo1215G0793 Vigna mungo HOM05D003268 ORTHO05D003719 4.5e-07 59.3 152 28.9


User provided reference genes

Program Settings