Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G4770 Erigeron canadensis HOM05D000966 ORTHO05D007323 1.2e-67 259.6 125 100.0
ECA233G6088 Erigeron canadensis HOM05D000966 ORTHO05D007323 9.8e-17 90.5 49 89.8
HanXRQChr08g0226091 Helianthus annuus HOM05D000966 ORTHO05D007323 9.2e-15 84.0 49 83.7
Lsat_1_v5_gn_8_521 Lactuca sativa HOM05D000966 ORTHO05D007323 8.6e-13 77.4 49 77.6
Dinv25888 Davidia involucrata HOM05D000044 ORTHO05D002853 6.2e-11 71.2 48 70.8
Hma1.2p1_0081F.1_g042500 Hydrangea macrophylla HOM05D000966 ORTHO05D007323 6.2e-11 71.2 67 52.2
GSVIVG01034572001 Vitis vinifera HOM05D000966 ORTHO05D007323 2.3e-10 69.3 49 63.3
Cpa.g.sc49.86 Carica papaya HOM05D000966 ORTHO05D007323 4.0e-10 68.6 67 55.2
Duzib116G0132 Durio zibethinus HOM05D000966 ORTHO05D007323 8.9e-10 67.4 55 65.5
ClCG08G008820 Citrullus lanatus HOM05D000966 ORTHO05D007323 1.2e-09 67.0 49 67.3
Os04g0429100 Oryza sativa ssp. japonica HOM05D000966 ORTHO05D007323 1.2e-09 67.0 50 62.0
Thecc.08G157600 Theobroma cacao HOM05D000966 ORTHO05D007323 1.2e-09 67.0 55 65.5
Aa31LG4G6790 Aethionema arabicum HOM05D000966 ORTHO05D007323 1.5e-09 66.6 49 67.3
COL.COLO4_13799 Corchorus olitorius HOM05D000966 ORTHO05D007323 1.5e-09 66.6 48 70.8
Nitab4.5_0000617g0300 Nicotiana tabacum HOM05D000966 ORTHO05D007323 1.5e-09 66.6 44 70.5
Nitab4.5_0000949g0070 Nicotiana tabacum HOM05D000966 ORTHO05D007323 1.5e-09 66.6 44 70.5
C06p50930 Brassica napus HOM05D000966 ORTHO05D007323 2.0e-09 66.2 62 53.2
Ciclev10000952m.g Citrus clementina HOM05D000966 ORTHO05D007323 2.0e-09 66.2 67 52.2
Sc20g0003630 Simmondsia chinensis HOM05D000966 ORTHO05D007323 2.0e-09 66.2 49 65.3
Lj4C702T3 Lonicera japonica HOM05D000966 ORTHO05D007323 2.6e-09 65.9 49 63.3
TAR381G1161 Trochodendron aralioides HOM05D000966 ORTHO05D007323 3.4e-09 65.5 49 63.3
ATR0584G286 Amborella trichopoda HOM05D000966 ORTHO05D007323 4.4e-09 65.1 66 50.0
CARHR070260 Cardamine hirsuta HOM05D000966 ORTHO05D007323 4.4e-09 65.1 49 63.3
Sed0009464 Sechium edule HOM05D000966 ORTHO05D007323 4.4e-09 65.1 49 63.3
Thhalv10018466m.g Eutrema salsugineum HOM05D000966 ORTHO05D007323 5.8e-09 64.7 49 63.3
Peaxi162Scf01038g00145 Petunia axillaris HOM05D000966 ORTHO05D007323 7.5e-09 64.3 44 65.9
CsaV3_6G005070 Cucumis sativus L. HOM05D000966 ORTHO05D007323 9.9e-09 63.9 49 63.3
Gohir.A06G111200 Gossypium hirsutum HOM05D000966 ORTHO05D007323 9.9e-09 63.9 49 63.3
arahy.Tifrunner.gnm1.ann1.83HUSC Arachis hypogaea HOM05D000966 ORTHO05D007323 1.3e-08 63.5 49 63.3
arahy.Tifrunner.gnm1.ann1.Z2GQ5K Arachis hypogaea HOM05D000966 ORTHO05D007323 1.3e-08 63.5 49 63.3
Eucgr.F02689 Eucalyptus grandis HOM05D000966 ORTHO05D007323 1.3e-08 63.5 49 61.2
Gohir.D06G115100 Gossypium hirsutum HOM05D000966 ORTHO05D007323 1.3e-08 63.5 49 63.3
HPP92_009293 Vanilla planifolia HOM05D000966 ORTHO05D007323 1.3e-08 63.5 45 66.7
AL2G36860 Arabidopsis lyrata HOM05D000966 ORTHO05D007323 1.7e-08 63.2 49 61.2
AT1G76710 Arabidopsis thaliana HOM05D000966 ORTHO05D007323 1.7e-08 63.2 49 61.2
BolC6t40119H Brassica oleracea HOM05D000966 ORTHO05D007323 1.7e-08 63.2 53 60.4
BraA07t31764Z Brassica rapa HOM05D000966 ORTHO05D007323 1.7e-08 63.2 53 60.4
MELO3C008329.2 Cucumis melo HOM05D000966 ORTHO05D007323 1.7e-08 63.2 49 63.3
TWI34G1291 Tripterygium wilfordii HOM05D000966 ORTHO05D007323 1.7e-08 63.2 67 52.2
Zm00001eb082920 Zea mays HOM05D000966 ORTHO05D007323 1.7e-08 63.2 50 54.0
PGR042G2706 Punica granatum HOM05D000966 ORTHO05D007323 2.2e-08 62.8 49 61.2
Hund26681 Selenicereus undatus HOM05D000966 ORTHO05D007323 2.2e-08 62.8 49 57.1
Atru.chr13.2052 Acer truncatum HOM05D000966 ORTHO05D007323 2.9e-08 62.4 56 53.6
Ah.02g124940 Amaranthus hybridus HOM05D000966 ORTHO05D007323 2.9e-08 62.4 65 49.2
MSTRG.22010 Avicennia marina HOM05D000966 ORTHO05D007323 2.9e-08 62.4 71 46.5
EL10Ac1g01592 Beta vulgaris HOM05D000966 ORTHO05D007323 2.9e-08 62.4 49 57.1
Migut.N03097 Erythranthe guttata HOM05D000966 ORTHO05D007323 2.9e-08 62.4 48 60.4
Gorai.010G131600 Gossypium raimondii HOM05D000966 ORTHO05D007323 2.9e-08 62.4 49 61.2
PSO170G0768 Papaver somniferum HOM05D000966 ORTHO05D007323 2.9e-08 62.4 49 59.2
Sp5g31860 Schrenkiella parvula HOM05D000966 ORTHO05D007323 2.9e-08 62.4 49 61.2
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 2.9e-08 62.4 48 62.5
BcaC08g47180 Brassica carinata HOM05D001345 ORTHO05D001190 3.7e-08 62.0 49 61.2
Carub.0002s2362 Capsella rubella HOM05D000966 ORTHO05D007323 3.7e-08 62.0 49 59.2
Nn3g18699 Nelumbo nucifera HOM05D000966 ORTHO05D007323 3.7e-08 62.0 55 58.2
VMungo0720G0673 Vigna mungo HOM05D000966 ORTHO05D007323 3.7e-08 62.0 50 58.0
BcaC08g47221 Brassica carinata HOM05D000966 ORTHO05D007323 4.9e-08 61.6 49 61.2
AUR62026672 Chenopodium quinoa HOM05D000966 ORTHO05D007323 4.9e-08 61.6 49 57.1
AUR62040579 Chenopodium quinoa HOM05D000966 ORTHO05D007323 4.9e-08 61.6 49 57.1
Lalb_Chr02g0141501 Lupinus albus HOM05D000966 ORTHO05D007323 4.9e-08 61.6 49 61.2
Solyc07g008460.3 Solanum lycopersicum HOM05D000966 ORTHO05D007323 4.9e-08 61.6 44 65.9
Sopen07g004390 Solanum pennellii HOM05D000966 ORTHO05D007323 4.9e-08 61.6 44 65.9
CDE12G0409 Ceratophyllum demersum HOM05D000966 ORTHO05D007323 6.4e-08 61.2 50 58.0
Peaxi162Scf00088g00919 Petunia axillaris HOM05D000966 ORTHO05D007323 6.4e-08 61.2 44 63.6
A07p42370 Brassica napus HOM05D000966 ORTHO05D007323 8.3e-08 60.8 49 61.2
A07p42380 Brassica napus HOM05D000966 ORTHO05D007323 8.3e-08 60.8 49 61.2
Cfa018294 Carpinus fangiana HOM05D000966 ORTHO05D007323 8.3e-08 60.8 49 61.2
Glyma.10G222800 Glycine max HOM05D000966 ORTHO05D007323 8.3e-08 60.8 45 64.4
Glyma.20G168900 Glycine max HOM05D000966 ORTHO05D007323 8.3e-08 60.8 45 64.4
Haze_17793 Corylus avellana HOM05D000966 ORTHO05D007323 1.1e-07 60.5 51 58.8
QL02p038471 Quercus lobata HOM05D000966 ORTHO05D007323 1.1e-07 60.5 66 50.0
Aqoxy4G02511 Aquilegia oxysepala HOM05D000966 ORTHO05D007323 1.4e-07 60.1 49 55.1
Phvul.007G082400 Phaseolus vulgaris HOM05D000966 ORTHO05D007323 1.4e-07 60.1 49 57.1
PGSC0003DMG400010972 Solanum tuberosum HOM05D000966 ORTHO05D007323 1.4e-07 60.1 44 63.6
SalBow6G0098 Salvia bowleyana HOM05D000966 ORTHO05D007323 1.9e-07 59.7 53 52.8
Ca_10671_v3 Cicer arietinum L. HOM05D000966 ORTHO05D007323 2.4e-07 59.3 57 56.1
DCAR_001155 Daucus carota HOM05D000966 ORTHO05D007323 2.4e-07 59.3 48 56.2
Lj5g0028132 Lotus japonicus HOM05D000966 ORTHO05D007323 2.4e-07 59.3 63 50.8
PSO700G0340 Papaver somniferum HOM05D000966 ORTHO05D007323 2.4e-07 59.3 49 55.1
Prupe.8G038500 Prunus persica HOM05D000966 ORTHO05D007323 2.4e-07 59.3 59 55.9
FAN01G0621 Fragaria x ananassa HOM05D000966 ORTHO05D007323 3.2e-07 58.9 66 48.5
FAN03G0153 Fragaria x ananassa HOM05D000966 ORTHO05D007323 3.2e-07 58.9 66 48.5
Manes.12G141700 Manihot esculenta HOM05D000966 ORTHO05D007323 3.2e-07 58.9 62 48.4
MD05G1031500 Malus domestica HOM05D000966 ORTHO05D007323 4.1e-07 58.5 45 62.2
RcHm_v2.0_Chr1g0329491 Rosa chinensis HOM05D000966 ORTHO05D007323 4.1e-07 58.5 49 57.1
Oeu020493.1 Olea europaea HOM05D000966 ORTHO05D007323 5.4e-07 58.2 48 56.2
unitig_18.g30053 Utricularia gibba HOM05D000966 ORTHO05D007323 5.4e-07 58.2 53 50.9
unitig_8.g4809 Utricularia gibba HOM05D000966 ORTHO05D007323 5.4e-07 58.2 53 50.9
MD10G1033100 Malus domestica HOM05D000966 ORTHO05D007323 7.1e-07 57.8 45 60.0
Medtr1g098000 Medicago truncatula HOM05D000966 ORTHO05D007323 7.1e-07 57.8 57 52.6
Potri.005G195400 Populus trichocarpa HOM05D000966 ORTHO05D007323 7.1e-07 57.8 49 53.1
TPR.G17050 Trifolium pratense HOM05D000966 ORTHO05D007323 7.1e-07 57.8 57 54.4
Sabra05G0148900 Salix brachista HOM05D000966 ORTHO05D007323 9.2e-07 57.4 67 44.8
CAN.G555.11 Capsicum annuum HOM05D000966 ORTHO05D007323 1.2e-06 57.0 63 50.8
Psat6g191160 Pisum sativum HOM05D000966 ORTHO05D007323 1.2e-06 57.0 57 54.4
Actinidia17776 Actinidia chinensis HOM05D000966 ORTHO05D007323 1.6e-06 56.6 49 53.1
CANSAT25G2301 Cannabis sativa HOM05D000966 ORTHO05D007323 1.6e-06 56.6 48 58.3
Medtr1g098370 Medicago truncatula HOM05D000966 ORTHO05D007323 1.6e-06 56.6 57 52.6
THA.LOC104812030 Tarenaya hassleriana HOM05D000966 ORTHO05D007323 1.6e-06 56.6 56 55.4
CiPaw.15G013800 Carya illinoinensis HOM05D000966 ORTHO05D007323 3.5e-06 55.5 64 45.3


User provided reference genes

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