Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 4.8e-146 521.2 266 100.0
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 4.1e-129 464.9 266 89.8
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 2.1e-117 426.0 243 87.7
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 1.2e-112 410.2 247 82.6
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 2.0e-112 409.5 266 77.8
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 3.5e-112 408.7 266 76.7
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 5.0e-111 404.8 266 75.9
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 1.1e-110 403.7 258 77.1
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 1.5e-110 403.3 265 75.1
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 1.9e-110 402.9 266 74.1
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 3.2e-110 402.1 266 75.6
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 4.2e-110 401.7 269 74.0
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.2e-109 400.2 247 79.4
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 2.1e-109 399.4 249 78.7
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 4.7e-109 398.3 266 74.1
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 1.0e-108 397.1 266 73.3
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 1.8e-108 396.4 243 81.1
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 1.8e-108 396.4 266 75.6
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 2.3e-108 396.0 254 76.4
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 4.0e-108 395.2 266 75.2
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 5.2e-108 394.8 267 74.5
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 5.2e-108 394.8 266 73.3
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 9.8e-107 390.6 263 74.5
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 9.8e-107 390.6 266 72.9
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 1.3e-106 390.2 246 79.3
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 1.7e-106 389.8 275 72.0
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 2.2e-106 389.4 269 74.3
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 2.2e-106 389.4 267 73.8
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 2.8e-106 389.0 270 74.4
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 3.7e-106 388.7 266 73.3
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 3.7e-106 388.7 271 74.2
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 1.1e-105 387.1 271 73.4
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 1.4e-105 386.7 246 76.8
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 1.4e-105 386.7 271 73.4
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 2.4e-105 386.0 247 76.5
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 5.4e-105 384.8 264 72.3
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 5.4e-105 384.8 266 72.2
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 1.2e-104 383.6 266 71.4
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 1.6e-104 383.3 245 76.3
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 2.7e-104 382.5 266 71.8
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 2.7e-104 382.5 265 71.7
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 3.5e-104 382.1 266 71.1
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 3.5e-104 382.1 253 73.9
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 1.3e-103 380.2 263 72.2
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.3e-103 380.2 247 76.1
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 1.3e-103 380.2 234 78.6
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 1.7e-103 379.8 266 70.7
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 1.7e-103 379.8 266 71.1
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 2.3e-103 379.4 266 71.1
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 2.3e-103 379.4 266 72.2
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 2.9e-103 379.0 262 72.5
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 3.8e-103 378.6 248 74.2
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 3.8e-103 378.6 251 73.7
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 5.0e-103 378.3 245 76.7
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 5.0e-103 378.3 220 82.7
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 1.9e-102 376.3 265 70.6
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 1.9e-102 376.3 244 75.8
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 5.6e-102 374.8 267 70.8
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 9.5e-102 374.0 262 71.4
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 9.5e-102 374.0 251 71.7
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 9.5e-102 374.0 266 71.8
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 1.6e-101 373.2 245 74.3
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 3.6e-101 372.1 265 70.9
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 6.1e-101 371.3 303 64.4
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 1.0e-100 370.5 349 57.3
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 2.3e-100 369.4 273 69.6
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 3.0e-100 369.0 265 72.5
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 3.0e-100 369.0 236 76.7
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 4.0e-100 368.6 247 73.7
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 6.8e-100 367.9 244 74.2
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 1.2e-99 367.1 229 78.2
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.5e-99 366.7 282 68.4
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 2.0e-99 366.3 256 72.3
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 2.0e-99 366.3 256 72.3
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 2.6e-99 365.9 235 76.6
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 2.6e-99 365.9 263 69.2
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 5.7e-99 364.8 238 75.6
SGA_v2.0_scaffold80G25867 Striga asiatica HOM05D004157 ORTHO05D004860 1.3e-98 363.6 235 77.0
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 6.4e-98 361.3 234 76.5
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 6.4e-98 361.3 249 74.7
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 8.3e-98 360.9 284 66.9
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 2.4e-97 359.4 266 66.5
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 3.2e-97 359.0 235 74.0
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 9.2e-97 357.5 246 71.5
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 7.8e-96 354.4 247 69.6
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 7.8e-96 354.4 247 70.0
Sp7g32610 Schrenkiella parvula HOM05D004157 ORTHO05D004860 1.0e-95 354.0 247 69.2
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 3.0e-95 352.4 221 78.3
Carub.0007s0065 Capsella rubella HOM05D004157 ORTHO05D004860 8.6e-95 350.9 268 64.9
AL7G10670 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 1.9e-94 349.7 265 64.2
AL7G16370 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 2.5e-94 349.4 247 67.2
VMungo1309G1253 Vigna mungo HOM05D004157 ORTHO05D004860 2.5e-94 349.4 245 71.0
CARHR243130 Cardamine hirsuta HOM05D004157 ORTHO05D004860 4.3e-94 348.6 247 68.4
AUR62010110 Chenopodium quinoa HOM05D004157 ORTHO05D004860 1.6e-93 346.7 339 58.7
Aa31LG2G15700 Aethionema arabicum HOM05D004157 ORTHO05D004860 3.6e-93 345.5 247 68.0
AT4G38800 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 4.7e-93 345.1 252 65.5
A08p16520 Brassica napus HOM05D004157 ORTHO05D004860 4.7e-93 345.1 247 67.6
Carub.0007s0546 Capsella rubella HOM05D004157 ORTHO05D004860 6.2e-93 344.7 248 66.5
Thhalv10025990m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 6.2e-93 344.7 267 63.3
BcaC01g00866 Brassica carinata HOM05D004157 ORTHO05D004860 2.3e-92 342.8 247 67.2
CARHR247930 Cardamine hirsuta HOM05D004157 ORTHO05D004860 4.0e-92 342.0 265 63.0
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 4.0e-92 342.0 213 78.4
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 4.0e-92 342.0 244 66.8
Aa31LG6G16410 Aethionema arabicum HOM05D004157 ORTHO05D004860 1.5e-91 340.1 291 60.8
BcaB03g11807 Brassica carinata HOM05D004157 ORTHO05D004860 2.6e-91 339.3 247 66.4
C03p85360 Brassica napus HOM05D004157 ORTHO05D004860 3.4e-91 339.0 247 66.4
BcaC01g00256 Brassica carinata HOM05D004157 ORTHO05D004860 4.4e-91 338.6 262 63.4
BolC3t20826H Brassica oleracea HOM05D004157 ORTHO05D004860 9.8e-91 337.4 247 66.4
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 6.4e-90 334.7 246 69.5
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 1.1e-89 334.0 213 76.5
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 2.4e-89 332.8 265 64.2
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 3.2e-89 332.4 212 75.9
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 4.1e-89 332.0 266 64.7
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 5.4e-89 331.6 213 76.1
BraA08t34357Z Brassica rapa HOM05D004157 ORTHO05D004860 5.4e-89 331.6 271 60.9
A08p24000 Brassica napus HOM05D004157 ORTHO05D004860 7.0e-89 331.3 258 63.2
BcaB03g12226 Brassica carinata HOM05D004157 ORTHO05D004860 9.2e-89 330.9 262 61.5
C03p77330 Brassica napus HOM05D004157 ORTHO05D004860 9.2e-89 330.9 258 63.2
BolC3t19986H Brassica oleracea HOM05D004157 ORTHO05D004860 2.7e-88 329.3 276 60.1
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 4.6e-88 328.6 266 63.5
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 6.0e-88 328.2 248 66.1
Actinidia27843 Actinidia chinensis HOM05D004157 ORTHO05D004860 3.3e-86 322.4 263 64.3
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 5.6e-86 321.6 247 64.0
SGA_v2.0_scaffold32G13240 Striga asiatica HOM05D004157 ORTHO05D004860 1.2e-83 313.9 265 61.1
Lsat_1_v5_gn_1_62181 Lactuca sativa HOM05D004157 ORTHO05D004860 2.6e-83 312.8 240 63.3
Prupe.8G159500 Prunus persica HOM05D004157 ORTHO05D004860 2.6e-83 312.8 275 60.7
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 1.3e-82 310.5 265 60.0
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 1.3e-82 310.5 243 67.5
vmacro22693 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 6.0e-80 301.6 305 54.1
AT4G34840 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 1.0e-79 300.8 204 70.1
Pp3c14_1450 Physcomitrium patens HOM05D004157 ORTHO05D004860 5.1e-79 298.5 243 62.6
Pp3c1_20870 Physcomitrium patens HOM05D004157 ORTHO05D004860 1.1e-78 297.4 243 62.1
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 2.5e-78 296.2 183 78.1
Sp7g37020 Schrenkiella parvula HOM05D004157 ORTHO05D004860 5.6e-78 295.0 262 59.5
Eucgr.G01750 Eucalyptus grandis HOM05D004157 ORTHO05D004860 7.3e-78 294.7 254 60.2
Rhsim11G0186900 Rhododendron simsii HOM05D004157 ORTHO05D004860 4.7e-77 292.0 206 69.4
Cpa.g.sc37.201 Carica papaya HOM05D004157 ORTHO05D004860 1.2e-75 287.3 266 60.5
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 9.9e-75 284.3 184 77.7
Pp3c26_5320 Physcomitrium patens HOM05D004157 ORTHO05D004860 3.2e-73 279.3 234 60.7
SMO147G0350 Selaginella moellendorffii HOM05D004157 ORTHO05D004860 3.2e-73 279.3 252 56.0
Mapoly0026s0093 Marchantia polymorpha HOM05D004157 ORTHO05D004860 2.7e-72 276.2 265 52.5
Rhsim05G0063700 Rhododendron simsii HOM05D004157 ORTHO05D004860 3.5e-72 275.8 196 75.0
SEGI_37242 Sequoiadendron giganteum HOM05D004157 ORTHO05D004860 2.5e-70 269.6 200 64.5
BraA08t33620Z Brassica rapa HOM05D004157 ORTHO05D004860 6.9e-68 261.5 181 69.6
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis HOM05D004157 ORTHO05D004860 2.6e-67 259.6 256 52.7
PGR042G2276 Punica granatum HOM05D004157 ORTHO05D004860 5.8e-67 258.5 247 56.3
Dinv04975 Davidia involucrata HOM05D000600 ORTHO05D000432 1.0e-63 247.7 139 84.9
Nitab4.5_0000980g0360 Nicotiana tabacum HOM05D004157 ORTHO05D004860 4.9e-58 228.8 147 78.9
vmacro02237 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 7.1e-57 224.9 207 59.9
MCO15G557 Micromonas commoda HOM05D004157 ORTHO05D004860 1.1e-54 217.6 244 48.4
Cre03.g162550 Chlamydomonas reinhardtii HOM05D004157 ORTHO05D004860 1.6e-53 213.8 234 47.4
Rhsim11G0185600 Rhododendron simsii HOM05D004157 ORTHO05D004860 2.6e-51 206.5 187 58.8
SalBow3G1540 Salvia bowleyana HOM05D004157 ORTHO05D004860 6.2e-45 185.3 122 76.2
Rhsim11G0186700 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.4e-44 184.1 166 59.0
Eucgr.L03396 Eucalyptus grandis HOM05D004157 ORTHO05D004860 3.4e-43 179.5 104 80.8
MBI09_g11914_MAGBIO Magnolia biondii HOM05D004157 ORTHO05D004860 1.6e-37 160.6 105 76.2
TAR625G0759 Trochodendron aralioides HOM05D004157 ORTHO05D004860 1.2e-35 154.5 96 81.2
Hma1.2p1_0032F.1_g019710 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 5.9e-35 152.1 148 56.8
PRCOL_00006969 Prasinoderma coloniale HOM05D004157 ORTHO05D004860 2.9e-34 149.8 243 39.1
Haze_02206 Corylus avellana HOM05D000447 ORTHO05D000315 1.2e-27 127.9 84 77.4
TAR625G0858 Trochodendron aralioides HOM05D004157 ORTHO05D004860 1.1e-25 121.3 155 47.7
C07p63580 Brassica napus HOM05D004157 ORTHO05D004860 5.5e-25 119.0 119 51.3
BolC7t46771H Brassica oleracea HOM05D004157 ORTHO05D004860 5.5e-25 119.0 119 51.3
SalBow3G3146 Salvia bowleyana HOM05D004157 ORTHO05D004860 3.0e-23 113.2 95 61.1
Medtr0173s0020 Medicago truncatula HOM05D004157 ORTHO05D004860 1.5e-22 110.9 82 67.1
arahy.Tifrunner.gnm1.ann1.R1P6K1 Arachis hypogaea HOM05D004157 ORTHO05D004860 1.2e-19 101.3 174 36.2
Glyma.04G006001 Glycine max HOM05D004157 ORTHO05D004860 5.9e-19 99.0 66 68.2
Aqoxy6G02338 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 7.2e-17 92.0 84 56.0
CBR_g20180 Chara braunii HOM05D004157 ORTHO05D004860 9.4e-17 91.7 286 29.0
Rhsim01G0041000 Rhododendron simsii HOM05D004157 ORTHO05D004860 6.7e-15 85.5 66 68.2
vmacro02118 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 6.7e-15 85.5 68 60.3
Ca_29445_v3 Cicer arietinum L. HOM05D004157 ORTHO05D148328 1.5e-09 67.8 191 28.3
HPP92_002565 Vanilla planifolia HOM05D004157 ORTHO05D004860 2.5e-09 67.0 123 40.7
Rhsim11G0185500 Rhododendron simsii HOM05D004157 ORTHO05D004860 2.7e-08 63.5 47 53.2
Rhsim05G0183600 Rhododendron simsii HOM05D000190 ORTHO05D000113 3.0e-07 60.1 38 78.9


User provided reference genes

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