Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G4693 Erigeron canadensis HOM05D003337 ORTHO05D003808 1.2e-171 606.3 286 100.0
ECA246G2127 Erigeron canadensis HOM05D003337 ORTHO05D003808 6.5e-157 557.4 331 82.5
Lsat_1_v5_gn_5_30121 Lactuca sativa HOM05D003337 ORTHO05D003808 3.7e-144 515.0 330 77.0
HanXRQChr05g0134851 Helianthus annuus HOM05D003337 ORTHO05D003808 3.5e-142 508.4 326 77.0
Dinv18205 Davidia involucrata HOM05D003337 ORTHO05D003808 2.8e-136 488.8 329 73.6
Dinv05003 Davidia involucrata HOM05D003337 ORTHO05D003808 3.7e-136 488.4 330 73.9
Nitab4.5_0002042g0010 Nicotiana tabacum HOM05D003337 ORTHO05D003808 7.0e-135 484.2 329 72.0
Actinidia14594 Actinidia chinensis HOM05D003337 ORTHO05D003808 9.1e-135 483.8 329 72.6
Hma1.2p1_0243F.1_g101010 Hydrangea macrophylla HOM05D003337 ORTHO05D003808 2.0e-134 482.6 332 72.3
CAN.G130.8 Capsicum annuum HOM05D003337 ORTHO05D003808 2.7e-134 482.3 329 71.7
Solyc06g017970.4 Solanum lycopersicum HOM05D003337 ORTHO05D003808 2.7e-134 482.3 329 71.4
Sopen06g008090 Solanum pennellii HOM05D003337 ORTHO05D003808 2.7e-134 482.3 329 71.4
CSS0014408 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 1.3e-133 479.9 330 72.1
CSS0019364 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 1.3e-133 479.9 330 72.1
Nitab4.5_0004664g0060 Nicotiana tabacum HOM05D003337 ORTHO05D003808 1.3e-133 479.9 332 70.8
TAR636G2033 Trochodendron aralioides HOM05D003337 ORTHO05D003808 3.8e-133 478.4 329 70.2
GSVIVG01035878001 Vitis vinifera HOM05D003337 ORTHO05D003808 5.0e-133 478.0 331 71.9
Potri.006G256400 Populus trichocarpa HOM05D003337 ORTHO05D003808 6.5e-133 477.6 341 69.8
Thecc.09G022400 Theobroma cacao HOM05D003337 ORTHO05D003808 8.5e-133 477.2 332 71.1
Nitab4.5_0000165g0080 Nicotiana tabacum HOM05D003337 ORTHO05D003808 1.9e-132 476.1 329 70.8
Lj7C724G9 Lonicera japonica HOM05D003337 ORTHO05D003808 2.5e-132 475.7 334 72.2
Nn8g39563 Nelumbo nucifera HOM05D003337 ORTHO05D003808 2.5e-132 475.7 331 70.1
CiPaw.08G010200 Carya illinoinensis HOM05D003337 ORTHO05D003808 3.2e-132 475.3 334 71.3
Manes.16G123500 Manihot esculenta HOM05D003337 ORTHO05D003808 3.2e-132 475.3 332 70.8
TAR383G0965 Trochodendron aralioides HOM05D003337 ORTHO05D003808 4.2e-132 474.9 303 74.9
Gohir.D05G058000 Gossypium hirsutum HOM05D003337 ORTHO05D003808 7.2e-132 474.2 336 69.9
Nitab4.5_0001294g0060 Nicotiana tabacum HOM05D003337 ORTHO05D003808 9.4e-132 473.8 330 70.3
Sabra18G0028200 Salix brachista HOM05D003337 ORTHO05D003808 9.4e-132 473.8 340 69.4
Lj1g0009523 Lotus japonicus HOM05D003337 ORTHO05D003808 1.2e-131 473.4 336 70.5
Potri.018G025600 Populus trichocarpa HOM05D003337 ORTHO05D003808 1.2e-131 473.4 340 69.4
Gohir.A05G055900 Gossypium hirsutum HOM05D003337 ORTHO05D003808 1.6e-131 473.0 332 70.5
Gorai.009G059100 Gossypium raimondii HOM05D003337 ORTHO05D003808 1.6e-131 473.0 332 70.5
Peaxi162Scf00136g02012 Petunia axillaris HOM05D003337 ORTHO05D003808 2.1e-131 472.6 336 70.8
CiPaw.07G224800 Carya illinoinensis HOM05D003337 ORTHO05D003808 2.7e-131 472.2 334 71.0
Ciclev10007238m.g Citrus clementina HOM05D003337 ORTHO05D003808 3.6e-131 471.9 330 70.9
Rhsim02G0202500 Rhododendron simsii HOM05D003337 ORTHO05D003808 3.6e-131 471.9 328 71.0
TWI32G1054 Tripterygium wilfordii HOM05D003337 ORTHO05D003808 3.6e-131 471.9 332 70.8
CSS0040129 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 4.7e-131 471.5 329 71.7
Cpa.g.sc217.15 Carica papaya HOM05D003337 ORTHO05D003808 4.7e-131 471.5 332 70.5
COL.COLO4_18879 Corchorus olitorius HOM05D003337 ORTHO05D003808 4.7e-131 471.5 332 70.5
Gohir.D05G057900 Gossypium hirsutum HOM05D003337 ORTHO05D003808 4.7e-131 471.5 332 70.5
Gorai.009G059000 Gossypium raimondii HOM05D003337 ORTHO05D003808 4.7e-131 471.5 332 70.5
Nn2g12124 Nelumbo nucifera HOM05D003337 ORTHO05D003808 4.7e-131 471.5 331 70.1
CANSAT25G2205 Cannabis sativa HOM05D003337 ORTHO05D003808 8.0e-131 470.7 336 70.2
DCAR_001543 Daucus carota HOM05D003337 ORTHO05D003808 8.0e-131 470.7 328 70.4
Gohir.A05G055800 Gossypium hirsutum HOM05D003337 ORTHO05D003808 1.0e-130 470.3 332 70.5
ClCG05G016760 Citrullus lanatus HOM05D003337 ORTHO05D003808 1.8e-130 469.5 331 69.8
MELO3C003713.2 Cucumis melo HOM05D003337 ORTHO05D003808 1.8e-130 469.5 331 69.8
TAR625G0257 Trochodendron aralioides HOM05D003337 ORTHO05D003808 2.3e-130 469.2 328 69.8
CsaV3_3G046270 Cucumis sativus L. HOM05D003337 ORTHO05D003808 6.8e-130 467.6 331 69.5
Glyma.04G065500 Glycine max HOM05D003337 ORTHO05D003808 1.2e-129 466.8 336 69.3
Phvul.009G091900 Phaseolus vulgaris HOM05D003337 ORTHO05D003808 1.2e-129 466.8 335 69.6
Sed0015158 Sechium edule HOM05D003337 ORTHO05D003808 1.5e-129 466.5 331 69.2
MD15G1127100 Malus domestica HOM05D003337 ORTHO05D003808 2.0e-129 466.1 337 69.4
Sed0024031 Sechium edule HOM05D003337 ORTHO05D003808 2.0e-129 466.1 331 69.2
Glyma.06G066900 Glycine max HOM05D003337 ORTHO05D003808 2.6e-129 465.7 336 69.3
TWI34G0528 Tripterygium wilfordii HOM05D003337 ORTHO05D003808 2.6e-129 465.7 332 70.2
VMungo1309G0140 Vigna mungo HOM05D003337 ORTHO05D003808 2.6e-129 465.7 335 69.3
FvH4_2g28850 Fragaria vesca HOM05D003337 ORTHO05D003808 3.4e-129 465.3 340 68.2
Haze_21497 Corylus avellana HOM05D003337 ORTHO05D003808 5.7e-129 464.5 334 68.9
RcHm_v2.0_Chr6g0297611 Rosa chinensis HOM05D003337 ORTHO05D003808 5.7e-129 464.5 334 69.5
Sabra06G0200600 Salix brachista HOM05D003337 ORTHO05D003808 5.7e-129 464.5 342 67.8
FAN24G1139 Fragaria x ananassa HOM05D003337 ORTHO05D003808 7.5e-129 464.2 340 68.2
FAN27G2849 Fragaria x ananassa HOM05D003337 ORTHO05D003808 3.7e-128 461.8 339 68.4
TPR.G3117 Trifolium pratense HOM05D003337 ORTHO05D003808 3.7e-128 461.8 336 69.3
Lalb_Chr23g0268451 Lupinus albus HOM05D003337 ORTHO05D003808 4.9e-128 461.5 332 68.4
Medtr3g106700 Medicago truncatula HOM05D003337 ORTHO05D003808 4.9e-128 461.5 335 68.7
Duzib187G1394 Durio zibethinus HOM05D003337 ORTHO05D003808 8.3e-128 460.7 337 68.8
FAN15G2120 Fragaria x ananassa HOM05D003337 ORTHO05D003808 8.3e-128 460.7 339 68.1
FAN20G0291 Fragaria x ananassa HOM05D003337 ORTHO05D003808 8.3e-128 460.7 339 68.1
Aqoxy7G02409 Aquilegia oxysepala HOM05D003337 ORTHO05D003808 1.1e-127 460.3 336 67.6
Duzib168G1956 Durio zibethinus HOM05D003337 ORTHO05D003808 1.1e-127 460.3 333 70.0
Lalb_Chr11g0063671 Lupinus albus HOM05D003337 ORTHO05D003808 1.8e-127 459.5 335 67.8
Psat5g029560 Pisum sativum HOM05D003337 ORTHO05D003808 2.4e-127 459.1 336 68.5
Thhalv10000009m.g Eutrema salsugineum HOM05D003337 ORTHO05D003808 3.1e-127 458.8 329 68.1
MD08G1156500 Malus domestica HOM05D003337 ORTHO05D003808 3.1e-127 458.8 337 68.2
MBI14_g37827_MAGBIO Magnolia biondii HOM05D003337 ORTHO05D003808 4.1e-127 458.4 332 68.4
arahy.Tifrunner.gnm1.ann1.C340QI Arachis hypogaea HOM05D003337 ORTHO05D003808 5.4e-127 458.0 337 68.0
PGR031G1540 Punica granatum HOM05D003337 ORTHO05D003808 5.4e-127 458.0 343 66.5
arahy.Tifrunner.gnm1.ann1.EV8XFE Arachis hypogaea HOM05D003337 ORTHO05D003808 1.2e-126 456.8 337 67.7
Aa31sc102G10 Aethionema arabicum HOM05D003337 ORTHO05D003808 3.5e-126 455.3 329 68.4
AL4G16700 Arabidopsis lyrata HOM05D003337 ORTHO05D003808 4.5e-126 454.9 329 67.8
AT2G25320 Arabidopsis thaliana HOM05D003337 ORTHO05D003808 5.9e-126 454.5 329 67.8
QL02p021300 Quercus lobata HOM05D003337 ORTHO05D003808 7.7e-126 454.1 361 64.5
Lalb_Chr08g0244181 Lupinus albus HOM05D003337 ORTHO05D003808 1.7e-125 453.0 335 67.5
Sc09g0010250 Simmondsia chinensis HOM05D003337 ORTHO05D003808 1.7e-125 453.0 334 67.1
CDE05G2189 Ceratophyllum demersum HOM05D003337 ORTHO05D003808 2.3e-125 452.6 321 69.2
Eucgr.C01723 Eucalyptus grandis HOM05D003337 ORTHO05D003808 2.3e-125 452.6 331 67.7
Sp4g04460 Schrenkiella parvula HOM05D003337 ORTHO05D003808 5.0e-125 451.4 329 67.2
A04p19680 Brassica napus HOM05D003337 ORTHO05D003808 8.6e-125 450.7 326 67.2
BraA04t17558Z Brassica rapa HOM05D003337 ORTHO05D003808 8.6e-125 450.7 326 67.2
Carub.0004s0499 Capsella rubella HOM05D003337 ORTHO05D003808 1.9e-124 449.5 331 67.1
BcaC07g40870 Brassica carinata HOM05D003337 ORTHO05D003808 4.3e-124 448.4 327 67.3
C04p55320 Brassica napus HOM05D003337 ORTHO05D003808 4.3e-124 448.4 326 67.2
C08p38690 Brassica napus HOM05D003337 ORTHO05D003808 4.3e-124 448.4 327 67.3
BolC8t51439H Brassica oleracea HOM05D003337 ORTHO05D003808 4.3e-124 448.4 327 67.3
SEGI_27941 Sequoiadendron giganteum HOM05D003337 ORTHO05D003808 5.6e-124 448.0 323 69.3
ATR0739G172 Amborella trichopoda HOM05D003337 ORTHO05D003808 7.3e-124 447.6 321 68.8
BcaC02g08354 Brassica carinata HOM05D003337 ORTHO05D003808 7.3e-124 447.6 326 66.9
PSO170G2416 Papaver somniferum HOM05D003337 ORTHO05D003808 7.3e-124 447.6 364 62.6
BcaB08g35177 Brassica carinata HOM05D003337 ORTHO05D003808 1.2e-123 446.8 328 67.1
BolC4t27068H Brassica oleracea HOM05D003337 ORTHO05D003808 1.6e-123 446.4 326 66.9
A09p55690 Brassica napus HOM05D003337 ORTHO05D003808 2.1e-123 446.0 327 67.0
BraA09t40970Z Brassica rapa HOM05D003337 ORTHO05D003808 2.1e-123 446.0 327 67.0
PSO017G4016 Papaver somniferum HOM05D003337 ORTHO05D003808 2.8e-123 445.7 366 62.0
Oeu053108.1 Olea europaea HOM05D003337 ORTHO05D003808 4.7e-123 444.9 334 66.8
CDE02G1979 Ceratophyllum demersum HOM05D003337 ORTHO05D003808 1.4e-122 443.4 319 68.7
EL10Ac2g04195 Beta vulgaris HOM05D003337 ORTHO05D003808 3.0e-122 442.2 356 63.5
Cc08_g00460 Coffea canephora HOM05D003337 ORTHO05D003808 4.0e-122 441.8 331 66.5
SalBow4G0163 Salvia bowleyana HOM05D003337 ORTHO05D003808 4.0e-122 441.8 336 66.4
SGA_v2.0_scaffold64G21955 Striga asiatica HOM05D003337 ORTHO05D003808 3.4e-121 438.7 336 66.1
MSTRG.26016 Avicennia marina HOM05D003337 ORTHO05D003808 9.8e-121 437.2 336 66.1
SHI18538 Sapria himalayana HOM05D003337 ORTHO05D003808 2.2e-120 436.0 329 64.4
Migut.A00028 Erythranthe guttata HOM05D003337 ORTHO05D003808 8.3e-120 434.1 335 65.4
Mapoly0008s0250 Marchantia polymorpha HOM05D003337 ORTHO05D003808 1.1e-119 433.7 320 67.2
Hund25887 Selenicereus undatus HOM05D003337 ORTHO05D003808 2.4e-119 432.6 347 64.0
AUR62012417 Chenopodium quinoa HOM05D003337 ORTHO05D003808 5.4e-119 431.4 283 73.5
AUR62031541 Chenopodium quinoa HOM05D003337 ORTHO05D003808 1.6e-118 429.9 283 73.1
Pp3c2_25380 Physcomitrium patens HOM05D003337 ORTHO05D003808 2.7e-118 429.1 320 66.2
HPP92_015261 Vanilla planifolia HOM05D003337 ORTHO05D003808 2.7e-118 429.1 330 64.8
Ah.16g104580 Amaranthus hybridus HOM05D003337 ORTHO05D003808 5.0e-117 424.9 355 61.7
CBR_g20432 Chara braunii HOM05D003337 ORTHO05D003808 1.4e-114 416.8 329 64.1
BcaB06g28056 Brassica carinata HOM05D003337 ORTHO05D003808 1.8e-114 416.4 326 64.1
ECA247G3242 Erigeron canadensis HOM05D003337 ORTHO05D003808 4.0e-114 415.2 263 77.9
vmacro11183 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 8.9e-114 414.1 328 65.2
Pp3c1_12560 Physcomitrium patens HOM05D003337 ORTHO05D003808 1.5e-113 413.3 320 63.1
SEGI_27956 Sequoiadendron giganteum HOM05D003337 ORTHO05D003808 1.3e-112 410.2 322 62.7
SMO144G0040 Selaginella moellendorffii HOM05D003337 ORTHO05D003808 3.5e-110 402.1 316 63.9
unitig_748.g8275 Utricularia gibba HOM05D003337 ORTHO05D003808 4.4e-105 385.2 307 63.8
AT2G25330 Arabidopsis thaliana HOM05D003337 ORTHO05D003808 4.7e-99 365.2 321 57.3
Pp3c2_25330 Physcomitrium patens HOM05D003337 ORTHO05D003808 2.5e-92 342.8 274 62.4
Pp3c2_25350 Physcomitrium patens HOM05D003337 ORTHO05D003808 4.7e-91 338.6 272 62.1
GSVIVG01015601001 Vitis vinifera HOM05D003337 ORTHO05D003808 4.9e-88 328.6 326 51.2
ECA234G2039 Erigeron canadensis HOM05D003337 ORTHO05D003808 1.2e-86 323.9 219 75.3
Zm00001eb184600 Zea mays HOM05D003337 ORTHO05D003808 2.3e-85 319.7 329 52.0
Dinv41471 Davidia involucrata HOM05D003337 ORTHO05D003808 1.4e-79 300.4 331 49.5
Atru.chr7.2457 Acer truncatum HOM05D003337 ORTHO05D003808 1.7e-72 276.9 221 63.3
Oeu060140.1 Olea europaea HOM05D003337 ORTHO05D003808 2.1e-70 270.0 319 48.9
CSS0042062 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 7.9e-70 268.1 320 45.3
CSS0034669 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 5.1e-69 265.4 320 45.0
CSS0046302 Camellia sinensis var. sinensis HOM05D003337 ORTHO05D003808 1.3e-67 260.8 320 44.1
Thecc.09G133400 Theobroma cacao HOM05D003337 ORTHO05D003808 3.7e-67 259.2 330 43.0
Potri.006G065300 Populus trichocarpa HOM05D003337 ORTHO05D003808 6.0e-62 241.9 323 39.9
Oeu012290.1 Olea europaea HOM05D003337 ORTHO05D003808 2.9e-56 223.0 206 55.8
Atru.chr7.2458 Acer truncatum HOM05D003337 ORTHO05D003808 1.5e-44 184.1 103 86.4
Nn2g13632 Nelumbo nucifera HOM05D003337 ORTHO05D003808 7.4e-36 155.2 88 83.0
Gohir.D06G052600 Gossypium hirsutum HOM05D003337 ORTHO05D003808 7.7e-33 145.2 201 41.3
Gorai.010G061000 Gossypium raimondii HOM05D003337 ORTHO05D003808 3.8e-32 142.9 201 40.8
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 1.0e-24 118.2 148 50.7
ECA247G1102 Erigeron canadensis HOM05D003337 ORTHO05D003808 2.3e-21 107.1 83 65.1
COL.COLO4_35177 Corchorus olitorius HOM05D003337 ORTHO05D003808 5.2e-21 105.9 100 51.0
CARHR116200 Cardamine hirsuta HOM05D003337 ORTHO05D003808 8.8e-21 105.1 234 32.5
Gohir.A06G053550 Gossypium hirsutum HOM05D003337 ORTHO05D003808 8.8e-21 105.1 201 35.8
Prupe.1G482800 Prunus persica HOM05D003337 ORTHO05D003808 2.6e-20 103.6 241 32.4
HanXRQChr05g0145941 Helianthus annuus HOM05D000279 ORTHO05D003808 2.4e-18 97.1 301 25.2
MSTRG.11607 Avicennia marina HOM05D003337 ORTHO05D003808 7.7e-17 92.0 74 64.9
MCO07G778 Micromonas commoda HOM05D003337 ORTHO05D003808 1.6e-14 84.3 245 29.4
QL04p060986 Quercus lobata HOM05D003337 ORTHO05D003808 2.3e-13 80.5 78 50.0
HanXRQChr05g0146221 Helianthus annuus HOM05D000279 ORTHO05D000498 4.0e-13 79.7 214 26.6
Actinidia15666 Actinidia chinensis HOM05D003337 ORTHO05D003808 1.8e-10 70.9 63 57.1
Actinidia14092 Actinidia chinensis HOM05D003337 ORTHO05D003808 2.4e-10 70.5 53 62.3
ECA248G2817 Erigeron canadensis HOM05D000222 ORTHO05D003808 1.7e-08 64.3 114 36.0
vmacro15258 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 2.3e-08 63.9 54 51.9
vmacro22595 Vaccinium macrocarpon HOM05D003337 ORTHO05D003808 2.5e-07 60.5 51 52.9
Ciclev10003625m.g Citrus clementina HOM05D000385 ORTHO05D000269 3.3e-07 60.1 203 26.6
Dinv29520 Davidia involucrata HOM05D000385 ORTHO05D000269 7.3e-07 58.9 220 25.5
ECA232G3517 Erigeron canadensis HOM05D006708 ORTHO05D007178 7.3e-07 58.9 78 43.6
FvH4_7g04741 Fragaria vesca HOM05D000279 ORTHO05D000498 2.1e-06 57.4 118 31.4
FAN06G0166 Fragaria x ananassa HOM05D000279 ORTHO05D000498 2.1e-06 57.4 118 31.4
RcHm_v2.0_Chr1g0330121 Rosa chinensis HOM05D000279 ORTHO05D000498 2.1e-06 57.4 118 30.5
RcHm_v2.0_Chr1g0330151 Rosa chinensis HOM05D000279 ORTHO05D000498 2.1e-06 57.4 118 31.4
QL04p033651 Quercus lobata HOM05D000385 ORTHO05D000269 2.8e-06 57.0 205 26.8
Carub.0005s2509 Capsella rubella HOM05D000279 ORTHO05D000498 3.6e-06 56.6 86 30.2
FvH4_7g04750 Fragaria vesca HOM05D000279 ORTHO05D000498 3.6e-06 56.6 118 30.5
FAN01G2354 Fragaria x ananassa HOM05D000279 ORTHO05D000498 3.6e-06 56.6 118 30.5
FAN03G1959 Fragaria x ananassa HOM05D000279 ORTHO05D000498 3.6e-06 56.6 118 31.4
FAN06G2560 Fragaria x ananassa HOM05D000279 ORTHO05D000498 3.6e-06 56.6 118 30.5
QL04p033804 Quercus lobata HOM05D000385 ORTHO05D000269 3.6e-06 56.6 205 26.3
FAN10G2440 Fragaria x ananassa HOM05D000279 ORTHO05D000498 4.7e-06 56.2 118 30.5
QL04p033916 Quercus lobata HOM05D000385 ORTHO05D000269 8.0e-06 55.5 205 26.3
Thecc.10G121400 Theobroma cacao HOM05D000279 ORTHO05D000498 8.0e-06 55.5 99 32.3


User provided reference genes

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