Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 6.2e-62 240.7 132 100.0
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 7.4e-31 137.5 106 67.0
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 4.8e-30 134.8 113 60.2
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 3.1e-29 132.1 103 63.1
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 1.5e-28 129.8 93 69.9
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 2.0e-28 129.4 90 67.8
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 2.0e-28 129.4 101 59.4
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 2.0e-28 129.4 98 65.3
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 2.6e-28 129.0 80 70.0
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 2.6e-28 129.0 80 70.0
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 3.4e-28 128.6 101 62.4
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 7.7e-28 127.5 70 81.4
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 1.3e-27 126.7 110 59.1
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 1.3e-27 126.7 101 64.4
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 1.7e-27 126.3 101 63.4
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 2.2e-27 125.9 81 70.4
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 2.2e-27 125.9 73 75.3
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 2.2e-27 125.9 104 59.6
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 2.2e-27 125.9 68 80.9
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 3.8e-27 125.2 105 60.0
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 3.8e-27 125.2 87 64.4
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 5.0e-27 124.8 104 59.6
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 6.5e-27 124.4 96 61.5
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 8.5e-27 124.0 95 61.1
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 8.5e-27 124.0 86 69.8
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.1e-26 123.6 103 59.2
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 1.4e-26 123.2 75 69.3
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 1.4e-26 123.2 95 61.1
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 2.5e-26 122.5 84 67.9
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 2.5e-26 122.5 87 64.4
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 2.5e-26 122.5 86 68.6
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 2.5e-26 122.5 86 68.6
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 3.2e-26 122.1 83 65.1
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 4.2e-26 121.7 81 67.9
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 5.5e-26 121.3 87 65.5
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 5.5e-26 121.3 115 54.8
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 7.2e-26 120.9 87 63.2
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 7.2e-26 120.9 114 51.8
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 9.4e-26 120.6 75 69.3
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 9.4e-26 120.6 91 64.8
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 9.4e-26 120.6 80 66.2
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 1.2e-25 120.2 85 68.2
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 1.2e-25 120.2 99 58.6
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 2.1e-25 119.4 104 59.6
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 3.6e-25 118.6 105 57.1
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 4.7e-25 118.2 117 55.6
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 4.7e-25 118.2 117 54.7
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 7.9e-25 117.5 74 71.6
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 7.9e-25 117.5 70 75.7
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 1.0e-24 117.1 99 59.6
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 1.4e-24 116.7 78 65.4
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 1.4e-24 116.7 99 59.6
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 2.3e-24 115.9 76 69.7
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 2.3e-24 115.9 105 58.1
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 3.9e-24 115.2 72 72.2
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 3.9e-24 115.2 102 55.9
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 3.9e-24 115.2 109 52.3
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 5.1e-24 114.8 76 67.1
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 5.1e-24 114.8 85 63.5
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 6.7e-24 114.4 75 72.0
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 8.8e-24 114.0 106 54.7
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 8.8e-24 114.0 104 54.8
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 8.8e-24 114.0 90 64.4
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 8.8e-24 114.0 92 58.7
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 8.8e-24 114.0 59 81.4
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 1.1e-23 113.6 62 80.6
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 1.1e-23 113.6 62 80.6
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 1.1e-23 113.6 76 71.1
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 1.1e-23 113.6 108 54.6
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 1.5e-23 113.2 62 80.6
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 1.5e-23 113.2 72 70.8
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 1.5e-23 113.2 71 73.2
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 1.5e-23 113.2 62 80.6
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 1.5e-23 113.2 103 56.3
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 1.5e-23 113.2 67 74.6
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 1.5e-23 113.2 87 63.2
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 1.5e-23 113.2 102 55.9
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 2.0e-23 112.8 72 70.8
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.0e-23 112.8 106 53.8
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 2.6e-23 112.5 73 68.5
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 2.6e-23 112.5 71 73.2
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 2.6e-23 112.5 62 79.0
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 3.3e-23 112.1 69 69.6
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 3.3e-23 112.1 86 64.0
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 4.4e-23 111.7 84 64.3
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 4.4e-23 111.7 91 60.4
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 4.4e-23 111.7 59 76.3
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 7.4e-23 110.9 84 64.3
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 2.2e-22 109.4 59 74.6
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 4.8e-22 108.2 85 57.6
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 1.8e-21 106.3 111 49.5
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 2.4e-21 105.9 119 47.1
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 5.3e-21 104.8 92 53.3
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 9.1e-21 104.0 104 51.0
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 1.2e-20 103.6 70 70.0
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 2.0e-20 102.8 79 62.0
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 7.7e-20 100.9 54 75.9
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 8.5e-19 97.4 74 62.2
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 9.4e-18 94.0 67 65.7
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.5e-15 86.7 92 44.6
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 2.6e-15 85.9 55 63.6
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 5.7e-15 84.7 56 75.0
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 1.7e-11 73.2 57 56.1


User provided reference genes

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