Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G4574 Erigeron canadensis HOM05D005586 ORTHO05D007044 0.0e+00 1208.0 628 100.0
Lsat_1_v5_gn_5_84680 Lactuca sativa HOM05D005586 ORTHO05D007044 6.8e-300 1033.5 635 84.9
DCAR_017968 Daucus carota HOM05D005586 ORTHO05D007044 1.2e-280 969.5 628 79.3
Lj9P685T24 Lonicera japonica HOM05D005586 ORTHO05D007044 6.2e-277 957.2 633 78.7
Dinv41251 Davidia involucrata HOM05D005586 ORTHO05D007044 7.1e-273 943.7 622 80.5
CSS0030464 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 3.5e-272 941.4 623 79.1
Dinv25464 Davidia involucrata HOM05D005586 ORTHO05D007044 1.7e-271 939.1 629 78.5
CSS0000496 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 4.2e-265 917.9 623 77.7
Rhsim07G0149700 Rhododendron simsii HOM05D005586 ORTHO05D007044 4.2e-265 917.9 627 76.9
Lj7P472T26 Lonicera japonica HOM05D005586 ORTHO05D007044 1.9e-262 909.1 631 73.9
TAR626G0800 Trochodendron aralioides HOM05D005586 ORTHO05D007044 3.1e-260 901.7 634 74.8
TAR383G0761 Trochodendron aralioides HOM05D005586 ORTHO05D007044 4.2e-257 891.3 635 74.3
Cc06_g13260 Coffea canephora HOM05D005586 ORTHO05D007044 1.2e-256 889.8 639 74.0
Peaxi162Scf00231g00064 Petunia axillaris HOM05D005586 ORTHO05D007044 4.6e-256 887.9 643 74.5
Hma1.2p1_1025F.1_g249260 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 1.8e-255 885.9 591 78.3
Nitab4.5_0000730g0080 Nicotiana tabacum HOM05D005586 ORTHO05D007044 5.1e-255 884.4 643 73.9
PGSC0003DMG400011415 Solanum tuberosum HOM05D005586 ORTHO05D007044 9.6e-254 880.2 641 73.8
TWI60G0698 Tripterygium wilfordii HOM05D005586 ORTHO05D007044 9.6e-254 880.2 652 72.7
Solyc10g078790.1 Solanum lycopersicum HOM05D005586 ORTHO05D007044 8.1e-253 877.1 641 73.6
CAN.G1161.32 Capsicum annuum HOM05D005586 ORTHO05D007044 1.8e-252 875.9 647 72.6
Sopen10g029410 Solanum pennellii HOM05D005586 ORTHO05D007044 1.8e-252 875.9 641 73.5
MSTRG.6212 Avicennia marina HOM05D005586 ORTHO05D007044 2.6e-251 872.1 640 73.1
Sed0005590 Sechium edule HOM05D005586 ORTHO05D007044 2.2e-250 869.0 645 72.6
Aqoxy7G02326 Aquilegia oxysepala HOM05D005586 ORTHO05D007044 3.8e-250 868.2 635 72.4
PSO063G4043 Papaver somniferum HOM05D005586 ORTHO05D007044 6.4e-250 867.5 636 70.9
PSO170G6484 Papaver somniferum HOM05D005586 ORTHO05D007044 8.4e-250 867.1 636 70.9
Prupe.2G007900 Prunus persica HOM05D005586 ORTHO05D007044 7.1e-249 864.0 657 70.6
MELO3C017465.2 Cucumis melo HOM05D005586 ORTHO05D007044 1.6e-248 862.8 647 71.6
COL.COLO4_33680 Corchorus olitorius HOM05D005586 ORTHO05D007044 4.6e-248 861.3 643 70.9
Lj4g0013239 Lotus japonicus HOM05D005586 ORTHO05D007044 6.0e-248 860.9 632 71.8
ClCG06G013320 Citrullus lanatus HOM05D005586 ORTHO05D007044 7.9e-248 860.5 647 71.6
Nitab4.5_0004134g0010 Nicotiana tabacum HOM05D005586 ORTHO05D007044 1.8e-247 859.4 640 72.8
CsaV3_1G031580 Cucumis sativus L. HOM05D005586 ORTHO05D007044 8.7e-247 857.1 647 71.3
CiPaw.07G192200 Carya illinoinensis HOM05D005586 ORTHO05D007044 5.6e-246 854.4 647 71.4
Potri.006G168200 Populus trichocarpa HOM05D005586 ORTHO05D007044 7.4e-246 854.0 660 69.1
Sabra06G0129800 Salix brachista HOM05D005586 ORTHO05D007044 9.6e-246 853.6 660 69.7
RcHm_v2.0_Chr4g0402481 Rosa chinensis HOM05D005586 ORTHO05D007044 1.3e-245 853.2 647 70.6
Duzib168G0896 Durio zibethinus HOM05D005586 ORTHO05D007044 1.6e-245 852.8 647 71.4
Nitab4.5_0000455g0040 Nicotiana tabacum HOM05D005586 ORTHO05D007044 4.8e-245 851.3 630 73.3
Sed0016049 Sechium edule HOM05D005586 ORTHO05D007044 1.1e-244 850.1 648 71.1
Ca_21173_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 1.8e-244 849.4 637 70.5
Ca_21222_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 1.8e-244 849.4 637 70.5
Ciclev10007551m.g Citrus clementina HOM05D005586 ORTHO05D007044 3.1e-244 848.6 647 69.1
Atru.chr7.639 Acer truncatum HOM05D005586 ORTHO05D007044 5.3e-244 847.8 647 70.2
Oeu025223.1 Olea europaea HOM05D005586 ORTHO05D007044 6.9e-244 847.4 641 71.0
Migut.J01477 Erythranthe guttata HOM05D005586 ORTHO05D007044 1.5e-243 846.3 641 70.2
FAN08G2362 Fragaria x ananassa HOM05D005586 ORTHO05D007044 2.0e-243 845.9 644 69.6
CANSAT11G2700 Cannabis sativa HOM05D005586 ORTHO05D007044 1.0e-242 843.6 646 69.2
Lalb_Chr12g0199381 Lupinus albus HOM05D005586 ORTHO05D007044 2.9e-242 842.0 640 70.3
FAN18G4074 Fragaria x ananassa HOM05D005586 ORTHO05D007044 3.8e-242 841.6 646 69.5
Cfa013507 Carpinus fangiana HOM05D005586 ORTHO05D007044 8.4e-242 840.5 647 70.2
FvH4_5g27790 Fragaria vesca HOM05D005586 ORTHO05D007044 8.4e-242 840.5 646 69.3
arahy.Tifrunner.gnm1.ann1.F5X18S Arachis hypogaea HOM05D005586 ORTHO05D007044 1.4e-241 839.7 641 71.3
Medtr4g128210 Medicago truncatula HOM05D005586 ORTHO05D007044 1.4e-241 839.7 638 71.0
SGA_v2.0_scaffold17G07909 Striga asiatica HOM05D005586 ORTHO05D007044 1.4e-241 839.7 633 71.2
Gohir.A08G084500 Gossypium hirsutum HOM05D005586 ORTHO05D007044 2.5e-241 839.0 649 69.3
Psat0s509g0200 Pisum sativum HOM05D005586 ORTHO05D007044 3.2e-241 838.6 637 70.5
Nn4g25000 Nelumbo nucifera HOM05D005586 ORTHO05D007044 9.3e-241 837.0 614 72.5
PGR102G3328 Punica granatum HOM05D005586 ORTHO05D007044 9.3e-241 837.0 635 70.2
Cpa.g.sc95.50 Carica papaya HOM05D005586 ORTHO05D007044 1.6e-240 836.3 626 71.1
Haze_22099 Corylus avellana HOM05D005586 ORTHO05D007044 1.6e-240 836.3 645 70.1
Glyma.17G063500 Glycine max HOM05D005586 ORTHO05D007044 4.6e-240 834.7 633 70.5
Glyma.20G083600 Glycine max HOM05D005586 ORTHO05D007044 4.6e-240 834.7 633 70.9
Gorai.004G099900 Gossypium raimondii HOM05D005586 ORTHO05D007044 4.6e-240 834.7 649 69.6
Sc08g0005320 Simmondsia chinensis HOM05D005586 ORTHO05D007044 4.6e-240 834.7 632 71.5
Manes.14G153700 Manihot esculenta HOM05D005586 ORTHO05D007044 7.9e-240 833.9 626 70.8
Oeu009835.1 Olea europaea HOM05D005586 ORTHO05D007044 7.9e-240 833.9 644 69.9
Eucgr.C02307 Eucalyptus grandis HOM05D005586 ORTHO05D007044 1.0e-239 833.6 649 69.0
Ah.14g083790 Amaranthus hybridus HOM05D005586 ORTHO05D007044 1.3e-239 833.2 642 68.8
QL02p097708 Quercus lobata HOM05D005586 ORTHO05D007044 1.8e-239 832.8 651 70.0
GSVIVG01029208001 Vitis vinifera HOM05D005586 ORTHO05D007044 8.7e-239 830.5 631 71.8
Aa31LG3G13340 Aethionema arabicum HOM05D005586 ORTHO05D007044 3.1e-236 822.0 649 67.8
Phvul.003G146100 Phaseolus vulgaris HOM05D005586 ORTHO05D007044 3.1e-236 822.0 633 69.8
THA.LOC104811789 Tarenaya hassleriana HOM05D005586 ORTHO05D007044 3.4e-235 818.5 647 67.9
Thecc.09G173100 Theobroma cacao HOM05D005586 ORTHO05D007044 7.6e-235 817.4 627 69.5
VMungo1215G0758 Vigna mungo HOM05D005586 ORTHO05D007044 2.2e-234 815.8 618 71.0
EL10Ac8g18286 Beta vulgaris HOM05D005586 ORTHO05D007044 8.5e-234 813.9 648 67.7
MD13G1254800 Malus domestica HOM05D005586 ORTHO05D007044 8.5e-234 813.9 627 69.4
AL8G33420 Arabidopsis lyrata HOM05D005586 ORTHO05D007044 1.1e-233 813.5 653 67.2
BcaB01g04458 Brassica carinata HOM05D005586 ORTHO05D007044 1.9e-233 812.8 651 66.7
Sp6g19170 Schrenkiella parvula HOM05D005586 ORTHO05D007044 2.5e-233 812.4 651 66.8
BcaB08g36100 Brassica carinata HOM05D005586 ORTHO05D007044 2.7e-232 808.9 652 67.5
C03p14980 Brassica napus HOM05D005586 ORTHO05D007044 3.6e-232 808.5 654 66.7
CARHR271250 Cardamine hirsuta HOM05D005586 ORTHO05D007044 1.0e-231 807.0 660 65.6
Carub.0008s1797 Capsella rubella HOM05D005586 ORTHO05D007044 2.3e-231 805.8 655 66.3
AT5G57460 Arabidopsis thaliana HOM05D005586 ORTHO05D007044 3.0e-231 805.4 657 66.2
A03p12820 Brassica napus HOM05D005586 ORTHO05D007044 3.0e-231 805.4 652 66.6
BolC3t13940H Brassica oleracea HOM05D005586 ORTHO05D007044 5.1e-231 804.7 653 66.5
BraA03t10590Z Brassica rapa HOM05D005586 ORTHO05D007044 5.1e-231 804.7 651 66.5
BcaC01g06487 Brassica carinata HOM05D005586 ORTHO05D007044 1.9e-230 802.7 651 66.7
Thhalv10015707m.g Eutrema salsugineum HOM05D005586 ORTHO05D007044 4.3e-230 801.6 652 65.5
MBI03_g13495_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 5.7e-230 801.2 641 66.3
C09p49310 Brassica napus HOM05D005586 ORTHO05D007044 2.2e-229 799.3 653 66.3
BcaC04g19966 Brassica carinata HOM05D005586 ORTHO05D007044 4.8e-229 798.1 658 65.8
BraA10t43568Z Brassica rapa HOM05D005586 ORTHO05D007044 6.3e-229 797.7 651 66.8
A10p14890 Brassica napus HOM05D005586 ORTHO05D007044 1.1e-228 797.0 654 66.1
Aa31LG3G220 Aethionema arabicum HOM05D005586 ORTHO05D007044 5.0e-226 788.1 648 66.0
Actinidia15717 Actinidia chinensis HOM05D005586 ORTHO05D007044 3.3e-222 775.4 613 69.2
BolC9t57782H Brassica oleracea HOM05D005586 ORTHO05D007044 2.4e-220 769.2 653 64.8
TPR.G5407 Trifolium pratense HOM05D005586 ORTHO05D007044 2.2e-218 762.7 577 70.2
PSO541G5977 Papaver somniferum HOM05D005586 ORTHO05D007044 2.9e-218 762.3 651 63.6
AUR62021301 Chenopodium quinoa HOM05D005586 ORTHO05D007044 5.0e-218 761.5 643 64.9
AUR62033219 Chenopodium quinoa HOM05D005586 ORTHO05D007044 7.2e-217 757.7 643 64.5
CDE04G2484 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 2.1e-216 756.1 629 64.7
Gohir.D08G094100 Gossypium hirsutum HOM05D005586 ORTHO05D007044 2.7e-216 755.7 649 64.9
SHI41749 Sapria himalayana HOM05D005586 ORTHO05D007044 9.7e-214 747.3 647 62.1
MBI14_g17367_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 2.0e-211 739.6 636 62.3
SalBow6G0691 Salvia bowleyana HOM05D005586 ORTHO05D007044 2.6e-211 739.2 634 64.2
SalBow1G5715 Salvia bowleyana HOM05D005586 ORTHO05D007044 1.3e-210 736.9 635 64.4
Actinidia14649 Actinidia chinensis HOM05D005586 ORTHO05D007044 3.8e-210 735.3 528 73.9
ATR0618G120 Amborella trichopoda HOM05D005586 ORTHO05D007044 6.3e-205 718.0 633 61.1
MD13G1254300 Malus domestica HOM05D005586 ORTHO05D007044 4.7e-200 701.8 641 62.6
SEGI_38070 Sequoiadendron giganteum HOM05D005586 ORTHO05D007044 8.8e-199 697.6 636 58.8
Hma1.2p1_3184F.1_g333760 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 5.4e-196 688.3 626 62.5
MBI18_g04576_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 1.3e-189 667.2 631 59.9
Zm00001eb414690 Zea mays HOM05D005586 ORTHO05D007044 2.7e-187 659.4 640 56.6
Os08g0243900 Oryza sativa ssp. japonica HOM05D005586 ORTHO05D007044 1.1e-185 654.1 644 56.7
CDE02G2425 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 1.9e-164 583.6 640 53.3
BcaC01g06491 Brassica carinata HOM05D005586 ORTHO05D007044 5.4e-164 582.0 612 55.4
MBI16_g35931_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 2.1e-160 570.1 539 59.4
Mapoly0111s0055 Marchantia polymorpha HOM05D005586 ORTHO05D007044 1.4e-143 514.2 656 47.4
BcaC01g06494 Brassica carinata HOM05D005586 ORTHO05D007044 5.8e-142 508.8 614 51.1
Pp3c25_4850 Physcomitrium patens HOM05D005586 ORTHO05D007044 1.1e-140 504.6 655 45.2
AagrBONN_evm.TU.Sc2ySwM_368.670 Anthoceros agrestis HOM05D005586 ORTHO05D007044 7.4e-121 438.7 673 41.3
COL.COLO4_04392 Corchorus olitorius HOM05D005586 ORTHO05D007044 9.7e-113 411.8 350 63.4
unitig_899.g14852 Utricularia gibba HOM05D005586 ORTHO05D007044 4.2e-108 396.4 319 69.9
SMO228G0090 Selaginella moellendorffii HOM05D005586 ORTHO05D007044 5.0e-93 346.3 382 52.4
unitig_899.g14851 Utricularia gibba HOM05D005586 ORTHO05D007044 2.2e-88 330.9 243 67.9
HPP92_000781 Vanilla planifolia HOM05D005586 ORTHO05D007044 3.7e-64 250.4 315 48.6
CBR_g26159 Chara braunii HOM05D005586 ORTHO05D000002 1.5e-41 175.3 563 29.0
QL11p053068 Quercus lobata HOM05D005586 ORTHO05D007044 7.1e-39 166.4 118 77.1
MD16G1258000 Malus domestica HOM05D005586 ORTHO05D007044 6.6e-37 159.8 118 66.9
MD16G1258100 Malus domestica HOM05D005586 ORTHO05D007044 6.9e-18 96.7 116 50.9
Oeu013635.1 Olea europaea HOM05D006172 ORTHO05D005515 1.3e-16 92.4 88 56.8
CBR_g26157 Chara braunii HOM05D005586 ORTHO05D007044 5.1e-13 80.5 98 48.0
MBI16_g35933_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009834 4.1e-10 70.9 44 77.3
MBI16_g35934_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 5.5e-07 60.5 49 55.1
SalBow4G0612 Salvia bowleyana HOM05D005586 ORTHO05D360416 3.5e-06 57.8 46 58.7


User provided reference genes

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