Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 1.2e-123 446.4 219 100.0
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 1.3e-96 356.7 227 80.2
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 1.9e-95 352.8 225 82.2
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 7.4e-76 287.7 226 68.6
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 2.1e-75 286.2 244 64.3
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 2.2e-72 276.2 236 63.1
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 6.4e-72 274.6 226 65.9
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 6.4e-72 274.6 224 66.1
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 1.1e-71 273.9 224 66.1
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 1.9e-71 273.1 227 64.3
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 3.2e-71 272.3 230 63.5
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 3.2e-71 272.3 227 66.1
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 2.7e-70 269.2 220 66.8
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 2.7e-70 269.2 227 65.6
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 1.0e-69 267.3 211 67.3
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 1.3e-69 266.9 217 66.8
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 3.0e-69 265.8 228 64.0
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 5.1e-69 265.0 218 64.7
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 5.1e-69 265.0 211 66.8
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 1.1e-68 263.8 210 67.6
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 1.1e-68 263.8 224 65.2
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 2.5e-68 262.7 234 62.0
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 1.3e-67 260.4 221 62.4
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 1.6e-67 260.0 215 67.4
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 4.8e-67 258.5 233 62.2
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 4.8e-67 258.5 191 71.7
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 2.4e-66 256.1 231 61.0
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 2.4e-66 256.1 231 61.0
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 2.4e-66 256.1 227 62.6
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 6.9e-66 254.6 226 60.2
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 9.0e-66 254.2 231 61.0
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 1.2e-65 253.8 150 82.7
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 1.5e-65 253.4 231 61.0
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 2.6e-65 252.7 226 61.5
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 2.6e-65 252.7 229 62.0
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 4.5e-65 251.9 230 60.4
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 7.6e-65 251.1 225 62.2
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 1.3e-64 250.4 230 60.4
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 2.9e-64 249.2 226 60.2
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 3.8e-64 248.8 227 61.7
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 3.8e-64 248.8 152 80.9
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 1.4e-63 246.9 227 60.4
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 4.2e-63 245.4 156 78.8
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 7.1e-63 244.6 155 78.7
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 7.1e-63 244.6 154 79.2
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 1.2e-62 243.8 230 57.8
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 2.7e-62 242.7 198 65.2
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 2.7e-62 242.7 198 65.2
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 2.7e-62 242.7 198 65.2
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 2.7e-62 242.7 185 69.7
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 2.7e-62 242.7 228 59.6
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 2.7e-62 242.7 159 75.5
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 3.5e-62 242.3 166 76.5
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 3.5e-62 242.3 158 77.8
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 6.0e-62 241.5 231 60.2
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 1.0e-61 240.7 185 68.1
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 1.0e-61 240.7 158 77.2
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 1.8e-61 240.0 198 64.1
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 2.3e-61 239.6 227 59.5
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 5.1e-61 238.4 142 81.0
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 5.1e-61 238.4 155 73.5
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 8.7e-61 237.7 212 60.8
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 8.7e-61 237.7 189 66.7
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 1.1e-60 237.3 198 64.6
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 1.1e-60 237.3 198 64.6
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 1.1e-60 237.3 230 58.3
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 1.5e-60 236.9 198 63.1
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 1.9e-60 236.5 159 74.8
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 2.5e-60 236.1 150 76.7
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 2.5e-60 236.1 150 77.3
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 7.4e-60 234.6 153 76.5
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 7.4e-60 234.6 153 76.5
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 1.3e-59 233.8 165 70.3
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 1.3e-59 233.8 153 75.2
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 8.2e-59 231.1 129 85.3
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 1.1e-58 230.7 166 71.1
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 1.1e-58 230.7 156 74.4
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 1.1e-58 230.7 156 74.4
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 2.4e-58 229.6 140 77.1
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 2.9e-56 222.6 229 57.6
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 2.9e-56 222.6 126 83.3
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 8.5e-56 221.1 207 60.9
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 1.4e-55 220.3 150 74.7
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 2.5e-55 219.5 155 70.3
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 9.3e-55 217.6 201 60.7
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 3.6e-54 215.7 210 58.1
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 5.1e-53 211.8 202 59.9
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 7.4e-52 208.0 125 80.8
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 3.7e-51 205.7 151 66.9
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 3.7e-51 205.7 138 73.9
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 1.1e-50 204.1 146 69.2
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 4.1e-50 202.2 142 71.8
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 2.6e-49 199.5 207 56.0
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 3.4e-49 199.1 111 86.5
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 8.5e-48 194.5 161 61.5
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 1.4e-42 177.2 226 46.5
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 6.9e-42 174.9 162 61.7
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 8.2e-35 151.4 122 57.4
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 1.4e-34 150.6 147 57.8
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 1.5e-31 140.6 197 47.2
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 3.5e-25 119.4 99 63.6
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 2.5e-23 113.2 127 53.5
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 8.0e-22 108.2 56 89.3
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 2.6e-20 103.2 84 65.5
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 1.4e-18 97.4 58 77.6
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 2.7e-17 93.2 147 35.4
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 3.5e-17 92.8 67 70.1
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 3.6e-14 82.8 138 31.2
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 1.4e-10 70.9 45 77.8
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 1.2e-09 67.8 45 75.6
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 1.3e-08 64.3 101 33.7
MCO11G252 Micromonas commoda HOM05D061291 ORTHO05D034487 8.0e-06 55.1 142 32.4


User provided reference genes

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