Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 0.0e+00 1531.9 894 100.0
ECA247G1338 Erigeron canadensis HOM05D016619 ORTHO05D188089 4.9e-195 685.6 596 70.3
ECA234G1878 Erigeron canadensis HOM05D016619 ORTHO05D187094 8.8e-176 621.7 572 67.3
ECA234G3290 Erigeron canadensis HOM05D016619 ORTHO05D188604 6.5e-147 525.8 534 64.4
ECA232G2622 Erigeron canadensis HOM05D016619 ORTHO05D188920 1.1e-88 332.4 621 43.6
ECA232G4937 Erigeron canadensis HOM05D016619 ORTHO05D186636 3.6e-60 237.7 372 47.3
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 1.7e-46 192.2 141 74.5
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 5.2e-43 180.6 183 58.5
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 1.7e-41 175.6 182 57.1
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 2.4e-40 171.8 182 56.0
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 3.1e-40 171.4 182 56.0
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 3.1e-40 171.4 182 56.0
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 3.1e-40 171.4 182 56.0
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 3.1e-40 171.4 182 56.0
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 3.1e-40 171.4 182 56.0
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 3.1e-40 171.4 182 56.0
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 5.3e-40 170.6 192 53.6
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 7.0e-40 170.2 192 53.1
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 7.0e-40 170.2 182 54.9
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 9.1e-40 169.9 182 54.9
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 9.1e-40 169.9 182 54.9
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 1.2e-39 169.5 183 54.6
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 1.6e-39 169.1 182 54.9
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 1.6e-39 169.1 192 52.6
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 2.0e-39 168.7 192 52.6
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 2.0e-39 168.7 192 52.6
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 2.0e-39 168.7 192 52.6
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 2.0e-39 168.7 192 52.6
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 2.0e-39 168.7 192 52.6
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 2.0e-39 168.7 192 52.6
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 2.0e-39 168.7 192 52.6
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 2.0e-39 168.7 182 53.8
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 2.0e-39 168.7 182 54.9
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 2.7e-39 168.3 182 54.4
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 2.7e-39 168.3 182 53.8
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 2.7e-39 168.3 182 54.4
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 3.5e-39 167.9 182 53.8
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 3.5e-39 167.9 191 52.9
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 3.5e-39 167.9 182 53.8
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 3.5e-39 167.9 182 54.4
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 3.5e-39 167.9 182 54.9
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 4.5e-39 167.5 192 52.1
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 4.5e-39 167.5 192 52.1
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 4.5e-39 167.5 184 53.8
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 5.9e-39 167.2 182 54.4
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 5.9e-39 167.2 182 54.9
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 5.9e-39 167.2 182 53.8
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 7.7e-39 166.8 183 55.2
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 7.7e-39 166.8 182 54.9
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 7.7e-39 166.8 182 54.9
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 7.7e-39 166.8 182 54.9
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 7.7e-39 166.8 183 54.1
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 1.0e-38 166.4 182 53.3
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 1.0e-38 166.4 192 52.1
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 1.0e-38 166.4 182 54.4
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 1.3e-38 166.0 182 54.4
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 1.3e-38 166.0 182 54.4
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 1.3e-38 166.0 182 54.4
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 1.7e-38 165.6 182 54.4
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 2.2e-38 165.2 182 53.3
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 2.2e-38 165.2 184 53.3
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 2.2e-38 165.2 182 53.8
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 2.9e-38 164.9 182 53.8
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 2.9e-38 164.9 182 53.3
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 2.9e-38 164.9 182 53.8
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 2.9e-38 164.9 182 52.7
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 3.8e-38 164.5 183 52.5
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 3.8e-38 164.5 182 52.7
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 5.0e-38 164.1 182 53.3
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 5.0e-38 164.1 182 54.4
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 6.5e-38 163.7 182 53.8
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 6.5e-38 163.7 182 53.8
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 8.5e-38 163.3 183 51.9
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 8.5e-38 163.3 183 51.9
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 8.5e-38 163.3 182 53.8
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 8.5e-38 163.3 182 53.8
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 1.1e-37 162.9 183 50.8
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 1.1e-37 162.9 183 50.8
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 1.1e-37 162.9 183 50.8
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 1.1e-37 162.9 181 53.0
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 1.1e-37 162.9 182 52.7
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 1.5e-37 162.5 182 52.7
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 1.5e-37 162.5 182 52.2
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 1.9e-37 162.2 182 52.7
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 1.9e-37 162.2 182 51.1
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 1.9e-37 162.2 182 52.7
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 2.5e-37 161.8 183 52.5
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 3.2e-37 161.4 182 52.2
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 3.2e-37 161.4 182 50.5
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 3.2e-37 161.4 182 52.7
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 4.2e-37 161.0 182 53.3
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 5.5e-37 160.6 182 52.2
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 5.5e-37 160.6 182 52.2
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 5.5e-37 160.6 182 52.2
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 5.5e-37 160.6 182 53.3
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 7.2e-37 160.2 182 51.6
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 7.2e-37 160.2 182 52.2
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 1.2e-36 159.5 182 51.1
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.2e-36 159.5 182 52.2
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 1.6e-36 159.1 182 52.7
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 2.1e-36 158.7 182 50.0
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 2.1e-36 158.7 182 51.6
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 2.7e-36 158.3 182 53.3
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 2.7e-36 158.3 183 51.9
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 2.7e-36 158.3 182 52.2
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 3.6e-36 157.9 182 51.1
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 4.7e-36 157.5 135 64.4
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.0e-35 154.8 183 50.8
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 4.0e-35 154.5 174 54.6
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 8.3e-33 146.7 182 49.5
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 1.1e-32 146.4 185 47.6
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 9.1e-32 143.3 182 46.2
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 7.7e-31 140.2 96 75.0
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 1.7e-30 139.0 182 47.3
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 5.0e-30 137.5 182 46.2
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 7.2e-29 133.7 132 54.5
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 4.7e-28 131.0 183 44.8
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 2.3e-27 128.6 202 42.6
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 3.0e-27 128.3 96 67.7
ECA232G1383 Erigeron canadensis HOM05D008258 ORTHO05D003386 5.2e-27 127.5 112 61.6
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 3.1e-24 118.2 83 71.1
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 7.8e-23 113.6 78 76.9
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 1.0e-22 113.2 195 38.5
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 4.7e-20 104.4 72 76.4
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 5.8e-18 97.4 76 68.4
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 2.2e-17 95.5 99 57.6
ECA232G1380 Erigeron canadensis HOM05D016619 ORTHO05D188666 1.3e-14 86.3 68 63.2
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 3.7e-09 68.2 96 43.8
ECA234G3751 Erigeron canadensis HOM05D016619 ORTHO05D187336 7.0e-08 63.9 32 93.8


User provided reference genes

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