Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 1.1e-136 490.0 252 100.0
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 3.5e-53 212.6 173 67.6
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 1.2e-45 187.6 176 61.9
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 3.5e-45 186.0 172 61.0
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 4.0e-25 119.4 164 48.2
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 4.4e-24 115.9 174 43.1
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 7.5e-24 115.2 175 43.4
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 3.7e-23 112.8 129 50.4
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 1.6e-21 107.5 149 45.0
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 6.0e-21 105.5 170 42.4
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 6.0e-21 105.5 170 42.4
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 1.0e-20 104.8 150 46.0
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 1.3e-20 104.4 153 43.8
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 2.3e-20 103.6 151 42.4
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 3.0e-20 103.2 158 43.0
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 3.9e-20 102.8 153 41.2
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 8.6e-20 101.7 152 43.4
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 8.6e-20 101.7 162 42.6
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 1.1e-19 101.3 158 40.5
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 1.9e-19 100.5 199 35.2
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 5.6e-19 99.0 138 44.2
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 7.3e-19 98.6 150 44.0
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 9.5e-19 98.2 183 39.3
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 2.1e-18 97.1 173 40.5
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 2.1e-18 97.1 164 40.2
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 2.1e-18 97.1 162 43.8
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 2.1e-18 97.1 173 37.6
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 2.1e-18 97.1 148 44.6
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 3.6e-18 96.3 147 39.5
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 4.7e-18 95.9 179 38.0
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 6.2e-18 95.5 164 40.2
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 6.2e-18 95.5 163 41.1
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 1.4e-17 94.4 171 38.6
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 1.8e-17 94.0 129 45.7
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 1.8e-17 94.0 156 41.0
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 1.8e-17 94.0 150 46.0
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 1.8e-17 94.0 164 37.8
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 2.3e-17 93.6 149 43.6
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 2.3e-17 93.6 149 43.6
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 2.3e-17 93.6 140 43.6
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 4.0e-17 92.8 147 40.1
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 5.2e-17 92.4 129 45.7
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 6.8e-17 92.0 163 39.3
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 8.9e-17 91.7 152 37.5
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 1.2e-16 91.3 145 42.8
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 3.4e-16 89.7 157 39.5
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 3.4e-16 89.7 135 42.2
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 3.4e-16 89.7 164 39.0
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 3.4e-16 89.7 140 44.3
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 5.8e-16 89.0 155 41.3
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 7.5e-16 88.6 144 40.3
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 1.3e-15 87.8 138 41.3
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 1.3e-15 87.8 130 45.4
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 1.3e-15 87.8 123 45.5
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 2.2e-15 87.0 142 40.1
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 2.2e-15 87.0 126 43.7
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 2.2e-15 87.0 172 38.4
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 2.2e-15 87.0 131 42.7
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 2.2e-15 87.0 166 38.0
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 6.4e-15 85.5 144 38.2
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 6.4e-15 85.5 137 42.3
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 6.4e-15 85.5 120 45.8
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 8.3e-15 85.1 64 65.6
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 8.3e-15 85.1 134 41.8
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 3.2e-14 83.2 142 39.4
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 5.4e-14 82.4 142 39.4
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 7.1e-14 82.0 147 39.5
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 9.2e-14 81.6 149 32.9
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 9.2e-14 81.6 137 40.1
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 9.2e-14 81.6 172 34.3
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 1.2e-13 81.3 142 38.7
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 2.7e-13 80.1 178 34.3
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 3.5e-13 79.7 107 43.0
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 3.5e-13 79.7 107 43.0
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 3.5e-13 79.7 141 37.6
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 4.6e-13 79.3 145 39.3
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 6.0e-13 79.0 115 44.3
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 7.8e-13 78.6 115 44.3
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 7.8e-13 78.6 115 44.3
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 1.7e-12 77.4 118 44.9
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 2.3e-12 77.0 169 34.3
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 2.3e-12 77.0 129 38.8
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 3.9e-12 76.3 171 31.6
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 6.6e-12 75.5 130 40.0
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 6.6e-12 75.5 152 36.8
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 2.5e-11 73.6 153 35.9
ECA234G4526 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.3e-11 72.8 56 62.5
ECA238G1199 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.3e-11 72.8 58 55.2
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 4.3e-11 72.8 183 31.1
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 7.3e-11 72.0 62 56.5
ECA233G5641 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.2e-10 71.2 54 57.4
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 1.2e-10 71.2 57 54.4
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.6e-10 70.9 65 53.8
ECA238G1019 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.1e-10 70.5 51 60.8
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 2.8e-10 70.1 139 36.7
ECA233G5653 Erigeron canadensis HOM05D003614 ORTHO05D004156 2.8e-10 70.1 54 59.3
ECA234G2889 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.2e-10 68.9 55 50.9
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 8.1e-10 68.6 169 32.0
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 8.1e-10 68.6 149 37.6
ECA232G3889 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.1e-09 68.2 70 45.7
ECA238G0892 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.1e-09 68.2 57 49.1
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 1.4e-09 67.8 155 34.2
ECA246G0534 Erigeron canadensis HOM05D001165 ORTHO05D001347 1.4e-09 67.8 60 51.7
ECA238G3342 Erigeron canadensis HOM05D000062 ORTHO05D000043 1.8e-09 67.4 58 50.0
ECA240G3367 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.3e-09 67.0 58 50.0
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 5.2e-09 65.9 144 34.0
ECA246G1196 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.5e-08 64.3 72 41.7
ECA247G0998 Erigeron canadensis HOM05D000036 ORTHO05D000095 2.0e-08 63.9 54 48.1
ECA232G3261 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.6e-08 63.5 50 54.0
ECA238G4117 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.6e-08 63.5 49 55.1
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 4.4e-08 62.8 165 31.5
ECA234G0628 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.8e-08 62.4 63 44.4
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 7.6e-08 62.0 62 48.4
ECA246G4476 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.6e-08 62.0 57 42.1
ECA248G2000 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.9e-08 61.6 50 54.0
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 9.9e-08 61.6 57 43.9
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 1.3e-07 61.2 57 42.1
ECA233G5321 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.3e-07 61.2 72 41.7
ECA232G4385 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.2e-07 60.5 58 46.6
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 2.2e-07 60.5 62 50.0
ECA234G4387 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.9e-07 60.1 54 44.4
HanXRQChr07g0202241 Helianthus annuus HOM05D000003 ORTHO05D000004 2.9e-07 60.1 73 37.0
ECA232G3929 Erigeron canadensis HOM05D000968 ORTHO05D003096 3.7e-07 59.7 46 52.2
ECA233G3200 Erigeron canadensis HOM05D000811 ORTHO05D001558 3.7e-07 59.7 58 41.4
ECA248G1774 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.7e-07 59.7 66 39.4
ECA246G3491 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.9e-07 59.3 58 43.1
ECA246G4036 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.9e-07 59.3 94 35.1
ECA247G1191 Erigeron canadensis HOM05D002397 ORTHO05D000004 4.9e-07 59.3 54 44.4
AT4G00140 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 6.4e-07 58.9 94 42.6
ECA238G0564 Erigeron canadensis HOM05D002668 ORTHO05D003295 6.4e-07 58.9 58 43.1
ECA247G3751 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.1e-06 58.2 55 43.6
SMO137G0209 Selaginella moellendorffii HOM05D007090 ORTHO05D008993 1.1e-06 58.2 133 31.6
ECA232G0524 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.9e-06 57.4 54 44.4
ECA232G1152 Erigeron canadensis HOM05D000575 ORTHO05D003041 1.9e-06 57.4 71 39.4
ECA233G6064 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.9e-06 57.4 58 39.7
ECA238G4228 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.9e-06 57.4 49 46.9
ECA240G1637 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.4e-06 57.0 58 39.7
ECA248G2861 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.4e-06 57.0 82 36.6
ECA236G0698 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.2e-06 56.6 61 39.3
ECA240G3401 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.2e-06 56.6 72 36.1
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 3.2e-06 56.6 61 36.1
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 4.1e-06 56.2 44 56.8
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 4.1e-06 56.2 159 28.9
ECA234G2508 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.4e-06 55.8 58 37.9
HanXRQChr14g0451141 Helianthus annuus HOM05D000003 ORTHO05D000004 5.4e-06 55.8 62 38.7
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 7.1e-06 55.5 144 30.6
ECA234G0916 Erigeron canadensis HOM05D000312 ORTHO05D000221 7.1e-06 55.5 52 36.5
ECA236G5046 Erigeron canadensis HOM05D000003 ORTHO05D000004 7.1e-06 55.5 58 37.9
HanXRQChr09g0254861 Helianthus annuus HOM05D000003 ORTHO05D000004 7.1e-06 55.5 72 27.8
HanXRQChr09g0261431 Helianthus annuus HOM05D000003 ORTHO05D000004 7.1e-06 55.5 71 38.0
ECA236G0696 Erigeron canadensis HOM05D000003 ORTHO05D000004 9.2e-06 55.1 58 39.7


User provided reference genes

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