Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 0.0e+00 1449.9 777 100.0
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 4.4e-309 1064.3 796 73.2
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 2.7e-306 1055.0 780 72.8
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 6.9e-294 1013.8 778 72.1
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 1.3e-207 727.2 840 51.2
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 1.0e-204 717.6 833 49.9
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 8.9e-201 704.5 816 50.2
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.6e-197 693.7 843 50.1
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 4.3e-195 685.6 832 49.5
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 2.4e-193 679.9 839 48.3
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 3.1e-193 679.5 844 47.7
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 6.9e-193 678.3 831 49.1
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 2.0e-192 676.8 839 47.4
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 2.2e-191 673.3 852 47.4
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 6.4e-191 671.8 840 47.4
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 6.4e-191 671.8 842 48.6
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 8.4e-191 671.4 838 47.0
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.1e-190 671.0 840 48.3
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 1.1e-190 671.0 831 48.7
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 1.4e-190 670.6 843 48.3
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 1.9e-190 670.2 715 53.3
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.9e-190 670.2 838 47.5
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 4.2e-190 669.1 831 46.9
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 5.4e-190 668.7 831 48.6
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 9.3e-190 667.9 844 47.2
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 1.2e-189 667.5 830 47.2
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 3.5e-189 666.0 828 47.3
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.3e-188 664.1 842 48.1
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 5.1e-188 662.1 841 47.8
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 1.5e-187 660.6 845 46.5
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 1.9e-187 660.2 852 46.8
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 3.3e-187 659.4 838 47.6
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 5.6e-187 658.7 849 47.6
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 7.3e-187 658.3 839 45.4
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 5.3e-185 652.1 844 46.7
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 6.9e-185 651.7 827 48.1
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.6e-184 649.8 839 45.8
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 2.6e-184 649.8 844 47.4
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 9.9e-184 647.9 833 47.5
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 1.1e-182 644.4 838 47.4
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.9e-182 643.7 839 46.5
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 3.2e-182 642.9 826 48.4
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 5.4e-182 642.1 833 47.3
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 7.1e-182 641.7 820 47.2
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 7.1e-182 641.7 820 48.0
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 9.3e-182 641.3 822 47.7
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.6e-181 640.6 748 50.8
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 4.6e-181 639.0 881 45.4
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 1.0e-180 637.9 841 45.8
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 1.0e-180 637.9 834 47.4
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 1.0e-180 637.9 828 48.2
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 2.3e-180 636.7 829 46.7
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 4.3e-179 632.5 820 46.2
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 4.8e-178 629.0 843 45.1
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 5.3e-177 625.5 839 45.8
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 1.5e-176 624.0 842 45.8
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.0e-176 623.6 816 48.2
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 2.6e-176 623.2 835 45.5
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 3.4e-176 622.9 843 46.9
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 4.5e-176 622.5 839 45.6
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 1.3e-175 620.9 802 47.0
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 2.9e-175 619.8 801 48.2
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.9e-175 619.8 842 44.3
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 4.9e-175 619.0 833 45.0
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 6.5e-175 618.6 695 53.4
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 6.5e-175 618.6 840 45.2
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 1.2e-173 614.4 845 45.6
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 2.7e-173 613.2 747 49.0
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 3.5e-173 612.8 816 46.0
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 3.5e-173 612.8 834 45.8
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 1.3e-172 610.9 968 42.1
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 1.8e-172 610.5 833 44.7
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 5.1e-172 609.0 828 44.7
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 8.7e-172 608.2 841 44.4
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 1.1e-171 607.8 826 46.4
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.1e-171 607.8 840 45.0
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 4.3e-171 605.9 808 47.3
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 5.7e-171 605.5 795 48.2
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 7.4e-171 605.1 843 44.2
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 9.6e-171 604.7 833 44.5
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 1.6e-170 604.0 838 45.0
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 8.2e-170 601.7 811 45.1
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 1.1e-169 601.3 832 44.1
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 1.1e-166 591.3 834 45.2
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 1.9e-166 590.5 829 44.9
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 2.5e-166 590.1 944 40.9
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 1.6e-165 587.4 815 44.8
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 6.7e-164 582.0 830 44.0
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 2.5e-163 580.1 873 41.9
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 4.3e-163 579.3 834 44.0
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 5.7e-163 578.9 676 51.2
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 7.4e-163 578.6 825 43.9
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 9.7e-163 578.2 862 44.1
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 2.8e-162 576.6 817 44.2
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 8.2e-162 575.1 801 45.9
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 5.3e-161 572.4 831 43.7
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 7.7e-160 568.5 826 42.9
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 1.3e-159 567.8 826 42.9
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.3e-159 567.8 826 42.9
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 1.7e-159 567.4 823 42.8
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 3.8e-159 566.2 825 43.9
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 6.5e-159 565.5 795 44.2
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.1e-158 564.7 641 52.9
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 2.5e-158 563.5 650 50.2
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 3.2e-158 563.1 826 42.6
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.8e-156 557.4 639 51.8
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 8.8e-156 555.1 824 44.1
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 1.1e-155 554.7 823 42.4
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 2.0e-155 553.9 784 43.2
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 3.3e-155 553.1 787 43.6
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 1.7e-154 550.8 789 43.1
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 8.2e-154 548.5 788 43.1
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 1.4e-153 547.7 795 43.0
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 4.1e-153 546.2 775 43.1
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 1.5e-152 544.3 790 41.8
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 1.3e-151 541.2 783 43.4
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 3.8e-151 539.7 789 42.7
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 8.5e-151 538.5 809 42.8
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 1.6e-149 534.3 639 50.2
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 2.0e-147 527.3 785 42.0
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.0e-143 515.0 644 48.1
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 6.5e-143 512.3 617 50.1
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 4.2e-142 509.6 728 44.8
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 9.4e-142 508.4 621 50.1
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 3.3e-139 500.0 843 40.1
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.7e-138 497.7 749 42.5
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 4.1e-137 493.0 652 46.0
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 9.1e-137 491.9 782 40.2
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 3.2e-134 483.4 681 45.8
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.2e-130 470.7 844 37.8
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 6.5e-127 459.1 817 39.5
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 4.0e-124 449.9 836 37.2
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.4e-123 446.8 876 35.4
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 3.7e-122 443.4 819 37.5
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 3.5e-120 436.8 818 37.5
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 1.8e-113 414.5 789 37.9
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 5.8e-107 392.9 866 35.3
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 3.3e-102 377.1 710 40.1
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.2e-101 375.2 532 43.4
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 1.2e-99 368.6 568 42.1
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 4.9e-98 363.2 524 43.9
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 2.8e-93 347.4 779 34.7
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 3.4e-91 340.5 459 44.4
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 2.1e-88 331.3 663 37.4
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.3e-87 328.6 803 30.8
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 8.9e-84 315.8 806 31.3
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 8.4e-82 309.3 728 32.4
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.9e-78 298.1 416 44.2
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 2.1e-77 294.7 755 35.0
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.8e-55 221.9 434 37.8
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 6.3e-53 213.4 670 27.8
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.8e-39 168.7 267 43.4
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 3.9e-39 167.5 331 39.3
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.5e-35 155.6 113 61.9
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 2.9e-34 151.4 193 44.0
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.1e-32 145.2 155 47.7
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.7e-26 125.6 293 31.7
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 2.2e-26 125.2 307 34.2
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 2.0e-22 112.1 251 34.3
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 2.6e-22 111.7 182 38.5
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.3e-21 109.4 223 33.6
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 1.1e-20 106.3 113 49.6
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 3.1e-20 104.8 175 37.1
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.0e-18 99.8 117 45.3
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 2.7e-16 91.7 193 31.6
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.0e-14 85.5 119 40.3
MBI13_g36805_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.3e-13 82.8 143 42.7
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.4e-12 78.6 115 43.5
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 5.4e-12 77.4 71 52.1
HPP92_000472 Vanilla planifolia HOM05D003622 ORTHO05D004453 3.8e-10 71.2 155 38.1
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 5.0e-10 70.9 48 64.6
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 5.5e-09 67.4 116 38.8
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.1e-08 65.5 173 29.5
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 4.0e-07 61.2 146 32.2


User provided reference genes

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