Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G4028 Erigeron canadensis HOM05D004041 ORTHO05D004564 2.2e-303 1045.4 789 100.0
HanXRQChr10g0299041 Helianthus annuus HOM05D004041 ORTHO05D004564 1.1e-76 292.4 418 55.5
Lsat_1_v5_gn_4_74560 Lactuca sativa HOM05D004041 ORTHO05D004564 9.4e-65 252.7 208 70.7
Lj8C419G2 Lonicera japonica HOM05D004041 ORTHO05D004564 7.5e-46 189.9 170 64.7
FvH4_2g30620 Fragaria vesca HOM05D004041 ORTHO05D004564 4.1e-44 184.1 149 64.4
FAN24G0669 Fragaria x ananassa HOM05D004041 ORTHO05D004564 4.1e-44 184.1 149 64.4
Prupe.1G463200 Prunus persica HOM05D004041 ORTHO05D004564 7.0e-44 183.3 187 57.8
TWI15G0012 Tripterygium wilfordii HOM05D004041 ORTHO05D004564 6.0e-43 180.3 226 52.7
Glyma.17G200600 Glycine max HOM05D004041 ORTHO05D004564 1.0e-42 179.5 150 66.7
GSVIVG01035595001 Vitis vinifera HOM05D004041 ORTHO05D004564 1.0e-42 179.5 207 55.1
RcHm_v2.0_Chr6g0312381 Rosa chinensis HOM05D004041 ORTHO05D004564 1.3e-42 179.1 150 64.7
FAN20G2913 Fragaria x ananassa HOM05D004041 ORTHO05D004564 3.9e-42 177.6 201 53.2
Actinidia12476 Actinidia chinensis HOM05D004041 ORTHO05D004564 5.0e-42 177.2 220 50.5
Manes.03G046500 Manihot esculenta HOM05D004041 ORTHO05D004564 6.6e-42 176.8 161 60.9
arahy.Tifrunner.gnm1.ann1.1H4CIU Arachis hypogaea HOM05D004041 ORTHO05D004564 1.1e-41 176.0 215 52.1
PGR119G2538 Punica granatum HOM05D004041 ORTHO05D004564 1.5e-41 175.6 146 65.1
Sabra06G0181500 Salix brachista HOM05D004041 ORTHO05D004564 1.5e-41 175.6 169 60.9
FAN15G2764 Fragaria x ananassa HOM05D004041 ORTHO05D004564 2.5e-41 174.9 201 52.7
FAN27G0182 Fragaria x ananassa HOM05D004041 ORTHO05D004564 2.5e-41 174.9 201 52.7
Lj1g0018267 Lotus japonicus HOM05D004041 ORTHO05D004564 2.5e-41 174.9 227 50.2
Phvul.001G088700 Phaseolus vulgaris HOM05D004041 ORTHO05D004564 3.3e-41 174.5 150 63.3
Potri.006G233000 Populus trichocarpa HOM05D004041 ORTHO05D004564 7.3e-41 173.3 169 60.4
DCAR_004521 Daucus carota HOM05D004041 ORTHO05D004564 9.5e-41 172.9 207 52.2
Aqoxy7G02570 Aquilegia oxysepala HOM05D004041 ORTHO05D004564 1.6e-40 172.2 149 61.7
TWI60G0712 Tripterygium wilfordii HOM05D004041 ORTHO05D004564 1.6e-40 172.2 169 56.8
Glyma.14G131900 Glycine max HOM05D004041 ORTHO05D004564 2.8e-40 171.4 214 50.9
Nitab4.5_0000288g0130 Nicotiana tabacum HOM05D004041 ORTHO05D004564 2.8e-40 171.4 212 53.3
TAR383G1094 Trochodendron aralioides HOM05D004041 ORTHO05D004564 3.6e-40 171.0 250 44.8
Nitab4.5_0008752g0030 Nicotiana tabacum HOM05D004041 ORTHO05D004564 6.2e-40 170.2 201 53.7
MD15G1111100 Malus domestica HOM05D004041 ORTHO05D004564 8.0e-40 169.9 186 55.4
Lalb_Chr11g0064071 Lupinus albus HOM05D004041 ORTHO05D004564 1.8e-39 168.7 185 53.5
Phvul.006G038688 Phaseolus vulgaris HOM05D004041 ORTHO05D004564 2.3e-39 168.3 205 52.2
CSS0017741 Camellia sinensis var. sinensis HOM05D004041 ORTHO05D004564 3.1e-39 167.9 211 52.1
Eucgr.H02470 Eucalyptus grandis HOM05D004041 ORTHO05D004564 3.1e-39 167.9 220 48.2
VMungo1383G3608 Vigna mungo HOM05D004041 ORTHO05D004564 6.8e-39 166.8 219 49.8
Atru.chr4.1391 Acer truncatum HOM05D004041 ORTHO05D004564 8.9e-39 166.4 212 50.5
EL10Ac2g03659 Beta vulgaris HOM05D004041 ORTHO05D004564 8.9e-39 166.4 206 49.0
Hund03240 Selenicereus undatus HOM05D004041 ORTHO05D004564 8.9e-39 166.4 212 49.5
Sc06g0000040 Simmondsia chinensis HOM05D004041 ORTHO05D004564 1.2e-38 166.0 210 50.0
Sc06g0001360 Simmondsia chinensis HOM05D004041 ORTHO05D004564 1.2e-38 166.0 210 50.0
Ca_12887_v3 Cicer arietinum L. HOM05D004041 ORTHO05D004564 1.5e-38 165.6 219 51.1
MD08G1133100 Malus domestica HOM05D004041 ORTHO05D004564 2.0e-38 165.2 186 52.7
Peaxi162Scf00213g01515 Petunia axillaris HOM05D004041 ORTHO05D004564 2.6e-38 164.9 201 52.2
Aa31LG4G18100 Aethionema arabicum HOM05D004041 ORTHO05D004564 3.4e-38 164.5 169 55.0
COL.COLO4_09287 Corchorus olitorius HOM05D004041 ORTHO05D004564 3.4e-38 164.5 215 47.0
Migut.E01401 Erythranthe guttata HOM05D004041 ORTHO05D004564 4.4e-38 164.1 203 51.7
Psat6g031640 Pisum sativum HOM05D004041 ORTHO05D004564 4.4e-38 164.1 175 56.6
Thecc.10G127600 Theobroma cacao HOM05D004041 ORTHO05D004564 5.8e-38 163.7 212 50.5
Sed0021561 Sechium edule HOM05D004041 ORTHO05D004564 7.5e-38 163.3 213 46.9
CsaV3_2G031560 Cucumis sativus L. HOM05D004041 ORTHO05D004564 1.3e-37 162.5 204 49.0
CARHR158630 Cardamine hirsuta HOM05D004041 ORTHO05D004564 1.7e-37 162.2 223 47.1
THA.LOC104799001 Tarenaya hassleriana HOM05D004041 ORTHO05D004564 2.9e-37 161.4 178 53.9
Lalb_Chr23g0268921 Lupinus albus HOM05D004041 ORTHO05D004564 8.3e-37 159.8 204 50.5
Ciclev10007432m.g Citrus clementina HOM05D004041 ORTHO05D004564 1.1e-36 159.5 203 52.7
PSO541G4756 Papaver somniferum HOM05D004041 ORTHO05D004564 1.1e-36 159.5 192 52.1
CiPaw.07G050600 Carya illinoinensis HOM05D004041 ORTHO05D004564 1.4e-36 159.1 218 49.1
Duzib128G1534 Durio zibethinus HOM05D004041 ORTHO05D004564 1.9e-36 158.7 219 48.4
PSO210G2134 Papaver somniferum HOM05D004041 ORTHO05D004564 1.9e-36 158.7 148 58.8
Cc03_g09420 Coffea canephora HOM05D004041 ORTHO05D004564 2.4e-36 158.3 216 50.9
MBI11_g09070_MAGBIO Magnolia biondii HOM05D004041 ORTHO05D004564 2.4e-36 158.3 200 49.0
QL12p024601 Quercus lobata HOM05D004041 ORTHO05D004564 2.4e-36 158.3 215 48.8
SalBow8G3032 Salvia bowleyana HOM05D004041 ORTHO05D004564 2.4e-36 158.3 199 50.3
Ah.10g033610 Amaranthus hybridus HOM05D004041 ORTHO05D004564 4.1e-36 157.5 209 46.9
ClCG08G012810 Citrullus lanatus HOM05D004041 ORTHO05D004564 4.1e-36 157.5 203 48.8
Sopen08g023080 Solanum pennellii HOM05D004041 ORTHO05D004564 4.1e-36 157.5 182 54.4
AL5G29450 Arabidopsis lyrata HOM05D004041 ORTHO05D004564 5.4e-36 157.1 201 50.2
CiPaw.07G215400 Carya illinoinensis HOM05D004041 ORTHO05D004564 9.2e-36 156.4 206 49.0
AUR62020692 Chenopodium quinoa HOM05D004041 ORTHO05D004564 9.2e-36 156.4 205 46.3
AUR62028033 Chenopodium quinoa HOM05D004041 ORTHO05D004564 2.1e-35 155.2 205 44.9
Thhalv10010217m.g Eutrema salsugineum HOM05D004041 ORTHO05D004564 2.1e-35 155.2 219 45.7
Sp5g12500 Schrenkiella parvula HOM05D004041 ORTHO05D004564 2.7e-35 154.8 168 52.4
Solyc08g074440.4 Solanum lycopersicum HOM05D004041 ORTHO05D004564 4.6e-35 154.1 200 50.5
Zm00001eb344480 Zea mays HOM05D004041 ORTHO05D004564 4.6e-35 154.1 212 45.3
Duzib106G1246 Durio zibethinus HOM05D004041 ORTHO05D004564 1.0e-34 152.9 209 49.8
Gorai.010G210300 Gossypium raimondii HOM05D004041 ORTHO05D004564 1.0e-34 152.9 210 49.5
Lj8C415T2 Lonicera japonica HOM05D004041 ORTHO05D004564 1.3e-34 152.5 116 69.8
PGSC0003DMG401029567 Solanum tuberosum HOM05D004041 ORTHO05D004564 1.3e-34 152.5 189 52.9
A06p18110 Brassica napus HOM05D004041 ORTHO05D004564 1.7e-34 152.1 163 53.4
BraA06t24900Z Brassica rapa HOM05D004041 ORTHO05D004564 1.7e-34 152.1 163 53.4
CAN.G195.14 Capsicum annuum HOM05D004041 ORTHO05D004564 1.7e-34 152.1 174 55.7
CDE07G1163 Ceratophyllum demersum HOM05D004041 ORTHO05D004564 1.7e-34 152.1 205 47.3
Gohir.D06G179700 Gossypium hirsutum HOM05D004041 ORTHO05D004564 1.7e-34 152.1 210 49.0
Thecc.10G128100 Theobroma cacao HOM05D004041 ORTHO05D004564 1.7e-34 152.1 147 59.2
BcaC07g39425 Brassica carinata HOM05D004041 ORTHO05D004564 2.3e-34 151.8 216 45.8
Thecc.10G128300 Theobroma cacao HOM05D004041 ORTHO05D004564 2.3e-34 151.8 147 59.2
C08p24610 Brassica napus HOM05D004041 ORTHO05D004564 3.0e-34 151.4 215 46.0
BolC8t50077H Brassica oleracea HOM05D004041 ORTHO05D004564 3.0e-34 151.4 215 46.0
Gohir.A06G171600 Gossypium hirsutum HOM05D004041 ORTHO05D004564 6.6e-34 150.2 210 48.6
AT3G49601 Arabidopsis thaliana HOM05D004041 ORTHO05D004564 1.5e-33 149.1 208 45.2
PSO832G4585 Papaver somniferum HOM05D004041 ORTHO05D004564 1.5e-33 149.1 144 56.2
BcaB01g00690 Brassica carinata HOM05D004041 ORTHO05D004564 2.5e-33 148.3 200 46.0
Mapoly0057s0059 Marchantia polymorpha HOM05D004041 ORTHO05D004564 5.6e-33 147.1 153 53.6
Cpa.g.sc117.15 Carica papaya HOM05D004041 ORTHO05D004564 9.5e-33 146.4 120 64.2
Nitab4.5_0000648g0040 Nicotiana tabacum HOM05D004041 ORTHO05D004564 9.5e-33 146.4 197 49.2
Glyma.11G174282 Glycine max HOM05D004041 ORTHO05D004564 1.2e-32 146.0 128 60.9
Gohir.D06G179400 Gossypium hirsutum HOM05D004041 ORTHO05D004564 2.1e-32 145.2 148 56.1
Nn5g27656 Nelumbo nucifera HOM05D004041 ORTHO05D004564 1.1e-31 142.9 114 68.4
SEGI_30814 Sequoiadendron giganteum HOM05D004041 ORTHO05D004564 1.4e-31 142.5 144 54.2
Gorai.010G210000 Gossypium raimondii HOM05D004041 ORTHO05D004564 2.3e-31 141.7 148 55.4
SGA_v2.0_scaffold121G33039 Striga asiatica HOM05D003985 ORTHO05D005253 5.2e-31 140.6 205 46.8
ATR0665G601 Amborella trichopoda HOM05D004041 ORTHO05D004564 6.8e-31 140.2 213 42.7
vmacro00640 Vaccinium macrocarpon HOM05D004041 ORTHO05D004564 6.8e-31 140.2 115 63.5
Pp3c3_10000 Physcomitrium patens HOM05D004041 ORTHO05D004564 8.9e-31 139.8 173 49.1
CBR_g88579 Chara braunii HOM05D004041 ORTHO05D004564 1.5e-30 139.0 144 52.1
THA.LOC109116738 Tarenaya hassleriana HOM05D004041 ORTHO05D004564 2.0e-30 138.7 136 57.4
TPR.G10377 Trifolium pratense HOM05D004041 ORTHO05D004564 2.0e-30 138.7 107 68.2
Medtr1g010100 Medicago truncatula HOM05D004041 ORTHO05D004564 9.9e-30 136.3 106 67.9
Oeu026036.1 Olea europaea HOM05D004041 ORTHO05D004564 9.9e-30 136.3 115 61.7
TPR.G20436 Trifolium pratense HOM05D004041 ORTHO05D004564 2.9e-29 134.8 106 67.0
AagrBONN_evm.TU.Sc2ySwM_344.5195 Anthoceros agrestis HOM05D004041 ORTHO05D004564 3.7e-29 134.4 189 44.4
CSS0020148 Camellia sinensis var. sinensis HOM05D004041 ORTHO05D004564 8.3e-29 133.3 104 66.3
Zm00001eb204710 Zea mays HOM05D004041 ORTHO05D004564 1.3e-26 125.9 223 40.8
BcaC09g49964 Brassica carinata HOM05D004041 ORTHO05D004564 5.1e-26 124.0 172 48.8
C01p30700 Brassica napus HOM05D004041 ORTHO05D004564 1.9e-25 122.1 143 53.1
Migut.A00845 Erythranthe guttata HOM05D004041 ORTHO05D004564 2.5e-25 121.7 144 50.7
Migut.A00847 Erythranthe guttata HOM05D004041 ORTHO05D004564 2.5e-25 121.7 144 50.7
Dinv09449 Davidia involucrata HOM05D003985 ORTHO05D005253 1.2e-24 119.4 176 45.5
Zm00001eb204730 Zea mays HOM05D004041 ORTHO05D004564 1.2e-24 119.4 105 60.0
Zm00001eb204770 Zea mays HOM05D004041 ORTHO05D004564 6.2e-24 117.1 107 57.9
Zm00001eb204790 Zea mays HOM05D004041 ORTHO05D004564 6.2e-24 117.1 110 59.1
Zm00001eb204800 Zea mays HOM05D004041 ORTHO05D004564 8.1e-24 116.7 107 60.7
Zm00001eb204810 Zea mays HOM05D004041 ORTHO05D004564 1.1e-23 116.3 104 59.6
CANSAT21G2467 Cannabis sativa HOM05D004041 ORTHO05D004564 1.4e-23 115.9 158 48.7
Mapoly0057s0051 Marchantia polymorpha HOM05D004041 ORTHO05D004564 2.4e-23 115.2 119 53.8
Gohir.A06G171302 Gossypium hirsutum HOM05D004041 ORTHO05D004564 3.1e-23 114.8 130 52.3
Zm00001eb204750 Zea mays HOM05D004041 ORTHO05D004564 4.0e-23 114.4 101 59.4
Zm00001eb204820 Zea mays HOM05D004041 ORTHO05D004564 5.2e-23 114.0 105 58.1
TAR626G0117 Trochodendron aralioides HOM05D002987 ORTHO05D003359 8.9e-23 113.2 90 66.7
TPR.G211 Trifolium pratense HOM05D004041 ORTHO05D004564 1.2e-22 112.8 94 63.8
Dinv37476 Davidia involucrata HOM05D000079 ORTHO05D000211 1.5e-22 112.5 177 45.8
Zm00001eb204830 Zea mays HOM05D004041 ORTHO05D004564 1.5e-22 112.5 104 57.7
Ah.11g044190 Amaranthus hybridus HOM05D004041 ORTHO05D004564 9.9e-22 109.8 117 53.0
ATR0665G238 Amborella trichopoda HOM05D004041 ORTHO05D004564 2.2e-21 108.6 107 53.3
Nn8g41252 Nelumbo nucifera HOM05D004041 ORTHO05D004564 3.8e-21 107.8 181 40.3
Gohir.D06G179300 Gossypium hirsutum HOM05D004041 ORTHO05D004564 6.4e-21 107.1 97 59.8
Cpa.g.c48129 Carica papaya HOM05D004041 ORTHO05D004564 1.9e-20 105.5 80 68.8
Carub.0005s1594 Capsella rubella HOM05D004041 ORTHO05D004564 2.4e-20 105.1 210 37.1
Ca_11409_v3 Cicer arietinum L. HOM05D004041 ORTHO05D004564 3.2e-20 104.8 106 61.3
Ca_11411_v3 Cicer arietinum L. HOM05D004041 ORTHO05D004564 7.1e-20 103.6 106 58.5
RcHm_v2.0_Chr4g0410401 Rosa chinensis HOM05D004041 ORTHO05D004564 2.1e-19 102.1 90 57.8
Mapoly0018s0007 Marchantia polymorpha HOM05D004041 ORTHO05D004564 1.7e-18 99.0 114 48.2
SalBow7G2142 Salvia bowleyana HOM05D004041 ORTHO05D004564 3.0e-18 98.2 102 52.0
MCO09G628 Micromonas commoda HOM05D004041 ORTHO05D004564 3.9e-18 97.8 171 39.2
PRCOL_00006922 Prasinoderma coloniale HOM05D004041 ORTHO05D004564 4.3e-17 94.4 111 48.6
Zm00001eb204760 Zea mays HOM05D004041 ORTHO05D004564 3.6e-16 91.3 106 50.0
Manes.07G111004 Manihot esculenta HOM05D004041 ORTHO05D004564 8.1e-16 90.1 105 47.6
Rhsim07G0241300 Rhododendron simsii HOM05D004041 ORTHO05D004564 8.1e-16 90.1 101 50.5
Gorai.010G209300 Gossypium raimondii HOM05D004041 ORTHO05D004564 1.4e-15 89.4 154 44.2
Gorai.010G209900 Gossypium raimondii HOM05D004041 ORTHO05D004564 1.4e-15 89.4 97 54.6
RhsimUnG0236200 Rhododendron simsii HOM05D004041 ORTHO05D004564 5.3e-15 87.4 101 50.5
Cre09.g409200 Chlamydomonas reinhardtii HOM05D004041 ORTHO05D004564 5.8e-14 84.0 145 37.9
Zm00001eb357810 Zea mays HOM05D004041 ORTHO05D004564 5.8e-14 84.0 95 46.3
BolC3t18797H Brassica oleracea HOM05D004041 ORTHO05D004564 2.9e-13 81.6 111 45.0
Cfa024514 Carpinus fangiana HOM05D004041 ORTHO05D004564 2.4e-12 78.6 149 36.9
Dinv19111 Davidia involucrata HOM05D004041 ORTHO05D004564 7.1e-12 77.0 61 67.2
Haze_21676 Corylus avellana HOM05D063909 ORTHO05D004564 6.0e-11 73.9 88 52.3
TPR.G10966 Trifolium pratense HOM05D004041 ORTHO05D004564 2.3e-10 72.0 54 64.8
Gorai.010G211700 Gossypium raimondii HOM05D004041 ORTHO05D004564 3.3e-09 68.2 75 50.7
TPR.G14045 Trifolium pratense HOM05D004041 ORTHO05D004564 2.8e-08 65.1 52 67.3
SGA_v2.0_scaffold7G03771 Striga asiatica HOM05D004041 ORTHO05D004564 3.1e-07 61.6 68 55.9
CARHR261000 Cardamine hirsuta HOM05D004041 ORTHO05D004564 6.9e-07 60.5 68 50.0
BcaC01g02423 Brassica carinata HOM05D004041 ORTHO05D004564 9.0e-07 60.1 93 44.1


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