Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G3951 Erigeron canadensis HOM05D007312 ORTHO05D009209 1.4e-66 256.1 131 100.0
HanXRQChr12g0381571 Helianthus annuus HOM05D007312 ORTHO05D009209 9.5e-55 216.9 131 82.4
Lsat_1_v5_gn_3_106761 Lactuca sativa HOM05D007312 ORTHO05D009209 2.0e-52 209.1 131 82.4
MD05G1250400 Malus domestica HOM05D007312 ORTHO05D009209 1.4e-50 203.0 131 80.9
TWI63G0684 Tripterygium wilfordii HOM05D007312 ORTHO05D009209 6.6e-48 194.1 131 75.6
Hma1.2p1_1005F.1_g246920 Hydrangea macrophylla HOM05D007312 ORTHO05D009209 1.1e-47 193.4 132 78.8
TPR.G38271 Trifolium pratense HOM05D007312 ORTHO05D009209 3.3e-47 191.8 131 76.3
Ca_18754_v3 Cicer arietinum L. HOM05D007312 ORTHO05D009209 5.6e-47 191.0 131 76.3
Atru.chr10.560 Acer truncatum HOM05D007312 ORTHO05D009209 3.6e-46 188.3 131 73.3
Medtr4g084180 Medicago truncatula HOM05D007312 ORTHO05D009209 6.2e-46 187.6 131 74.0
Potri.012G124500 Populus trichocarpa HOM05D007312 ORTHO05D009209 6.2e-46 187.6 131 74.0
CiPaw.09G076400 Carya illinoinensis HOM05D007312 ORTHO05D009209 8.1e-46 187.2 131 72.5
Gohir.A12G046700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 8.1e-46 187.2 131 74.8
Manes.16G055800 Manihot esculenta HOM05D007312 ORTHO05D009209 1.1e-45 186.8 131 74.0
MSTRG.7597 Avicennia marina HOM05D007312 ORTHO05D009209 1.4e-45 186.4 131 74.8
QL11p016282 Quercus lobata HOM05D007312 ORTHO05D009209 4.0e-45 184.9 131 73.3
Sopen02g017880 Solanum pennellii HOM05D007312 ORTHO05D009209 5.2e-45 184.5 131 73.3
PGSC0003DMG400010438 Solanum tuberosum HOM05D007312 ORTHO05D009209 5.2e-45 184.5 131 73.3
CSS0025621 Camellia sinensis var. sinensis HOM05D007312 ORTHO05D009209 6.8e-45 184.1 131 71.0
Eucgr.E04250 Eucalyptus grandis HOM05D007312 ORTHO05D009209 6.8e-45 184.1 136 68.4
Nitab4.5_0007745g0050 Nicotiana tabacum HOM05D007312 ORTHO05D009209 1.5e-44 183.0 131 73.3
CANSAT35G0781 Cannabis sativa HOM05D007312 ORTHO05D009209 2.0e-44 182.6 131 73.3
MELO3C021735.2 Cucumis melo HOM05D007312 ORTHO05D009209 2.0e-44 182.6 128 71.1
Duzib052G0161 Durio zibethinus HOM05D007312 ORTHO05D009209 2.0e-44 182.6 131 71.0
RcHm_v2.0_Chr5g0020311 Rosa chinensis HOM05D007312 ORTHO05D009209 2.6e-44 182.2 131 73.3
BcaB04g18176 Brassica carinata HOM05D007312 ORTHO05D009209 3.4e-44 181.8 127 74.8
ClCG01G009570 Citrullus lanatus HOM05D007312 ORTHO05D009209 4.4e-44 181.4 128 71.1
Nitab4.5_0001288g0230 Nicotiana tabacum HOM05D007312 ORTHO05D009209 7.6e-44 180.6 131 72.5
PGR042G3076 Punica granatum HOM05D007312 ORTHO05D009209 7.6e-44 180.6 131 72.5
Solyc02g068710.3 Solanum lycopersicum HOM05D007312 ORTHO05D009209 7.6e-44 180.6 131 72.5
Cc09_g06000 Coffea canephora HOM05D007312 ORTHO05D009209 9.9e-44 180.3 131 71.8
SalBow8G4543 Salvia bowleyana HOM05D007312 ORTHO05D009209 9.9e-44 180.3 127 72.4
CsaV3_1G046220 Cucumis sativus L. HOM05D007312 ORTHO05D009209 1.3e-43 179.9 128 71.1
GSVIVG01012104001 Vitis vinifera HOM05D007312 ORTHO05D009209 1.3e-43 179.9 131 71.0
Thhalv10009117m.g Eutrema salsugineum HOM05D007312 ORTHO05D009209 1.7e-43 179.5 131 72.5
SGA_v2.0_scaffold298G47689 Striga asiatica HOM05D007312 ORTHO05D009209 1.7e-43 179.5 132 70.5
Zm00001eb375250 Zea mays HOM05D007312 ORTHO05D009209 1.7e-43 179.5 116 75.0
CARHR030640 Cardamine hirsuta HOM05D007312 ORTHO05D009209 3.8e-43 178.3 131 74.0
Os06g0174300 Oryza sativa ssp. japonica HOM05D007312 ORTHO05D009209 3.8e-43 178.3 116 75.0
VMungo0251G1106 Vigna mungo HOM05D007312 ORTHO05D009209 4.9e-43 177.9 131 69.5
Ah.01g020500 Amaranthus hybridus HOM05D007312 ORTHO05D009209 6.4e-43 177.6 126 74.6
BcaC07g37774 Brassica carinata HOM05D007312 ORTHO05D009209 8.4e-43 177.2 127 75.6
AL1G49340 Arabidopsis lyrata HOM05D007312 ORTHO05D009209 1.1e-42 176.8 131 72.5
AT1G31170 Arabidopsis thaliana HOM05D007312 ORTHO05D009209 1.1e-42 176.8 131 72.5
Peaxi162Scf00149g00224 Petunia axillaris HOM05D007312 ORTHO05D009209 1.4e-42 176.4 131 71.0
Actinidia22408 Actinidia chinensis HOM05D007312 ORTHO05D009209 1.9e-42 176.0 131 71.8
EL10Ac5g12681 Beta vulgaris HOM05D007312 ORTHO05D009209 2.4e-42 175.6 131 71.0
Ciclev10017175m.g Citrus clementina HOM05D007312 ORTHO05D009209 2.4e-42 175.6 132 69.7
MBI18_g11473_MAGBIO Magnolia biondii HOM05D007312 ORTHO05D009209 2.4e-42 175.6 115 76.5
Sp1g26990 Schrenkiella parvula HOM05D007312 ORTHO05D009209 2.4e-42 175.6 127 74.8
Phvul.002G097300 Phaseolus vulgaris HOM05D007312 ORTHO05D009209 5.4e-42 174.5 131 67.9
Carub.0001s2957 Capsella rubella HOM05D007312 ORTHO05D009209 7.1e-42 174.1 127 73.2
Lj2A350T56 Lonicera japonica HOM05D007312 ORTHO05D009209 1.2e-41 173.3 126 70.6
Sabra12G0094300 Salix brachista HOM05D007312 ORTHO05D009209 1.2e-41 173.3 126 72.2
FvH4_3g12430 Fragaria vesca HOM05D007312 ORTHO05D009209 2.7e-41 172.2 126 71.4
PSO541G3426 Papaver somniferum HOM05D007312 ORTHO05D009209 3.5e-41 171.8 108 75.9
unitig_32.g10991 Utricularia gibba HOM05D000532 ORTHO05D009209 4.6e-41 171.4 97 80.4
TAR624G0630 Trochodendron aralioides HOM05D007312 ORTHO05D009209 6.0e-41 171.0 131 71.0
Psat7g129800 Pisum sativum HOM05D007312 ORTHO05D009209 1.0e-40 170.2 121 76.0
Glyma.20G019100 Glycine max HOM05D007312 ORTHO05D009209 1.3e-40 169.9 131 69.5
Lj4g0021225 Lotus japonicus HOM05D007312 ORTHO05D009209 3.9e-40 168.3 131 68.7
RhsimUnG0109200 Rhododendron simsii HOM05D007312 ORTHO05D009209 3.9e-40 168.3 126 70.6
vmacro03527 Vaccinium macrocarpon HOM05D007312 ORTHO05D009209 5.1e-40 167.9 87 89.7
BolC8t48163H Brassica oleracea HOM05D007312 ORTHO05D009209 6.6e-40 167.5 122 74.6
Lalb_Chr16g0385171 Lupinus albus HOM05D007312 ORTHO05D009209 1.1e-39 166.8 131 67.2
Hund14701 Selenicereus undatus HOM05D007312 ORTHO05D009209 1.5e-39 166.4 129 68.2
Rhsim13G0146500 Rhododendron simsii HOM05D007312 ORTHO05D009209 2.5e-39 165.6 126 69.8
A08p10710 Brassica napus HOM05D007312 ORTHO05D009209 7.3e-39 164.1 123 72.4
BraA08t33069Z Brassica rapa HOM05D007312 ORTHO05D009209 7.3e-39 164.1 123 72.4
AUR62010557 Chenopodium quinoa HOM05D007312 ORTHO05D009209 9.6e-39 163.7 126 67.5
Migut.M01988 Erythranthe guttata HOM05D007312 ORTHO05D009209 9.6e-39 163.7 106 76.4
Aa31LG2G15110 Aethionema arabicum HOM05D007312 ORTHO05D009209 1.6e-38 162.9 110 73.6
arahy.Tifrunner.gnm1.ann1.XDA00H Arachis hypogaea HOM05D007312 ORTHO05D009209 4.8e-38 161.4 126 67.5
CDE02G1125 Ceratophyllum demersum HOM05D007312 ORTHO05D009209 4.8e-38 161.4 134 64.9
arahy.Tifrunner.gnm1.ann1.FJ5394 Arachis hypogaea HOM05D007312 ORTHO05D009209 2.4e-37 159.1 103 77.7
THA.LOC104798553 Tarenaya hassleriana HOM05D007312 ORTHO05D009209 4.0e-37 158.3 131 61.8
CAN.G149.9 Capsicum annuum HOM05D007312 ORTHO05D009209 5.3e-37 157.9 102 76.5
AUR62017332 Chenopodium quinoa HOM05D007312 ORTHO05D009209 1.2e-36 156.8 126 65.9
Aqoxy1G01718 Aquilegia oxysepala HOM05D007312 ORTHO05D009209 2.0e-36 156.0 124 67.7
Pp3c7_15740 Physcomitrium patens HOM05D007312 ORTHO05D009209 2.6e-36 155.6 131 60.3
HPP92_010212 Vanilla planifolia HOM05D007312 ORTHO05D009209 7.6e-36 154.1 126 66.7
Haze_06075 Corylus avellana HOM05D007312 ORTHO05D009209 9.9e-36 153.7 126 65.1
SMO145G0246 Selaginella moellendorffii HOM05D007312 ORTHO05D009209 9.9e-36 153.7 85 82.4
Nn7g38246 Nelumbo nucifera HOM05D007312 ORTHO05D009209 1.6e-33 146.4 131 65.6
Mapoly0066s0018 Marchantia polymorpha HOM05D007312 ORTHO05D009209 1.1e-29 133.7 179 46.9
CBR_g4 Chara braunii HOM05D007312 ORTHO05D009209 1.8e-29 132.9 91 67.0
RcHm_v2.0_Chr2g0126261 Rosa chinensis HOM05D007312 ORTHO05D009209 1.8e-29 132.9 99 67.7
Prupe.4G113200 Prunus persica HOM05D007312 ORTHO05D009209 1.3e-27 126.7 97 71.1
Cre17.g729950 Chlamydomonas reinhardtii HOM05D007312 ORTHO05D009209 1.7e-27 126.3 108 58.3
HPP92_010191 Vanilla planifolia HOM05D007312 ORTHO05D009209 3.3e-23 112.1 131 54.2
Dinv25919 Davidia involucrata HOM05D007312 ORTHO05D009209 2.1e-22 109.4 95 67.4
Oeu056034.1 Olea europaea HOM05D007312 ORTHO05D009209 1.8e-21 106.3 93 64.5
FAN25G0614 Fragaria x ananassa HOM05D007312 ORTHO05D009209 6.9e-21 104.4 97 64.9
Gorai.008G048300 Gossypium raimondii HOM05D007312 ORTHO05D009209 2.7e-17 92.4 84 65.5
Gohir.D12G045700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 1.0e-16 90.5 84 64.3
Sed0015339 Sechium edule HOM05D007312 ORTHO05D009209 2.3e-16 89.4 81 61.7
Sc01g0008940 Simmondsia chinensis HOM05D007312 ORTHO05D009209 2.3e-16 89.4 86 62.8
Thecc.02G008700 Theobroma cacao HOM05D007312 ORTHO05D009209 3.0e-16 89.0 89 58.4
ATR0752G167 Amborella trichopoda HOM05D007312 ORTHO05D009209 5.7e-15 84.7 78 56.4
FAN16G3369 Fragaria x ananassa HOM05D007312 ORTHO05D009209 5.7e-15 84.7 83 60.2
FAN21G0246 Fragaria x ananassa HOM05D007312 ORTHO05D009209 9.6e-15 84.0 86 57.0
Lalb_Chr09g0328681 Lupinus albus HOM05D007312 ORTHO05D009209 1.6e-14 83.2 41 85.4
Cpa.g.sc5085.1 Carica papaya HOM05D007312 ORTHO05D009209 1.4e-13 80.1 83 56.6
COL.COLO4_17652 Corchorus olitorius HOM05D007312 ORTHO05D009209 4.1e-13 78.6 62 61.3
Sabra12G0063500 Salix brachista HOM05D007312 ORTHO05D009209 1.3e-11 73.6 78 56.4
Potri.015G124601 Populus trichocarpa HOM05D007312 ORTHO05D009209 8.7e-08 60.8 42 64.3
Lalb_Chr09g0328671 Lupinus albus HOM05D007312 ORTHO05D009209 3.7e-06 55.5 87 44.8


User provided reference genes

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