Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 4.9e-233 810.8 431 100.0
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 1.4e-123 447.2 448 62.7
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 7.6e-109 398.3 449 59.7
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 4.6e-82 309.3 431 49.7
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 2.3e-65 253.8 459 47.1
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 3.0e-65 253.4 457 45.5
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.0e-60 238.4 459 43.8
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 8.5e-60 235.3 404 43.1
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 3.2e-59 233.4 458 44.1
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 2.3e-57 227.3 463 43.2
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 1.3e-55 221.5 449 39.2
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 7.0e-54 215.7 465 41.5
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 5.9e-53 212.6 444 40.3
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 3.8e-52 209.9 307 48.9
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 5.0e-52 209.5 410 41.2
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 2.5e-51 207.2 422 42.2
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 4.2e-51 206.5 403 40.7
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 9.4e-51 205.3 494 39.5
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 4.7e-50 203.0 428 42.1
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 6.1e-50 202.6 472 37.5
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 8.0e-50 202.2 492 40.4
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 5.4e-46 189.5 466 38.0
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 7.7e-45 185.7 442 38.2
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 2.3e-44 184.1 449 40.1
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 3.3e-43 180.3 441 39.0
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 4.2e-43 179.9 343 42.0
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 1.6e-42 177.9 439 37.8
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 2.1e-42 177.6 475 36.8
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 2.1e-42 177.6 451 37.9
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 4.7e-42 176.4 260 43.8
ECA236G3415 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.4e-41 174.9 300 41.3
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 1.4e-41 174.9 402 39.1
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.8e-41 174.5 230 50.4
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 4.0e-41 173.3 412 37.9
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.5e-40 171.4 430 36.3
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.5e-40 171.4 436 37.2
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.0e-40 171.0 438 35.6
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.0e-40 171.0 411 38.7
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 3.4e-40 170.2 476 35.5
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 5.7e-40 169.5 476 33.2
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 2.9e-39 167.2 437 36.4
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 4.9e-39 166.4 466 38.0
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 4.9e-39 166.4 480 32.5
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 3.2e-38 163.7 434 37.1
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.1e-38 163.3 464 39.4
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.7e-37 160.6 443 35.0
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 4.6e-37 159.8 429 37.5
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 7.8e-37 159.1 439 34.9
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 2.3e-36 157.5 425 36.2
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 3.9e-36 156.8 462 36.1
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 5.0e-36 156.4 431 36.7
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 8.6e-36 155.6 424 37.7
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 1.9e-35 154.5 452 35.8
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 1.9e-35 154.5 405 33.6
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 1.9e-35 154.5 425 36.9
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 4.3e-35 153.3 415 36.1
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 5.6e-35 152.9 467 33.8
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 1.6e-34 151.4 427 36.1
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 1.4e-33 148.3 453 34.2
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 5.2e-33 146.4 451 36.1
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 6.8e-33 146.0 457 35.0
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 3.4e-32 143.7 476 35.1
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 5.8e-32 142.9 405 33.1
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 5.8e-32 142.9 401 33.4
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.2e-31 141.0 444 32.9
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 4.9e-31 139.8 345 37.1
Lsat_1_v5_gn_7_103061 Lactuca sativa HOM05D006105 ORTHO05D006345 8.3e-31 139.0 432 34.3
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 1.4e-30 138.3 454 33.0
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 1.4e-30 138.3 457 34.4
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 2.4e-30 137.5 387 34.4
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 3.2e-30 137.1 460 33.5
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 7.0e-30 136.0 341 34.9
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 7.0e-30 136.0 430 33.3
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 9.2e-30 135.6 419 35.6
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 2.7e-29 134.0 271 40.2
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.3e-28 131.7 448 34.4
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 1.9e-27 127.9 454 39.0
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 2.5e-27 127.5 417 33.8
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 9.5e-27 125.6 431 33.9
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 1.2e-26 125.2 217 42.9
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 2.8e-26 124.0 420 31.9
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 8.1e-26 122.5 475 33.7
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 1.1e-25 122.1 427 33.3
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 3.1e-25 120.6 416 34.1
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 4.0e-25 120.2 431 33.4
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 4.0e-25 120.2 439 33.7
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 8.9e-25 119.0 464 32.1
PGSC0003DMG400012397 Solanum tuberosum HOM05D006105 ORTHO05D006345 9.8e-24 115.5 208 39.4
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 1.3e-23 115.2 467 35.3
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 8.3e-23 112.5 433 33.0
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 4.1e-22 110.2 468 31.0
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 7.1e-22 109.4 441 31.5
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 9.2e-22 109.0 462 31.6
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 2.7e-21 107.5 431 32.3
Sopen10g003350 Solanum pennellii HOM05D016660 ORTHO05D006345 6.0e-21 106.3 203 37.9
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 1.3e-20 105.1 428 32.2
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.3e-20 104.4 400 34.5
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.3e-20 104.4 407 28.3
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 1.5e-19 101.7 400 33.8
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 7.3e-19 99.4 292 37.0
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 9.5e-19 99.0 418 34.4
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 2.1e-18 97.8 427 33.3
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 8.1e-18 95.9 421 29.7
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 1.1e-17 95.5 411 31.9
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 1.1e-17 95.5 463 32.0
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 1.8e-17 94.7 424 31.4
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 1.8e-17 94.7 441 31.5
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 1.2e-16 92.0 424 31.6
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 4.4e-16 90.1 426 31.9
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 1.3e-15 88.6 313 33.2
Solyc10g007156.2 Solanum lycopersicum HOM05D016660 ORTHO05D006345 1.3e-15 88.6 180 35.0
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 2.2e-15 87.8 404 30.0
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 2.2e-15 87.8 349 33.5
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 2.9e-15 87.4 409 29.1
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 3.2e-14 84.0 419 27.9
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 4.1e-14 83.6 423 29.8
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 1.2e-13 82.0 452 29.4
HanXRQChr17g0545011 Helianthus annuus HOM05D006105 ORTHO05D006345 1.6e-13 81.6 175 38.3
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 1.0e-12 79.0 331 32.0
CANSAT35G1552 Cannabis sativa HOM05D006105 ORTHO05D006345 1.3e-12 78.6 224 32.6
Oeu051102.1 Olea europaea HOM05D006105 ORTHO05D006345 2.3e-12 77.8 104 45.2
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 3.0e-12 77.4 431 28.1
Gohir.A13G148200 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.5e-11 74.3 311 30.9
Aqoxy4G00493 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 4.3e-11 73.6 457 26.9
Nn1g04330 Nelumbo nucifera HOM05D006105 ORTHO05D006345 9.6e-11 72.4 259 34.7
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 1.2e-10 72.0 447 27.3
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 1.6e-10 71.6 416 25.5
VMungo1127G1756 Vigna mungo HOM05D006105 ORTHO05D006345 2.1e-10 71.2 228 32.5
SEGI_16969 Sequoiadendron giganteum HOM05D016559 ORTHO05D019650 2.9e-07 60.8 287 30.3
TAR627G0886 Trochodendron aralioides HOM05D000157 ORTHO05D006345 3.8e-07 60.5 240 31.7
Migut.H01972 Erythranthe guttata HOM05D006105 ORTHO05D006345 6.4e-07 59.7 183 31.1
Phvul.011G157100 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 5.4e-06 56.6 312 30.1
Glyma.06G232800 Glycine max HOM05D006105 ORTHO05D006345 7.1e-06 56.2 301 27.9


User provided reference genes

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