Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA234G3840 Erigeron canadensis HOM05D005031 ORTHO05D006098 1.1e-90 336.7 174 100.0
HanXRQChr10g0307831 Helianthus annuus HOM05D005031 ORTHO05D006098 5.5e-82 307.8 174 89.1
Hma1.2p1_2290F.1_g319050 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 5.9e-68 261.2 174 70.1
Lsat_1_v5_gn_5_88201 Lactuca sativa HOM05D005031 ORTHO05D006098 3.8e-67 258.5 176 72.7
Medtr4g130180 Medicago truncatula HOM05D005031 ORTHO05D006098 1.6e-65 253.1 174 71.3
TWI73G0469 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 4.6e-65 251.5 174 70.7
Oeu045637.1 Olea europaea HOM05D005031 ORTHO05D006098 7.9e-65 250.8 174 67.8
Hma1.2p1_1493F.1_g286836 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 1.0e-64 250.4 174 66.1
Ciclev10012924m.g Citrus clementina HOM05D005031 ORTHO05D006098 1.8e-64 249.6 174 70.1
Thecc.09G157500 Theobroma cacao HOM05D005031 ORTHO05D006098 1.8e-64 249.6 174 70.1
Ca_21160_v3 Cicer arietinum L. HOM05D005031 ORTHO05D006098 6.7e-64 247.7 174 69.0
COL.COLO4_10074 Corchorus olitorius HOM05D005031 ORTHO05D006098 1.9e-63 246.1 174 70.7
Duzib168G1565 Durio zibethinus HOM05D005031 ORTHO05D006098 2.5e-63 245.7 174 69.0
Lj6g0018969 Lotus japonicus HOM05D005031 ORTHO05D006098 2.5e-63 245.7 174 67.2
RcHm_v2.0_Chr4g0405231 Rosa chinensis HOM05D005031 ORTHO05D006098 2.5e-63 245.7 174 67.8
Oeu031856.2 Olea europaea HOM05D005031 ORTHO05D006098 3.3e-63 245.4 174 66.7
CiPaw.06G050600 Carya illinoinensis HOM05D005031 ORTHO05D006098 4.3e-63 245.0 174 73.6
Phvul.003G152700 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 4.3e-63 245.0 174 69.5
VMungo1215G0734 Vigna mungo HOM05D005031 ORTHO05D006098 4.3e-63 245.0 174 69.5
Potri.018G101100 Populus trichocarpa HOM05D005031 ORTHO05D006098 5.7e-63 244.6 174 68.4
TPR.G1244 Trifolium pratense HOM05D005031 ORTHO05D006098 5.7e-63 244.6 174 68.4
CAN.G1190.6 Capsicum annuum HOM05D005031 ORTHO05D006098 7.4e-63 244.2 174 68.4
Phvul.010G125500 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 9.7e-63 243.8 174 69.0
Solyc07g006150.3 Solanum lycopersicum HOM05D005031 ORTHO05D006098 1.3e-62 243.4 174 72.4
Sopen07g002260 Solanum pennellii HOM05D005031 ORTHO05D006098 1.3e-62 243.4 174 72.4
arahy.Tifrunner.gnm1.ann1.QFVN2V Arachis hypogaea HOM05D005031 ORTHO05D006098 1.7e-62 243.0 174 68.4
PGSC0003DMG400011218 Solanum tuberosum HOM05D005031 ORTHO05D006098 1.7e-62 243.0 174 71.8
Gohir.D08G098400 Gossypium hirsutum HOM05D005031 ORTHO05D006098 2.2e-62 242.7 174 67.2
Prupe.1G100400 Prunus persica HOM05D005031 ORTHO05D006098 2.2e-62 242.7 174 66.1
Duzib187G1655 Durio zibethinus HOM05D005031 ORTHO05D006098 2.8e-62 242.3 174 67.8
TAR636G0261 Trochodendron aralioides HOM05D005031 ORTHO05D006098 3.7e-62 241.9 171 71.9
Gohir.A08G087500 Gossypium hirsutum HOM05D005031 ORTHO05D006098 6.3e-62 241.1 174 66.7
MELO3C004109.2 Cucumis melo HOM05D005031 ORTHO05D006098 8.2e-62 240.7 174 71.3
Duzib187G0728 Durio zibethinus HOM05D005031 ORTHO05D006098 8.2e-62 240.7 174 67.2
Gorai.004G106100 Gossypium raimondii HOM05D005031 ORTHO05D006098 8.2e-62 240.7 174 66.7
Lalb_Chr07g0180011 Lupinus albus HOM05D005031 ORTHO05D006098 8.2e-62 240.7 175 66.9
Hund18050 Selenicereus undatus HOM05D005031 ORTHO05D006098 8.2e-62 240.7 174 66.7
Glyma.02G207700 Glycine max HOM05D005031 ORTHO05D006098 1.4e-61 240.0 174 68.4
Nn8g40193 Nelumbo nucifera HOM05D005031 ORTHO05D006098 1.4e-61 240.0 174 67.8
ClCG11G012690 Citrullus lanatus HOM05D005031 ORTHO05D006098 1.8e-61 239.6 174 71.8
Sed0023985 Sechium edule HOM05D005031 ORTHO05D006098 1.8e-61 239.6 174 69.0
vmacro01000 Vaccinium macrocarpon HOM05D005031 ORTHO05D006098 1.8e-61 239.6 174 74.1
GSVIVG01033204001 Vitis vinifera HOM05D005031 ORTHO05D006098 1.8e-61 239.6 174 68.4
Hma1.2p1_2438F.1_g322190 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 2.4e-61 239.2 151 71.5
Lj4g0007960 Lotus japonicus HOM05D005031 ORTHO05D006098 2.4e-61 239.2 175 67.4
FvH4_3g25860 Fragaria vesca HOM05D005031 ORTHO05D006098 4.1e-61 238.4 174 64.9
FAN11G2096 Fragaria x ananassa HOM05D005031 ORTHO05D006098 4.1e-61 238.4 174 64.9
Glyma.17G070000 Glycine max HOM05D005031 ORTHO05D006098 4.1e-61 238.4 174 67.8
MD00G1059200 Malus domestica HOM05D005031 ORTHO05D006098 4.1e-61 238.4 174 65.5
FAN21G1649 Fragaria x ananassa HOM05D005031 ORTHO05D006098 6.9e-61 237.7 174 64.9
FAN25G2017 Fragaria x ananassa HOM05D005031 ORTHO05D006098 6.9e-61 237.7 174 64.9
Manes.06G033000 Manihot esculenta HOM05D005031 ORTHO05D006098 6.9e-61 237.7 174 70.1
Peaxi162Scf00038g00324 Petunia axillaris HOM05D005031 ORTHO05D006098 6.9e-61 237.7 174 66.7
SalBow1G8617 Salvia bowleyana HOM05D005031 ORTHO05D006098 9.1e-61 237.3 174 70.1
CsaV3_2G007780 Cucumis sativus L. HOM05D005031 ORTHO05D006098 1.2e-60 236.9 174 66.7
Nitab4.5_0001036g0100 Nicotiana tabacum HOM05D005031 ORTHO05D006098 1.5e-60 236.5 174 71.3
PGR031G2537 Punica granatum HOM05D005031 ORTHO05D006098 2.6e-60 235.7 174 65.5
EL10Ac7g17961 Beta vulgaris HOM05D005031 ORTHO05D006098 7.7e-60 234.2 174 63.8
RcHm_v2.0_Chr5g0047191 Rosa chinensis HOM05D005031 ORTHO05D006098 7.7e-60 234.2 174 63.8
Nitab4.5_0002545g0040 Nicotiana tabacum HOM05D005031 ORTHO05D006098 1.3e-59 233.4 174 70.1
CANSAT11G2524 Cannabis sativa HOM05D005031 ORTHO05D006098 3.8e-59 231.9 174 66.7
MD00G1091200 Malus domestica HOM05D005031 ORTHO05D006098 5.0e-59 231.5 174 64.4
PSO478G0084 Papaver somniferum HOM05D005031 ORTHO05D006098 6.5e-59 231.1 174 66.1
PSO017G4787 Papaver somniferum HOM05D005031 ORTHO05D006098 1.1e-58 230.3 174 66.1
Sp7g28380 Schrenkiella parvula HOM05D005031 ORTHO05D006098 1.4e-58 229.9 174 64.4
Carub.0004s0310 Capsella rubella HOM05D005031 ORTHO05D006098 1.9e-58 229.6 174 62.6
AL4G13970 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 2.5e-58 229.2 174 64.4
Atru.chr12.1707 Acer truncatum HOM05D005031 ORTHO05D006098 4.2e-58 228.4 174 68.4
BcaNung00560 Brassica carinata HOM05D005031 ORTHO05D006098 4.2e-58 228.4 174 63.2
BcaNung00561 Brassica carinata HOM05D005031 ORTHO05D006098 4.2e-58 228.4 174 63.2
C01p08550 Brassica napus HOM05D005031 ORTHO05D006098 4.2e-58 228.4 174 63.8
C07p57970 Brassica napus HOM05D005031 ORTHO05D006098 4.2e-58 228.4 174 63.2
BolC7t46255H Brassica oleracea HOM05D005031 ORTHO05D006098 4.2e-58 228.4 174 63.2
AT2G23940 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 5.5e-58 228.0 174 63.8
Cc06_g14310 Coffea canephora HOM05D005031 ORTHO05D006098 5.5e-58 228.0 174 67.8
Thhalv10026393m.g Eutrema salsugineum HOM05D005031 ORTHO05D006098 5.5e-58 228.0 174 63.2
SGA_v2.0_scaffold12G06032 Striga asiatica HOM05D005031 ORTHO05D006098 7.2e-58 227.6 174 69.5
A03p59910 Brassica napus HOM05D005031 ORTHO05D006098 9.4e-58 227.3 174 63.2
ATR0580G158 Amborella trichopoda HOM05D005031 ORTHO05D006098 1.6e-57 226.5 174 62.6
Migut.K00291 Erythranthe guttata HOM05D005031 ORTHO05D006098 1.6e-57 226.5 174 68.4
Eucgr.H00166 Eucalyptus grandis HOM05D005031 ORTHO05D006098 1.6e-57 226.5 174 62.1
Sabra18G0087000 Salix brachista HOM05D005031 ORTHO05D006098 1.6e-57 226.5 194 60.3
HPP92_025776 Vanilla planifolia HOM05D005031 ORTHO05D006098 1.6e-57 226.5 174 64.4
Actinidia38656 Actinidia chinensis HOM05D005031 ORTHO05D006098 2.1e-57 226.1 174 67.8
BraA03t15048Z Brassica rapa HOM05D005031 ORTHO05D006098 2.1e-57 226.1 174 62.6
Aqoxy5G00990 Aquilegia oxysepala HOM05D005031 ORTHO05D006098 3.6e-57 225.3 171 68.4
CDE05G2574 Ceratophyllum demersum HOM05D005031 ORTHO05D006098 7.9e-57 224.2 174 62.1
PSO675G4517 Papaver somniferum HOM05D005031 ORTHO05D006098 7.9e-57 224.2 174 63.8
arahy.Tifrunner.gnm1.ann1.0TL0BP Arachis hypogaea HOM05D005031 ORTHO05D006098 1.0e-56 223.8 198 58.6
Aa31LG2G20010 Aethionema arabicum HOM05D005031 ORTHO05D006098 1.8e-56 223.0 174 62.6
BcaC09g51840 Brassica carinata HOM05D005031 ORTHO05D006098 3.0e-56 222.2 174 62.6
A01p07680 Brassica napus HOM05D005031 ORTHO05D006098 3.0e-56 222.2 171 62.6
BraA01t00711Z Brassica rapa HOM05D005031 ORTHO05D006098 3.0e-56 222.2 171 62.6
Actinidia33308 Actinidia chinensis HOM05D005031 ORTHO05D006098 3.9e-56 221.9 174 67.8
BolC1t00831H Brassica oleracea HOM05D005031 ORTHO05D006098 8.8e-56 220.7 166 63.9
BolC1t00837H Brassica oleracea HOM05D005031 ORTHO05D006098 8.8e-56 220.7 166 63.9
CARHR184610 Cardamine hirsuta HOM05D005031 ORTHO05D006098 2.0e-55 219.5 166 63.9
QL01p011713 Quercus lobata HOM05D005031 ORTHO05D006098 2.0e-55 219.5 173 66.5
TWI23G1034 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 2.0e-55 219.5 155 68.4
AL7G21640 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 3.3e-55 218.8 174 62.6
MSTRG.10716 Avicennia marina HOM05D005031 ORTHO05D006098 9.7e-55 217.2 174 65.5
THA.LOC104819960 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 1.3e-54 216.9 174 59.2
Dinv41325 Davidia involucrata HOM05D005031 ORTHO05D006098 2.2e-54 216.1 174 64.4
Atru.chr12.1715 Acer truncatum HOM05D005031 ORTHO05D006098 8.2e-54 214.2 143 69.2
BolC1t00834H Brassica oleracea HOM05D005031 ORTHO05D006098 8.2e-54 214.2 151 66.9
Zm00001eb186920 Zea mays HOM05D005031 ORTHO05D006098 1.1e-53 213.8 175 61.7
THA.LOC104803530 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 3.1e-53 212.2 174 59.2
Rhsim03G0261100 Rhododendron simsii HOM05D005031 ORTHO05D006098 4.1e-53 211.8 196 60.2
AT4G30500 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 2.0e-52 209.5 174 60.9
CSS0024126 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 3.8e-51 205.3 171 62.6
CSS0012616 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 5.0e-51 204.9 171 62.6
Hma1.2p1_2725F.1_g327560 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 4.2e-50 201.8 122 76.2
MBI14_g16418_MAGBIO Magnolia biondii HOM05D005031 ORTHO05D006098 2.1e-49 199.5 146 67.1
Rhsim03G0260600 Rhododendron simsii HOM05D005031 ORTHO05D006098 8.0e-49 197.6 239 49.8
Sed0023066 Sechium edule HOM05D005031 ORTHO05D006098 2.2e-46 189.5 147 65.3
AagrBONN_evm.TU.Sc2ySwM_368.3216 Anthoceros agrestis HOM05D005031 ORTHO05D006098 1.8e-45 186.4 171 53.8
Sc05g0001840 Simmondsia chinensis HOM05D005031 ORTHO05D006098 7.0e-45 184.5 122 68.9
AUR62001168 Chenopodium quinoa HOM05D005031 ORTHO05D006098 1.2e-44 183.7 182 57.1
Psat0s2826g0160 Pisum sativum HOM05D005031 ORTHO05D006098 2.0e-44 183.0 122 69.7
Os02g0666800 Oryza sativa ssp. japonica HOM05D005031 ORTHO05D006098 5.0e-43 178.3 175 53.7
SMO164G0234 Selaginella moellendorffii HOM05D005031 ORTHO05D006098 2.6e-39 166.0 176 52.3
CBR_g3690 Chara braunii HOM05D005031 ORTHO05D006098 4.8e-38 161.8 173 45.1
Mapoly0003s0226 Marchantia polymorpha HOM05D005031 ORTHO05D006098 8.2e-38 161.0 174 48.3
Pp3c11_17250 Physcomitrium patens HOM05D005031 ORTHO05D006098 9.1e-37 157.5 173 48.6
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 5.0e-35 151.8 94 71.3
Haze_21256 Corylus avellana HOM05D005031 ORTHO05D006098 1.6e-33 146.7 95 69.5
Ah.08g218880 Amaranthus hybridus HOM05D005031 ORTHO05D006098 3.6e-33 145.6 94 69.1
Cpa.g.sc743.3 Carica papaya HOM05D005031 ORTHO05D006098 1.8e-29 133.3 93 63.4
BcaNung01743 Brassica carinata HOM05D005031 ORTHO05D006098 5.2e-24 115.2 85 62.4
Lj7A465G52 Lonicera japonica HOM05D005031 ORTHO05D006098 1.3e-22 110.5 81 61.7
BcaB04g19089 Brassica carinata HOM05D005031 ORTHO05D006098 5.4e-21 105.1 75 62.7
CARHR238390 Cardamine hirsuta HOM05D005031 ORTHO05D006098 2.0e-20 103.2 96 50.0
unitig_62.g23488 Utricularia gibba HOM05D005031 ORTHO05D006098 7.8e-20 101.3 85 67.1
BcaB08g34788 Brassica carinata HOM05D005031 ORTHO05D006098 5.0e-19 98.6 127 44.9
MELO3C020438.2 Cucumis melo HOM05D005031 ORTHO05D006098 3.3e-18 95.9 55 76.4
PRCOL_00004780 Prasinoderma coloniale HOM05D005031 ORTHO05D006098 7.3e-18 94.7 177 31.6
MELO3C010414.2 Cucumis melo HOM05D005031 ORTHO05D006098 8.0e-17 91.3 50 80.0
MCO15G043 Micromonas commoda HOM05D005031 ORTHO05D006098 1.0e-16 90.9 133 37.6
Cre02.g096850 Chlamydomonas reinhardtii HOM05D005031 ORTHO05D006098 1.8e-16 90.1 129 39.5
MELO3C032992.2 Cucumis melo HOM05D005031 ORTHO05D006098 3.4e-15 85.9 48 79.2
Rhsim03G0261000 Rhododendron simsii HOM05D005031 ORTHO05D006098 4.9e-14 82.0 81 55.6
MELO3C033057.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.0e-11 74.3 38 84.2


User provided reference genes

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